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Oryza sativa
cluster # 6682 cluster # 6682       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6682#0 length = 2393 sequences # 1  
consensus_6682#1 length = 1088 sequences # 3  

consensusID : consensus_6682#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2393
fasta sequence
                              [TCATTCCGAAGCCTTCGCCGCGTCTCGCCGGCGTACGCCGCAGGCGCCCCACCTCCTCCGGCGAGCCAGCTCGGAGCTAGACGCCTGCCCTCCCCACTCTCGCCGGCGGTGGGCGCGCGGGTGGAGCCCCTGCGTTGGCCGGACGGCGGGAGGAGATGACGGTGGCGGCGGGGTTAGGGTACGCGCTGGTCGCGCTGGGCCCCGCCTTCTCCCTCTTCGCCGGCGTCGTCGCCAGGAAGCCCTTCCTCGTCCTCACCCTTCTCACCAGCACTTTATTCTGGCTTATAAGTTTGATAATTCTCTCGGGAATATGGAGGGTATTTCTCCCTATAAGATCAGGAGCTTGGTGGCCGTATGCAATTCTTATCCTTACATCTGTTGCATTTCAAGAAGGCATTCGTCTTGTCTTTTGGAGGCTTTACAAGTAGGAAAATGGAAGAGATGCTGGATTCCTTTGCTGATAGAATATCTAAACCGCGCCTCTGTTTGACAGACAAGATGCTAATATCGTTGGGTAAGTTCTTGCATCACTAGATCAATATGTCCTTATTTCAAGATTGGCTTAATATTTCTCCATCCATCGTTTATATAGAAATTATTTCTCTATTTGGCTTGTGTTTGCCTTGAATTTTTATTTAAAATAGGTACCCACTGATATCTTTACCGTCATTTCATTTCTGTGAAGAAATACATATTTCATTTGGATATGGGATGAATGGTACCTCCATTTTTTTAGGTGGTCTACAGTTGCAACTTTTTTCCACAAAAGGAATTAAACTTTAACTTTGTATTATTCACAACTCACAAATATCCCGTAGGTTTCTATTTTCCTGATGTGTCATGGGCTTGGGCCCATTTCAAGGCAGGATGGCCTGTGTGGCTGTATCACGCGATCAATATACTTATTTACTATTCACATGGCAACAAACGACTTCACATCAGTTGCCTTAGAGATAAGATTAGATTTGCTAATCTGTTTCATAGTAGTGAAGTCATCCAATCTTTATAAGGATTGATTCTCTCTCTAATATTCAAGCAAGGAATAATCAAGGTCTTTAGTCTCCTTCCCTTTCTCTCTCTTCTCAACCAAGTCTTAGTGCCTTGGTGGCAGCAATGGCCAACCAATCAAGGGTGTCTCCTACCTTGCTCCTCATACGTTCATACTTATATCCAACCAATGTCTTCAACATGGAGTAATAATTGCAAGCTGACGTTCTAAATTTTTTAGTTAGACTATCAAATTGACATTGACTTTGATACAGATAAACAAAACCGTACTTGTCCTGATTTTCGTTAAAAACTACTGAGTGTAAGTTTTCAACACACTCTTCATGTTCTTGTTACATGGTGCACTTAACATTTTGACATACTCTTCATATTCTTGTTACACAGTGCACCTAACAGTGGACATAATTATAACTGCAAACGATAGGCTTTGCAGTACATATATAGGTCATCTTGGACCATCCAGTTTTAAGTTCTTATTTCATAGATTACATAAAAAAGTGCAATATGTGGTAGGCATTAAGGATTCTTAGTAAAACAATTGCAGTGCTGAGTTGGTAAGGTTGGAAGATTCACTGCAAAACTACCAAGCATTCTTTTAAATGGAGTATAGAACAGAGCCAAGGCACACATATGTGGTTCTTCATCTTGTGATTCGAAACTAGAAAATAATCAAAACACAAACTTGGTCTACGGTATTGGCTCAGCTGAATATTCTAAATGCAAACTGTGCATTCACTTATTGGTTAGTGTGAGCGTTTGTCCTTCATATCACTGTAAGTCAAAAATGATAACTGCTATTGTTTGAACTTTGAAATGTCTTTGCAGCTGGTGGTTTAGGCCATGGAGTGGCTCATGCCGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCATTCGGCAGAGCTACATTTTATGTTGAAAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCAGCCATTATTTCTCTTGGATTCTTGGTCATCCACACATTCTCAATGATTATTGCTTTTAATGGGTACGACGAGAGAAAGAGAAGTGATCAAGTATTTGTCCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAATCAATCTTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGTGACGTTGCAATACTGCTGGCAAATGGTATGGCGGAGATTATCTGAGCAGCAGCATCGGCAGTTTAGCAGCTAGTGCCTGGCAATGCTCCTTACATGTATCTTCTCATGTCCAATTTTAATAATCTTTTGTTTGGGGTACTAGGGCAAGAAGTTGTAAACGTAGCGAATTAGCGATTATACCACTAGTGGGATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTGAGAC]

[+] EMBL AK064930             [TCATTCCGAAGCCTTCGCCGCGTCTCGCCGGCGTACGCCGCAGGCGCCCCACCTCCTCCGGCGAGCCAGCTCGGAGCTAGACGCCTGCCCTCCCCACTCTCGCCGGCGGTGGGCGCGCGGGTGGAGCCCCTGCGTTGGCCGGACGGCGGGAGGAGATGACGGTGGCGGCGGGGTTAGGGTACGCGCTGGTCGCGCTGGGCCCCGCCTTCTCCCTCTTCGCCGGCGTCGTCGCCAGGAAGCCCTTCCTCGTCCTCACCCTTCTCACCAGCACTTTATTCTGGCTTATAAGTTTGATAATTCTCTCGGGAATATGGAGGGTATTTCTCCCTATAAGATCAGGAGCTTGGTGGCCGTATGCAATTCTTATCCTTACATCTGTTGCATTTCAAGAAGGCATTCGTCTTGTCTTTTGGAGGCTTTACAAGTAGGAAAATGGAAGAGATGCTGGATTCCTTTGCTGATAGAATATCTAAACCGCGCCTCTGTTTGACAGACAAGATGCTAATATCGTTGGGTAAGTTCTTGCATCACTAGATCAATATGTCCTTATTTCAAGATTGGCTTAATATTTCTCCATCCATCGTTTATATAGAAATTATTTCTCTATTTGGCTTGTGTTTGCCTTGAATTTTTATTTAAAATAGGTACCCACTGATATCTTTACCGTCATTTCATTTCTGTGAAGAAATACATATTTCATTTGGATATGGGATGAATGGTACCTCCATTTTTTTAGGTGGTCTACAGTTGCAACTTTTTTCCACAAAAGGAATTAAACTTTAACTTTGTATTATTCACAACTCACAAATATCCCGTAGGTTTCTATTTTCCTGATGTGTCATGGGCTTGGGCCCATTTCAAGGCAGGATGGCCTGTGTGGCTGTATCACGCGATCAATATACTTATTTACTATTCACATGGCAACAAACGACTTCACATCAGTTGCCTTAGAGATAAGATTAGATTTGCTAATCTGTTTCATAGTAGTGAAGTCATCCAATCTTTATAAGGATTGATTCTCTCTCTAATATTCAAGCAAGGAATAATCAAGGTCTTTAGTCTCCTTCCCTTTCTCTCTCTTCTCAACCAAGTCTTAGTGCCTTGGTGGCAGCAATGGCCAACCAATCAAGGGTGTCTCCTACCTTGCTCCTCATACGTTCATACTTATATCCAACCAATGTCTTCAACATGGAGTAATAATTGCAAGCTGACGTTCTAAATTTTTTAGTTAGACTATCAAATTGACATTGACTTTGATACAGATAAACAAAACCGTACTTGTCCTGATTTTCGTTAAAAACTACTGAGTGTAAGTTTTCAACACACTCTTCATGTTCTTGTTACATGGTGCACTTAACATTTTGACATACTCTTCATATTCTTGTTACACAGTGCACCTAACAGTGGACATAATTATAACTGCAAACGATAGGCTTTGCAGTACATATATAGGTCATCTTGGACCATCCAGTTTTAAGTTCTTATTTCATAGATTACATAAAAAAGTGCAATATGTGGTAGGCATTAAGGATTCTTAGTAAAACAATTGCAGTGCTGAGTTGGTAAGGTTGGAAGATTCACTGCAAAACTACCAAGCATTCTTTTAAATGGAGTATAGAACAGAGCCAAGGCACACATATGTGGTTCTTCATCTTGTGATTCGAAACTAGAAAATAATCAAAACACAAACTTGGTCTACGGTATTGGCTCAGCTGAATATTCTAAATGCAAACTGTGCATTCACTTATTGGTTAGTGTGAGCGTTTGTCCTTCATATCACTGTAAGTCAAAAATGATAACTGCTATTGTTTGAACTTTGAAATGTCTTTGCAGCTGGTGGTTTAGGCCATGGAGTGGCTCATGCCGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCATTCGGCAGAGCTACATTTTATGTTGAAAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCAGCCATTATTTCTCTTGGATTCTTGGTCATCCACACATTCTCAATGATTATTGCTTTTAATGGGTACGACGAGAGAAAGAGAAGTGATCAAGTATTTGTCCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAATCAATCTTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGTGACGTTGCAATACTGCTGGCAAATGGTATGGCGGAGATTATCTGAGCAGCAGCATCGGCAGTTTAGCAGCTAGTGCCTGGCAATGCTCCTTACATGTATCTTCTCATGTCCAATTTTAATAATCTTTTGTTTGGGGTACTAGGGCAAGAAGTTGTAAACGTAGCGAATTAGCGATTATACCACTAGTGGGATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTGAGAC]


>consensus_6682#0 TCATTCCGAAGCCTTCGCCGCGTCTCGCCGGCGTACGCCGCAGGCGCCCCACCTCCTCCG GCGAGCCAGCTCGGAGCTAGACGCCTGCCCTCCCCACTCTCGCCGGCGGTGGGCGCGCGG GTGGAGCCCCTGCGTTGGCCGGACGGCGGGAGGAGATGACGGTGGCGGCGGGGTTAGGGT ACGCGCTGGTCGCGCTGGGCCCCGCCTTCTCCCTCTTCGCCGGCGTCGTCGCCAGGAAGC CCTTCCTCGTCCTCACCCTTCTCACCAGCACTTTATTCTGGCTTATAAGTTTGATAATTC TCTCGGGAATATGGAGGGTATTTCTCCCTATAAGATCAGGAGCTTGGTGGCCGTATGCAA TTCTTATCCTTACATCTGTTGCATTTCAAGAAGGCATTCGTCTTGTCTTTTGGAGGCTTT ACAAGTAGGAAAATGGAAGAGATGCTGGATTCCTTTGCTGATAGAATATCTAAACCGCGC CTCTGTTTGACAGACAAGATGCTAATATCGTTGGGTAAGTTCTTGCATCACTAGATCAAT ATGTCCTTATTTCAAGATTGGCTTAATATTTCTCCATCCATCGTTTATATAGAAATTATT TCTCTATTTGGCTTGTGTTTGCCTTGAATTTTTATTTAAAATAGGTACCCACTGATATCT TTACCGTCATTTCATTTCTGTGAAGAAATACATATTTCATTTGGATATGGGATGAATGGT ACCTCCATTTTTTTAGGTGGTCTACAGTTGCAACTTTTTTCCACAAAAGGAATTAAACTT TAACTTTGTATTATTCACAACTCACAAATATCCCGTAGGTTTCTATTTTCCTGATGTGTC ATGGGCTTGGGCCCATTTCAAGGCAGGATGGCCTGTGTGGCTGTATCACGCGATCAATAT ACTTATTTACTATTCACATGGCAACAAACGACTTCACATCAGTTGCCTTAGAGATAAGAT TAGATTTGCTAATCTGTTTCATAGTAGTGAAGTCATCCAATCTTTATAAGGATTGATTCT CTCTCTAATATTCAAGCAAGGAATAATCAAGGTCTTTAGTCTCCTTCCCTTTCTCTCTCT TCTCAACCAAGTCTTAGTGCCTTGGTGGCAGCAATGGCCAACCAATCAAGGGTGTCTCCT ACCTTGCTCCTCATACGTTCATACTTATATCCAACCAATGTCTTCAACATGGAGTAATAA TTGCAAGCTGACGTTCTAAATTTTTTAGTTAGACTATCAAATTGACATTGACTTTGATAC AGATAAACAAAACCGTACTTGTCCTGATTTTCGTTAAAAACTACTGAGTGTAAGTTTTCA ACACACTCTTCATGTTCTTGTTACATGGTGCACTTAACATTTTGACATACTCTTCATATT CTTGTTACACAGTGCACCTAACAGTGGACATAATTATAACTGCAAACGATAGGCTTTGCA GTACATATATAGGTCATCTTGGACCATCCAGTTTTAAGTTCTTATTTCATAGATTACATA AAAAAGTGCAATATGTGGTAGGCATTAAGGATTCTTAGTAAAACAATTGCAGTGCTGAGT TGGTAAGGTTGGAAGATTCACTGCAAAACTACCAAGCATTCTTTTAAATGGAGTATAGAA CAGAGCCAAGGCACACATATGTGGTTCTTCATCTTGTGATTCGAAACTAGAAAATAATCA