These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6680#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1823 fasta sequence [CGATCC---CCACCACCACCAGCAGCGGCAGCCTCGGCCGGCGCGGCGCGGCGAGGTGGGGAAGCGAGGAAGAGTGGGAGGGCTCTCGCCATGGCGTCGAAGCAGATGGAGGAGATCCAGCGGAAGCTGGCGGTGCTGGCCTACCCGCGGGCCAACGCCCCCGCCCAGTCCCTCCTCTTCGCCGGCGTCGAGCGCTACCGCCTCCTCGAGTGGCTCTTCTTCCGGCTCCTAGGCGACAGATCGCCGTTCACGCAGCAGAACTGGCAGGGGGATAGCCTCGACCGCGACGAGGAGAACAGCAGGATCCAACACCTGGCCGAGATTGCGAATTTCCTTGGTATAACGCCTTCGGTTGACACGGAGGCAATTCAGGGTAGAGGTAGCTACGATGAGCGTGTAGAGCTTCTCTGTCTCATTGTTGATCTAGTTGAAGCTAGCTGCTATGCTGACAATCCAGAGTGGAGTGTTGATGAGCAGCTGGCAAAAGATGTGCTGCTCGTAGATTCAATTGCAGAGAAACAAGCCCAAATATTTTCTGAAGAGTGCAAACTATTTCCTGCAGATGTTCAGATACAATCAATTTACCCCTTGCCTGATATAACAGAACTGGAGTTGAAGCTCTCCGAGTATACTAAAAAGATGTCAAATTTGCAACTGATGGTTCAGGAGTTAGCATCTAAGTATGACTATAATCCGAATGAAGACTATGCCGAGACAGAGTTAAAACTGAGGGAACATTTGCAATCGTTCCTAGAAACAGTAAAATCCTTCAATATGATCTACACTAAGGAAATTCATCCTTGGACACATATGATGGAGGTCCCTCAATTGCATGGTTTTGGTCCAGCTGCTAATCGCTTGTTGGAGGCATATAACACACTTTTGAAGTTCCTTAGTAATTTGAGGAGCCTACGGGATTCGTATGCAGCAATGGCTGCAGGATCGCTTTCAGCATCTAATGAGCCTTCATCTGTCACCAAAATTATCTCCGACTGTGAATCTGCACTTACATTCTTAAATAACAGCCTTTCCATCCTTTCAACTTCTGTGGCACGGGAGCAGGGTGAGACTCTGAATTCACAGTAGCCTGATATCAGGATACTTGAATAACCTTGTAGCAAGTCGATCATTTGCTTTTTGTGGCTTGTAGTATTGCCGTTGTGCCAATTGTCGTTGTGTTCTTGTGTCTGTAGTTCGTAACTGCATAGATGAAAACTTTAACATTAGCTTATATTGAAATATCATGCCGAGAGCTCTCTTTCAAGGCTGTGTACGGCTGCACGTTGCAGCGGCTGCAACGCTGTACAAAATAATGTGCGAGGCGGCCGCAGCCGCAGTAGTGCAGCCGTAACAGGCCCCAAGTTTGTGCAGTACTTGTATGTTTTTTCTTTTTTCTTTTTTTCCCCCTTTGATTCTTTAGACAGTAGTAAATTTCGCTAAGCAAATGTACCTTTTTTCCCCCTGAAAACGGTTCTAAATTTGACACATCAATGATGAATTGAATCAAGTCACAGCCTGCACGTTGAGCCTCTTCCCGGCGCTTCGTTTTCCGGATGCTGCTGCCTGTACAGATCTTCAAAACTTGACACCATGGTTCTGAATCTTCTGATAAACGAAGGGAAAAGCCTGCATTTCTACAGAGCCACAGCGATGCACGCACTTGTGTCTGTGTACGTATAATCAGGCTTGACATATTTGCTTTCAAGAGTTCAAGACCAAGCATTTCCCAGTCCGATCGCAGCCACACGACGTTTCAGTTTTGGACGTCACAACGCCGCCGGCGTACGATTGTACGAGCTGAGGGCGATGGACTACCCACCACCTAC] [+] EMBL AK070435 [CGATCCCCACCACCACCACCAGCAGCGGCAGCCTCGGCCGGCGCGGCGCGGCGAGGTGGGGAAGCGAGGAAGAGTGGGAGGGCTCTCGCCATGGCGTCGAAGCAGATGGAGGAGATCCAGCGGAAGCTGGCGGTGCTGGCCTACCCGCGGGCCAACGCCCCCGCCCAGTCCCTCCTCTTCGCCGGCGTCGAGCGCTACCGCCTCCTCGAGTGGCTCTTCTTCCGGCTCCTAGGCGACAGATCGCCGTTCACGCAGCAGAACTGGCAGGGGGATAGCCTCGACCGCGACGAGGAGAACAGCAGGATCCAACACCTGGCCGAGATTGCGAATTTCCTTGGTATAACGCCTTCGGTTGACACGGAGGCAATTCAGGGTAGAGGTAGCTACGATGAGCGTGTAGAGCTTCTCTGTCTCATTGTTGATCTAGTTGAAGCTAGCTGCTATGCTGACAATCCAGAGTGGAGTGTTGATGAGCAGCTGGCAAAAGATGTGCTGCTCGTAGATTCAATTGCAGAGAAACAAGCCCAAATATTTTCTGAAGAGTGCAAACTATTTCCTGCAGATGTTCAGATACAATCAATTTACCCCTTGCCTGATATAACAGAACTGGAGTTGAAGCTCTCCGAGTATACTAAAAAGATGTCAAATTTGCAACTGATGGTTCAGGAGTTAGCATCTAAGTATGACTATAATCCGAATGAAGACTATGCCGAGACAGAGTTAAAACTGAGGGAACATTTGCAATCGTTCCTAGAAACAGTAAAATCCTTCAATATGATCTACACTAAGGAAATTCATCCTTGGACACATATGATGGAGGTCCCTCAATTGCATGGTTTTGGTCCAGCTGCTAATCGCTTGTTGGAGGCATATAACACACTTTTGAAGTTCCTTAGTAATTTGAGGAGCCTACGGGATTCGTATGCAGCAATGGCTGCAGGATCGCTTTCAGCATCTAATGAGCCTTCATCTGTCACCAAAATTATCTCCGACTGTGAATCTGCACTTACATTCTTAAATAACAGCCTTTCCATCCTTTCAACTTCTGTGGCACGGGAGCAGGGTGAGACTCTGAATTCACAGTAGCCTGATATCAGGATACTTGAATAACCTTGTAGCAAGTCGATCATTTGCTTTTTGTGGCTTGTAGTATTGCCGTTGTGCCAATTGTCGTTGTGTTCTTGTGTCTGTAGTTCGTAACTGCATAGATGAAAACTTTAACATTA ] [+] EMBL AK106718 [ GATCC CCACCACCACCAGCAGCGGCAGCCTCGGCCGGCGCGGCGCGGCGAGGTGGGGAAGCGAGGAAGAGTGGGAGGGCTCTCGCCATGGCGTCGAAGCAGATGGAGGAGATCCAGCGGAAGCTGGCGGTGCTGGCCTACCCGCGGGCCAACGCCCCCGCCCAGTCCCTCCTCTTCGCCGGCGTCGAGCGCTACCGCCTCCTCGAGTGGCTCTTCTTCCGGCTCCTAGGCGACAGATCGCCGTTCACGCAGCAGAACTGGCAGGGGGATAGCCTCGACCGCGACGAGGAGAACAGCAGGATCCAACACCTGGCCGAGATTGCGAATTTCCTTGGTATAACGCCTTCGGTTGACACGGAGGCAATTCAGGGTAGAGGTAGCTACGATGAGCGTGTAGAGCTTCTCTGTCTCATTGTTGATCTAGTTGAAGCTAGCTGCTATGCTGACAATCCAGAGTGGAGTGTTGATGAGCAGCTGGCAAAAGATGTGCTGCTCGTAGATTCAATTGCAGAGAAACAAGCCCAAATATTTTCTGAAGAGTGCAAACTATTTCCTGCAGATGTTCAGATACAATCAATTTACCCCTTGCCTGATATAACAGAACTGGAGTTGAAGCTCTCCGAGTATACTAAAAAGATGTCAAATTTGCAACTGATGGTTCAGGAGTTAGCATCTAAGTATGACTATAATCCGAATGAAGACTATGCCGAGACAGAGTTAAAACTGAGGGAACATTTGCAATCGTTCCTAGAAACAGTAAAATCCTTCAATATGATCTACACTAAGGAAATTCATCCTTGGACACATATGATGGAGGTCCCTCAATTGCATGGTTTTGGTCCAGCTGCTAATCGCTTGTTGGAGGCATATAACACACTTTTGAAGTTCCTTAGTAATTTGAGGAGCCTACGGGATTCGTATGCAGCAATGGCTGCAGGATCGCTTTCAGCATCTAATGAGCCTTCATCTGTCACCAAAATTATCTCCGACTGTGAATCTGCACTTACATTCTTAAATAACAGCCTTTCCATCCTTTCAACTTCTGTGGCACGGGAGCAGGGTGAGACTCTGAATTCACAGTAGCCTGATATCAGGATACTTGAATAACCTTGTAGCAAGTCGATCATTTGCTTTTTGTGGCTTGTAGTATTGCCGTTGTGCCAATTGTCGTTGTGTTCTTGTGTCTGTAGTTCGTAACTGCATAGATGAAAACTTTAACATTAGCTTATATTGAAATATCATGCCGAGAGCTCTCTTTCAAGGCTGTGTACGGCTGCACGTTGCAGCGGCTGCAACGCTGTACAAAATAATGTGCGAGGCGGCCGCAGCCGCAGTAGTGCAGCCGTAACAGGCCCCAAGTTTGTGCAGTACTTGTATGTTTTTTCTTTTTTCTTTTTTTCCCCCTTTGATTCTTTAGACAGTAGTAAATTTCGCTAAGCAAATGTACCTTTTTTCCCCCTGAAAACGGTTCTAAATTTGACACATCAATGATGAATTGAATCAAGTCACAGCCTGCACGTTGAGCCTCTTCCCGGCGCTTCGTTTTCCGGATGCTGCTGCCTGTACAGATCTTCAAAACTTGACACCATGGTTCTGAATCTTCTGATAAACGAAGGGAAAAGCCTGCATTTCTACAGAGCCACAGCGATGCACGCACTTGTGTCTGTGTACGTATAATCAGGCTTGACATATTTGCTTTCAAGAGTTCAAGACCAAGCATTTCCCAGTCCGATCGCAGCCACACGACGTTTCAGTTTTGGACGTCACAACGCCGCCGGCGTACGATTGTACGAGCTGAGGGCGATGGACTACCCACCACCTAC] [+] EMBL CB683665 [ a CCACCTCCACCAGCAGCGGCAGCCTCGGCCGGCGCGGCGCGGCGAGGTGGGGAAGCGAGGAAGAGTGGGAGGGCTCTCGCCATGGCGTCTAAGCAGATGGAGGAGATCCAGCGGAAGCTGGCGGTGCTGGCCTACCCGCGGGCCAACGCCCCCGCCCAGTCCCTCCTCTTCGCCGGCGTCGAGCGCTACCGCCTCCTCGAGTGGCTCTTCTTCCGGCTCCTAGGCGACAGATCGCCGTTCACGCAGCAGAACTGGCAGGGGGATAGCCTCGACCGCGACGAGGAGAACAGCAGGATCCAACACCTGGCCGAGATTGCGAATTTCCTTGGTATAACGCCTTCGGTTGACACGGAGGCAATTCAGGGTAGAGGTAGCTACGATGAGCGTGTAGAGCTTCTCTGTCTCATTGTTGATCTAGTTGAAGCTAGCTGCTATGCTGACAATCCAGAGTGGAGTGTTGATGAGCAGCTGGCAAAAGATGTGCTGCTCGTAGATTCAATTGCAGAGAAACAAGCCCAAATATTTTCTGAAGAGTGCAAACTATTTCCTGCAGATGTTCAGATACAATCAATTTACCCCTTGCCTGATATAACAGAACTGGAGTTGAAGCTCTCCGAGTATACTAAAAAGATGTCAAATTTGCAACTGATGGTTCAAGAGTTAGCATCTAAGTATGACTATAATCCGAATGAAGACTATGCCGAGACAGAGTTAAAACTGAGGGAACATTTGCAATCGTTCCTAGAAACAGTAAAATCCTTCA ] [-] EMBL CB683204 [ AGTGTTGATGAGCAGCTGGCAAAAGATGTGCTGCTCGTAGATTCAATTGCAGAGAAACAAGCCCAAATATTTTCTGAAGAGTGCAAACTATTTCCTGCAGATGTTCAGATACAATCAATTTACCCCTTGCCTGATATAACAGAACTGGAGTTGAAGCTCTCCGAGTATACTAAAAAGATGTCAAATTTGCAACTGATGGTTCAGGAGTTAGCATCTAAGTATGACTATAATCCGAATGAAGACTATGCCGAGACAGAGTTAAAACTGAGGGAACATTTGCAATCGTTCCTAGAAACAGTAAAATCCTTCAATATGATCTACACTAAGGAAATTCATCCTTGGACACATATGATGGAGGTCCCTCAATTGCATGGTTTTGGTCCAGCTGCTAATCGCTTGTTGGAGGCATATAACACACTTTTGAAGTTCCTTAGTAATTTGAGGAGCCTACGGGATTCGTATGCAGCAATGGCTGCAGGATCGCTTTCAGCATTTAATGAGCCTTCATCTGTCACCAAAATTATCTCCGACTGTGAATCTGCACTTACATTCTTAAATAACAGCCTTTCCATCCTTTCAACTTCTGTGGCACGGGAGCAGGGTGAGACTCTGAATTCACAGTAGCCTGATATCAGGATACTTGAATAACCTTGTAGCAAGTCGATCATTTGCTTTTTGTGGCTTGTAGTATTGCCGTTGTGCCAATTGTCGTTGTGTTCTTGTGTCTGTAGTTCGTAACTGCATAGATGAAAACTTTAACATTAGCTTATA TGAAAaaaaaaaga ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||