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Oryza sativa
cluster # 6668 cluster # 6668       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6668#0 length = 2435 sequences # 2  
consensus_6668#1 length = 591 sequences # 1  
consensus_6668#2 length = 584 sequences # 1  

consensusID : consensus_6668#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2435
fasta sequence
                              [ATCTGATTACTCCGCGGCGGCGGCGGCGGCGGGAGCGGCATCTCCTACGAGATTCCTCTCTTGATGGTATCGTTGAACAAGCCAACTAAGCACAAGGAGTTGTCTCGGGTGATGAGATAATTTGGTTAAGGAAGGTAGGAAACAGTAAATTCAATGGGCAATCCTTCTATTCTCACGGAGGATTTAGGCGATACGTCTGACTTTGAGGTTGATGGCGTCGAGAACCTCACGGAGAATGATGTCAGTGATGAGGAGATTGATGCCGAGGAGCTGGCCCGACGGATGTGGAAAGACAAGATCAAGCTGAAGAGGATCAAGGAGAGGCAGCAGAAGCTTGCTCTGCAGCAGGCAGCACTAGAGGAGTCCAAAACAAAGAAGATGTCTGAGCAGGCTCTCCGCAAGAAGACGGCGAGAGTCCAGGATGGGATCTTGAGGTACATGCTCAAGCTGATGGAGGTGTGCAATGCTCGTGGGTTTGTTTATGGGATCATTCCTCATAAAGGGAAGCCTGTCAGTGGTGCATCGGATAACATTAGAGCTTGGTGGAAGGAGAAGGTTCGGTTCGATGTGAATGGGCCGGTTGCCATTGCAAAGTATGAGGTTAAGAACTCAATGCTGGTTGATGCTAAGCGCAGAGGGGTCTTGAACCAGCATAGCTTGATGGATCTCCAGGATGCTACCCTGGGATCATTGCTCTCATCGTTGATGCAGCATTGCAGCCCGCAGCAGCGCAAGTACCCACTGGATAAGGGTGTCCCTCCCCCATGGTGGCCATCAGGAAATGAGGATTGGTGGATTTCTTTAGGCCTTCCAATGGGAATATCACCACCATACAGAAAACCGCATGATCTTAAGAAGGTTTGGAAGGTTGGCGTGCTGACGGGTGTGATCAAACACATGGCCCCAAACTTTGATAAGATCAGGAATTGTGTAAGGAAATCGAAGTGCTTGCAAGACAAAATGACTGCTAAAGAGAGCTTGATTTGGCTGGGAGTTCTTCGAAGAGAGGAAATATATTTTCGCAGTTCTGACAATGTTGGATCACAGATTACACACCGTAGTTCTCGTGAGGGAAAAAGTGATGATATATATAGCAGCAGTGATGAGTATGATGTCGACCATTTGGAGGAACCTCCTCGCTCTTCATCATCCAAAGATAATGTGGGGCGTCGTCAGCCAACTGCGCAGATCAGAGAGGAGCATACCTCTAGTCGACACAACAGAGGACGCCATGATCAGCAACCCAATCAAGTACTTCCTAGCAATGAAGGGACCAATGAATCAAGGAAGAGAAAGAGACCTAGTGGTCATTTACTTACTGCTGAATCTGAGGTTGAGGTAACACAAAAAGATGACAATCAACTAGCCATTGTGAGCAATGCATTGCCCAATATGAGCAGAATAAACCAAACGGAGATGATGGGCATGGCTAACCAGATGACAAGCCTCAGCCATGTCAATACAACTGAAACTCTACAGCATCAATATGTTCAAGGGAACTTCGTATCTTCTCCTGCTGCTGTGGTTAATAACTATAACAGCAACCAGATTACAAATGTTAATCCTTCAAGGATTTATATGGGATATCAGCCTTTAGCATGCCAAAATAATGGTCACACAAATCCATGGTCTGAAGACACTTTTCAGGTTGATGTTGGTCCACCACCTATTGGTTTTACTACTAATTCTTCGTCAGGTGGTAATCATTCTTTTCCCATGAAACAATCACTACCAAAATCTATAGATGATCATGTGCCTATTACGGAGACAGGGGTGTTGGCTGATAGCAGTTCATATGGTTATCATATCACAGCCACAGGTAGTAGGAATTCAACCTCTGTTGCTGGCCATGGAAATCAGCTCATGGGAGATCCTTTCGACAGTGGTACTGCTGATAAGTTCAATGGGAATTCGTTTGATGGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTAGATGATGATGATATAATGCCATATCTGGGAACATAACCTAGGCAACTCTTTTGCAATTGTAAGAACTGCGACATCCAGAAATGTAAATGGTGGCAGAAGTTCCTGTATCGTTCATTAGCTAATCGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCTGCTGCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCTATCGCTTTTAATTAGCCTGTTCTGGATTATTTAGCCTGGCTGTAAAAAAGCTCATAGAAACTCGCTTAGCTGGAGAATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAATTTTGCTCAGTTACTCATAGATAAATCTTGATGTATATGAGACATGTTCATTGCAGCTAGCTCAGACATAATAATACCTGAATTCTTGCATGCTGGAA]

[+] EMBL AK072462             [ATCTGATTACTCCGCGGCGGCGGCGGCGGCGGGAGCGGCATCTCCTACGAGATTCCTCTCTTGATGGTATCGTTGAACAAGCCAACTAAGCACAAGGAGTTGTCTCGGGTGATGAGATAATTTGGTTAAGGAAGGTAGGAAACAGTAAATTCAATGGGCAATCCTTCTATTCTCACGGAGGATTTAGGCGATACGTCTGACTTTGAGGTTGATGGCGTCGAGAACCTCACGGAGAATGATGTCAGTGATGAGGAGATTGATGCCGAGGAGCTGGCCCGACGGATGTGGAAAGACAAGATCAAGCTGAAGAGGATCAAGGAGAGGCAGCAGAAGCTTGCTCTGCAGCAGGCAGCACTAGAGGAGTCCAAAACAAAGAAGATGTCTGAGCAGGCTCTCCGCAAGAAGACGGCGAGAGTCCAGGATGGGATCTTGAGGTACATGCTCAAGCTGATGGAGGTGTGCAATGCTCGTGGGTTTGTTTATGGGATCATTCCTCATAAAGGGAAGCCTGTCAGTGGTGCATCGGATAACATTAGAGCTTGGTGGAAGGAGAAGGTTCGGTTCGATGTGAATGGGCCGGTTGCCATTGCAAAGTATGAGGTTAAGAACTCAATGCTGGTTGATGCTAAGCGCAGAGGGGTCTTGAACCAGCATAGCTTGATGGATCTCCAGGATGCTACCCTGGGATCATTGCTCTCATCGTTGATGCAGCATTGCAGCCCGCAGCAGCGCAAGTACCCACTGGATAAGGGTGTCCCTCCCCCATGGTGGCCATCAGGAAATGAGGATTGGTGGATTTCTTTAGGCCTTCCAATGGGAATATCACCACCATACAGAAAACCGCATGATCTTAAGAAGGTTTGGAAGGTTGGCGTGCTGACGGGTGTGATCAAACACATGGCCCCAAACTTTGATAAGATCAGGAATTGTGTAAGGAAATCGAAGTGCTTGCAAGACAAAATGACTGCTAAAGAGAGCTTGATTTGGCTGGGAGTTCTTCGAAGAGAGGAAATATATTTTCGCAGTTCTGACAATGTTGGATCACAGATTACACACCGTAGTTCTCGTGAGGGAAAAAGTGATGATATATATAGCAGCAGTGATGAGTATGATGTCGACCATTTGGAGGAACCTCCTCGCTCTTCATCATCCAAAGATAATGTGGGGCGTCGTCAGCCAACTGCGCAGATCAGAGAGGAGCATACCTCTAGTCGACACAACAGAGGACGCCATGATCAGCAACCCAATCAAGTACTTCCTAGCAATGAAGGGACCAATGAATCAAGGAAGAGAAAGAGACCTAGTGGTCATTTACTTACTGCTGAATCTGAGGTTGAGGTAACACAAAAAGATGACAATCAACTAGCCATTGTGAGCAATGCATTGCCCAATATGAGCAGAATAAACCAAACGGAGATGATGGGCATGGCTAACCAGATGACAAGCCTCAGCCATGTCAATACAACTGAAACTCTACAGCATCAATATGTTCAAGGGAACTTCGTATCTTCTCCTGCTGCTGTGGTTAATAACTATAACAGCAACCAGATTACAAATGTTAATCCTTCAAGGATTTATATGGGATATCAGCCTTTAGCATGCCAAAATAATGGTCACACAAATCCATGGTCTGAAGACACTTTTCAGGTTGATGTTGGTCCACCACCTATTGGTTTTACTACTAATTCTTCGTCAGGTGGTAATCATTCTTTTCCCATGAAACAATCACTACCAAAATCTATAGATGATCATGTGCCTATTACGGAGACAGGGGTGTTGGCTGATAGCAGTTCATATGGTTATCATATCACAGCCACAGGTAGTAGGAATTCAACCTCTGTTGCTGGCCATGGAAATCAGCTCATGGGAGATCCTTTCGACAGTGGTACTGCTGATAAGTTCAATGGGAATTCGTTTGATGGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTAGATGATGATGATATAATGCCATATCTGGGAACATAACCTAGGCAACTCTTTTGCAATTGTAAGAACTGCGACATCCAGAAATGTAAATGGTGGCAGAAGTTCCTGTATCGTTCATTAGCTAATCGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCTGCTGCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCTATCGCTTTTAATTAGCCTGTTCTGGATTATTTAGCCTGGCTGTAAAAAAGCTCATAGAAACTCGCTTAGCTGGAGAATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAATTTTGCTCAGTTACTCATAGATAAATCTTGATGTATATGAGACATGTTCATTGCAGCTAGCTCAGACATAATAATACCT                   ]
[+] EMBL CA764022             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATAGCAGTTCATATGGTTATCATATCACAGCCACAGGTAGTAGGAATTCAACCTCTGTTGCTGGCCATGGAAATGAGCTCATGGGAGATCCTTTCGACAGTGGTACTGCTGATAAGTTCAATGGGAATTCGTTTGATGGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTAGATGATGATGATATAATGCCATATCTGGGAACATAACCTAGGCAACTCTTTTGCAATTGTAAGAACTGCGACATCCAGAAATGTAAATGGTGGCAGAAGTTCCTGTATCGTTCATTAGCTAATCGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCTGCTGCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCCATCGCTTTTAATTAGCCTGTTCTGGATTATTTAGCCTGGCTGTAAAAAAGCTCATAGAAACTCGCTTAGCTGGAGAATTTCCTGCAATGCTTGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAATTTTGCTCAGTTACTCATAGATAAATCTTGATGTATATGAGACATGTTCATTGCAGCTAGCTCAGATATAATAATACCTGAATTCTTGCATGCTGGAA]


>consensus_6668#0 ATCTGATTACTCCGCGGCGGCGGCGGCGGCGGGAGCGGCATCTCCTACGAGATTCCTCTC TTGATGGTATCGTTGAACAAGCCAACTAAGCACAAGGAGTTGTCTCGGGTGATGAGATAA TTTGGTTAAGGAAGGTAGGAAACAGTAAATTCAATGGGCAATCCTTCTATTCTCACGGAG GATTTAGGCGATACGTCTGACTTTGAGGTTGATGGCGTCGAGAACCTCACGGAGAATGAT GTCAGTGATGAGGAGATTGATGCCGAGGAGCTGGCCCGACGGATGTGGAAAGACAAGATC AAGCTGAAGAGGATCAAGGAGAGGCAGCAGAAGCTTGCTCTGCAGCAGGCAGCACTAGAG GAGTCCAAAACAAAGAAGATGTCTGAGCAGGCTCTCCGCAAGAAGACGGCGAGAGTCCAG GATGGGATCTTGAGGTACATGCTCAAGCTGATGGAGGTGTGCAATGCTCGTGGGTTTGTT TATGGGATCATTCCTCATAAAGGGAAGCCTGTCAGTGGTGCATCGGATAACATTAGAGCT TGGTGGAAGGAGAAGGTTCGGTTCGATGTGAATGGGCCGGTTGCCATTGCAAAGTATGAG GTTAAGAACTCAATGCTGGTTGATGCTAAGCGCAGAGGGGTCTTGAACCAGCATAGCTTG ATGGATCTCCAGGATGCTACCCTGGGATCATTGCTCTCATCGTTGATGCAGCATTGCAGC CCGCAGCAGCGCAAGTACCCACTGGATAAGGGTGTCCCTCCCCCATGGTGGCCATCAGGA AATGAGGATTGGTGGATTTCTTTAGGCCTTCCAATGGGAATATCACCACCATACAGAAAA CCGCATGATCTTAAGAAGGTTTGGAAGGTTGGCGTGCTGACGGGTGTGATCAAACACATG GCCCCAAACTTTGATAAGATCAGGAATTGTGTAAGGAAATCGAAGTGCTTGCAAGACAAA ATGACTGCTAAAGAGAGCTTGATTTGGCTGGGAGTTCTTCGAAGAGAGGAAATATATTTT CGCAGTTCTGACAATGTTGGATCACAGATTACACACCGTAGTTCTCGTGAGGGAAAAAGT GATGATATATATAGCAGCAGTGATGAGTATGATGTCGACCATTTGGAGGAACCTCCTCGC TCTTCATCATCCAAAGATAATGTGGGGCGTCGTCAGCCAACTGCGCAGATCAGAGAGGAG CATACCTCTAGTCGACACAACAGAGGACGCCATGATCAGCAACCCAATCAAGTACTTCCT AGCAATGAAGGGACCAATGAATCAAGGAAGAGAAAGAGACCTAGTGGTCATTTACTTACT GCTGAATCTGAGGTTGAGGTAACACAAAAAGATGACAATCAACTAGCCATTGTGAGCAAT GCATTGCCCAATATGAGCAGAATAAACCAAACGGAGATGATGGGCATGGCTAACCAGATG ACAAGCCTCAGCCATGTCAATACAACTGAAACTCTACAGCATCAATATGTTCAAGGGAAC TTCGTATCTTCTCCTGCTGCTGTGGTTAATAACTATAACAGCAACCAGATTACAAATGTT AATCCTTCAAGGATTTATATGGGATATCAGCCTTTAGCATGCCAAAATAATGGTCACACA AATCCATGGTCTGAAGACACTTTTCAGGTTGATGTTGGTCCACCACCTATTGGTTTTACT ACTAATTCTTCGTCAGGTGGTAATCATTCTTTTCCCATGAAACAATCACTACCAAAATCT ATAGATGATCATGTGCCTATTACGGAGACAGGGGTGTTGGCTGATAGCAGTTCATATGGT TATCATATCACAGCCACAGGTAGTAGGAATTCAACCTCTGTTGCTGGCCATGGAAATCAG CTCATGGGAGATCCTTTCGACAGTGGTACTGCTGATAAGTTCAATGGGAATTCGTTTGAT GGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTAGAT GATGATGATATAATGCCATATCTGGGAACATAACCTAGGCAACTCTTTTGCAATTGTAAG AACTGCGACATCCAGAAATGTAAATGGTGGCAGAAGTTCCTGTATCGTTCATTAGCTAAT CGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCTGCT GCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCTATCGCTTTTAATT AGCCTGTTCTGGATTATTTAGCCTGGCTGTAAAAAAGCTCATAGAAACTCGCTTAGCTGG AGAATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAATTT TGCTCAGTTACTCATAGATAAATCTTGATGTATATGAGACATGTTCATTGCAGCTAGCTC AGACATAATAATACCTGAATTCTTGCATGCTGGAA



consensusID : consensus_6668#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 591
fasta sequence
                              [ACGAGCATCATTAGAGTTGAAAATGGGCTCCAGGCACTGCNGGCATATNCTCNCGACAGNGGTACTGCTGATAAGTTCAATGGGAATTCGTTTGATGGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTAGATGATGATGATATAATGCCATATCTGGGAACATAACCTAGGCAACTCTTTTGCAATTGTAAGAACTGCGACATCCAGAAATGTAAATGGTGGCAGAAGTTCCTGTATCGTTCATTAGCTAATCGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCTGCTGCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCCATCGCTTTTAATTAGCCTGTTCTGGATTATTTAGCCTGGCTGTAAAAAAGCTCATAGAAACTCGCTTAGCTGGAGAATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAATTTTGCTCAGTTACTCATAGATNAATCTTGATGTATATGANACATGTTCATTGCAGCTAGCTCANACATAATAATACC]

[+] EMBL AA751632             [ACGAGCATCATTAGAGTTGAAAATGGGCTCCAGGCACTGCNGGCATATNCTCNCGACAGNGGTACTGCTGATAAGTTCAATGGGAATTCGTTTGATGGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTAGATGATGATGATATAATGCCATATCTGGGAACATAACCTAGGCAACTCTTTTGCAATTGTAAGAACTGCGACATCCAGAAATGTAAATGGTGGCAGAAGTTCCTGTATCGTTCATTAGCTAATCGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCTGCTGCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCCATCGCTTTTAATTAGCCTGTTCTGGATTATTTAGCCTGGCTGTAAAAAAGCTCATAGAAACTCGCTTAGCTGGAGAATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAATTTTGCTCAGTTACTCATAGATNAATCTTGATGTATATGANACATGTTCATTGCAGCTAGCTCANACATAATAATACC]


>consensus_6668#1 ACGAGCATCATTAGAGTTGAAAATGGGCTCCAGGCACTGCNGGCATATNCTCNCGACAGN GGTACTGCTGATAAGTTCAATGGGAATTCGTTTGATGGATTGCCTTTTGACTTCATTGGT AGTAGTCCAATCCCTGACATCGGTGTATTGCTAGATGATGATGATATAATGCCATATCTG GGAACATAACCTAGGCAACTCTTTTGCAATTGTAAGAACTGCGACATCCAGAAATGTAAA TGGTGGCAGAAGTTCCTGTATCGTTCATTAGCTAATCGCTGAGAACTTGAGAAGGGCGCG CTCATCATGGCATGCTGGTGTTCCGCTTAACCTGCTGCAACCAGTGAAGGATGCGTCGTG CCAATGATCTGTAATTTGTACCCATCGCTTTTAATTAGCCTGTTCTGGATTATTTAGCCT GGCTGTAAAAAAGCTCATAGAAACTCGCTTAGCTGGAGAATTTCCTGCAATGCTGGATGG TTGTATACATTTTTACCTGTGCTACCATGTTAATTTTGCTCAGTTACTCATAGATNAATC TTGATGTATATGANACATGTTCATTGCAGCTAGCTCANACATAATAATACC



consensusID : consensus_6668#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 584
fasta sequence
                              [ATCATGTGCCTATTACGGAGACAGGGGTGTTGGCTGATAGCAGTTCATATGGTTATCATATCACAGCCACAGGTAGTAGGAATTCAACCTCTGTTGCTGGCCATGGAAATCAGCTCATGGGAGATCCTTTCGACAGTGGTACTGCTGATAAGTTCAATGGGAATTCGTTTGATGGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTAGATGATGATGATATAATGCCATATCTGGGAACATAACCTAGAAGTTCCTGTATCGTTCATTAGCTAATCGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCTGCTGCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCTATCGCTTTTAATTAGCCTGTTCTGGATTATTTAGAATAGAAGTAAAAAAGCTCATAGAAACTCGCTTAGCTGGAGAATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAATTTTGCTCAGTTACTCATAGATAAATCTTGATGTAAAAAAAAAAAAAAA]

[-] EMBL CF307518             [ATCATGTGCCTATTACGGAGACAGGGGTGTTGGCTGATAGCAGTTCATATGGTTATCATATCACAGCCACAGGTAGTAGGAATTCAACCTCTGTTGCTGGCCATGGAAATCAGCTCATGGGAGATCCTTTCGACAGTGGTACTGCTGATAAGTTCAATGGGAATTCGTTTGATGGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTAGATGATGATGATATAATGCCATATCTGGGAACATAACCTAGAAGTTCCTGTATCGTTCATTAGCTAATCGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCTGCTGCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCTATCGCTTTTAATTAGCCTGTTCTGGATTATTTAGAATAGAAGTAAAAAAGCTCATAGAAACTCGCTTAGCTGGAGAATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAATTTTGCTCAGTTACTCATAGATAAATCTTGATGTAAAAAAAAAAAAAAA]


>consensus_6668#2 ATCATGTGCCTATTACGGAGACAGGGGTGTTGGCTGATAGCAGTTCATATGGTTATCATA TCACAGCCACAGGTAGTAGGAATTCAACCTCTGTTGCTGGCCATGGAAATCAGCTCATGG GAGATCCTTTCGACAGTGGTACTGCTGATAAGTTCAATGGGAATTCGTTTGATGGATTGC CTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTAGATGATGATG ATATAATGCCATATCTGGGAACATAACCTAGAAGTTCCTGTATCGTTCATTAGCTAATCG CTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCTGCTGC AACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCTATCGCTTTTAATTAG CCTGTTCTGGATTATTTAGAATAGAAGTAAAAAAGCTCATAGAAACTCGCTTAGCTGGAG AATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAATTTTG CTCAGTTACTCATAGATAAATCTTGATGTAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6668#0      ATCTGATTACTCCGCGGCGGCGGCGGCGGCGGGAGCGGCATCTCCTACGAGATTCCTCTC 60
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      TTGATGGTATCGTTGAACAAGCCAACTAAGCACAAGGAGTTGTCTCGGGTGATGAGATAA 120
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      TTTGGTTAAGGAAGGTAGGAAACAGTAAATTCAATGGGCAATCCTTCTATTCTCACGGAG 180
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      GATTTAGGCGATACGTCTGACTTTGAGGTTGATGGCGTCGAGAACCTCACGGAGAATGAT 240
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      GTCAGTGATGAGGAGATTGATGCCGAGGAGCTGGCCCGACGGATGTGGAAAGACAAGATC 300
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      AAGCTGAAGAGGATCAAGGAGAGGCAGCAGAAGCTTGCTCTGCAGCAGGCAGCACTAGAG 360
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      GAGTCCAAAACAAAGAAGATGTCTGAGCAGGCTCTCCGCAAGAAGACGGCGAGAGTCCAG 420
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      GATGGGATCTTGAGGTACATGCTCAAGCTGATGGAGGTGTGCAATGCTCGTGGGTTTGTT 480
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      TATGGGATCATTCCTCATAAAGGGAAGCCTGTCAGTGGTGCATCGGATAACATTAGAGCT 540
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      TGGTGGAAGGAGAAGGTTCGGTTCGATGTGAATGGGCCGGTTGCCATTGCAAAGTATGAG 600
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      GTTAAGAACTCAATGCTGGTTGATGCTAAGCGCAGAGGGGTCTTGAACCAGCATAGCTTG 660
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      ATGGATCTCCAGGATGCTACCCTGGGATCATTGCTCTCATCGTTGATGCAGCATTGCAGC 720
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      CCGCAGCAGCGCAAGTACCCACTGGATAAGGGTGTCCCTCCCCCATGGTGGCCATCAGGA 780
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      AATGAGGATTGGTGGATTTCTTTAGGCCTTCCAATGGGAATATCACCACCATACAGAAAA 840
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      CCGCATGATCTTAAGAAGGTTTGGAAGGTTGGCGTGCTGACGGGTGTGATCAAACACATG 900
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      GCCCCAAACTTTGATAAGATCAGGAATTGTGTAAGGAAATCGAAGTGCTTGCAAGACAAA 960
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      ATGACTGCTAAAGAGAGCTTGATTTGGCTGGGAGTTCTTCGAAGAGAGGAAATATATTTT 1020
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      CGCAGTTCTGACAATGTTGGATCACAGATTACACACCGTAGTTCTCGTGAGGGAAAAAGT 1080
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      GATGATATATATAGCAGCAGTGATGAGTATGATGTCGACCATTTGGAGGAACCTCCTCGC 1140
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      TCTTCATCATCCAAAGATAATGTGGGGCGTCGTCAGCCAACTGCGCAGATCAGAGAGGAG 1200
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      CATACCTCTAGTCGACACAACAGAGGACGCCATGATCAGCAACCCAATCAAGTACTTCCT 1260
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      AGCAATGAAGGGACCAATGAATCAAGGAAGAGAAAGAGACCTAGTGGTCATTTACTTACT 1320
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      GCTGAATCTGAGGTTGAGGTAACACAAAAAGATGACAATCAACTAGCCATTGTGAGCAAT 1380
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      GCATTGCCCAATATGAGCAGAATAAACCAAACGGAGATGATGGGCATGGCTAACCAGATG 1440
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      ACAAGCCTCAGCCATGTCAATACAACTGAAACTCTACAGCATCAATATGTTCAAGGGAAC 1500
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      TTCGTATCTTCTCCTGCTGCTGTGGTTAATAACTATAACAGCAACCAGATTACAAATGTT 1560
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      AATCCTTCAAGGATTTATATGGGATATCAGCCTTTAGCATGCCAAAATAATGGTCACACA 1620
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      AATCCATGGTCTGAAGACACTTTTCAGGTTGATGTTGGTCCACCACCTATTGGTTTTACT 1680
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      ACTAATTCTTCGTCAGGTGGTAATCATTCTTTTCCCATGAAACAATCACTACCAAAATCT 1740
consensus_6668#2      ------------------------------------------------------------
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      ATAGATGATCATGTGCCTATTACGGAGACAGGGGTGTTGGCTGATAGCAGTTCATATGGT 1800
consensus_6668#2      -------ATCATGTGCCTATTACGGAGACAGGGGTGTTGGCTGATAGCAGTTCATATGGT 53
consensus_6668#1      ------------------------------------------------------------
                                                                                  

consensus_6668#0      TATCATATCACAGCCACAGGTAGTAGGAATTCAACCTCTGTTGCTGGCCATGGAAATCAG 1860
consensus_6668#2      TATCATATCACAGCCACAGGTAGTAGGAATTCAACCTCTGTTGCTGGCCATGGAAATCAG 113
consensus_6668#1      ------------------------ACGAGC---ATCATTAGAGTTGAAAATGGGCTCCAG 33
                                              * **     * *  *   * **   ****    ***

consensus_6668#0      ---CTCATGGGAGATCCTTTCGACAGTGGTACTGCTGATAAGTTCAATGGGAATTCGTTT 1917
consensus_6668#2      ---CTCATGGGAGATCCTTTCGACAGTGGTACTGCTGATAAGTTCAATGGGAATTCGTTT 170
consensus_6668#1      GCACTGCNGGCATATNCTCNCGACAGNGGTACTGCTGATAAGTTCAATGGGAATTCGTTT 93
                         **   ** * ** **  ****** *********************************

consensus_6668#0      GATGGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTA 1977
consensus_6668#2      GATGGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTA 230
consensus_6668#1      GATGGATTGCCTTTTGACTTCATTGGTAGTAGTCCAATCCCTGACATCGGTGTATTGCTA 153
                      ************************************************************

consensus_6668#0      GATGATGATGATATAATGCCATATCTGGGAACATAACCTAGGCAACTCTTTTGCAATTGT 2037
consensus_6668#2      GATGATGATGATATAATGCCATATCTGGGAACATAACCTAG------------------- 271
consensus_6668#1      GATGATGATGATATAATGCCATATCTGGGAACATAACCTAGGCAACTCTTTTGCAATTGT 213
                      *****************************************                   

consensus_6668#0      AAGAACTGCGACATCCAGAAATGTAAATGGTGGCAGAAGTTCCTGTATCGTTCATTAGCT 2097
consensus_6668#2      ------------------------------------AAGTTCCTGTATCGTTCATTAGCT 295
consensus_6668#1      AAGAACTGCGACATCCAGAAATGTAAATGGTGGCAGAAGTTCCTGTATCGTTCATTAGCT 273
                                                          ************************

consensus_6668#0      AATCGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCT 2157
consensus_6668#2      AATCGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCT 355
consensus_6668#1      AATCGCTGAGAACTTGAGAAGGGCGCGCTCATCATGGCATGCTGGTGTTCCGCTTAACCT 333
                      ************************************************************

consensus_6668#0      GCTGCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCTATCGCTTTTA 2217
consensus_6668#2      GCTGCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCTATCGCTTTTA 415
consensus_6668#1      GCTGCAACCAGTGAAGGATGCGTCGTGCCAATGATCTGTAATTTGTACCCATCGCTTTTA 393
                      ************************************************* **********

consensus_6668#0      ATTAGCCTGTTCTGGATTATTTAGCCTGGCTGTAAAAAAGCTCATAGAAACTCGCTTAGC 2277
consensus_6668#2      ATTAGCCTGTTCTGGATTATTTAGAATAGAAGTAAAAAAGCTCATAGAAACTCGCTTAGC 475
consensus_6668#1      ATTAGCCTGTTCTGGATTATTTAGCCTGGCTGTAAAAAAGCTCATAGAAACTCGCTTAGC 453
                      ************************  * *  *****************************

consensus_6668#0      TGGAGAATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAA 2337
consensus_6668#2      TGGAGAATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAA 535
consensus_6668#1      TGGAGAATTTCCTGCAATGCTGGATGGTTGTATACATTTTTACCTGTGCTACCATGTTAA 513
                      ************************************************************

consensus_6668#0      TTTTGCTCAGTTACTCATAGATAAATCTTGATGTATATGAGACATGTTCATTGCAGCTAG 2397
consensus_6668#2      TTTTGCTCAGTTACTCATAGATAAATCTTGATGTAAAAAAAAAAAAAAA----------- 584
consensus_6668#1      TTTTGCTCAGTTACTCATAGATNAATCTTGATGTATATGANACATGTTCATTGCAGCTAG 573
                      ********************** ************ *  * * *                

consensus_6668#0      CTCAGACATAATAATACCTGAATTCTTGCATGCTGGAA 2435
consensus_6668#2      --------------------------------------
consensus_6668#1      CTCANACATAATAATACC-------------------- 591
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)