AAACACAAACTTGGTCTACGGTATTGGCTCAGCTGAATATTCTAAATGCAAACTGTGCAT TCACTTATTGGTTAGTGTGAGCGTTTGTCCTTCATATCACTGTAAGTCAAAAATGATAAC TGCTATTGTTTGAACTTTGAAATGTCTTTGCAGCTGGTGGTTTAGGCCATGGAGTGGCTC ATGCCGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCATTCGGCAGAGCTACATTTTATG TTGAAAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCAGCCATTATTTCTCTTGGATTCT TGGTCATCCACACATTCTCAATGATTATTGCTTTTAATGGGTACGACGAGAGAAAGAGAA GTGATCAAGTATTTGTCCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAATCAATC TTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGTGACGT TGCAATACTGCTGGCAAATGGTATGGCGGAGATTATCTGAGCAGCAGCATCGGCAGTTTA GCAGCTAGTGCCTGGCAATGCTCCTTACATGTATCTTCTCATGTCCAATTTTAATAATCT TTTGTTTGGGGTACTAGGGCAAGAAGTTGTAAACGTAGCGAATTAGCGATTATACCACTA GTGGGATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTGAGAC



consensusID : consensus_6682#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1088
fasta sequence
                              [CATTCCGAAGCCTTCGCCGCGTCTCGCCGGCGTACGCCGCAGGCGCCCCACCTCCTCCGGCGAGCCAGCTCGGAGCTAGACGCCTGCCCTCCCCACTCTCGCCGGCGGTGGGCGCGCGGGTGGAGCCCCTGCGTTGGCCGGACGGCGGGAGGAGATGACGGTGGCGGCGGGGTTAGGGTACGCGCTGGTCGCGCTGGGCCCCGCCTTCTCCCTCTTCGCCGGCGTCGTCGCCAGGAAGCCCTTCCTCGTCCTCACCCTTCTCACCAGCACTTTATTCTGGCTTATAAGTTTGATAATTCTCTCGGGAATATGGAGGGTATTTCTCCCTATAAGATCAGGAGCTTGGTGGCCGTATGCAATTCTTATCCTTACATCTGTTGCATTTCAAGAAGGCATTCGTCTTGTCTTTTGGAGGCTTTACAAGAAAATGGAAGAGATGCTGGATTCCTTTGCTGATAGAATATCTAAACCGCGCCTCTGTTTGACAGACAAGATGCTAATATCGTTGGCTGGTGGTTTAGGCCATGGAGTGGCTCATGCCGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCATTCGGCAGAGCTACATTTTATGTTGAAAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCAGCCATTATTTCTCTTGGATTCTTGGTCATCCACACATTCTCAATGATTATTGCTTTTAATGGGTACGACGAGAGAAAGAGAAGTGATCAAGTATTTGTCCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAATCAATCTTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGTGACGTTGCAATACTGCTGGCAAATGGTATGGCGGAGATTATCTGAGCAGCAGCATCGGCAGTTTAGCAGCTAGTGCCTGGCAATGCTCCTTACATGTATCTTCTCATGTCCAATTTTAATAATCTTTTGTTTGGGGTACTAGGGCAAGAAGTTGTAAACGTAGCGAATTAGCGATTATACCACTAGTGGGATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTGAGACATTGAAGCCCATCTGTTTG]

[+] EMBL AK060159             [CATTCCGAAGCCTTCGCCGCGTCTCGCCGGCGTACGCCGCAGGCGCCCCACCTCCTCCGGCGAGCCAGCTCGGAGCTAGACGCCTGCCCTCCCCACTCTCGCCGGCGGTGGGCGCGCGGGTGGAGCCCCTGCGTTGGCCGGACGGCGGGAGGAGATGACGGTGGCGGCGGGGTTAGGGTACGCGCTGGTCGCGCTGGGCCCCGCCTTCTCCCTCTTCGCCGGCGTCGTCGCCAGGAAGCCCTTCCTCGTCCTCACCCTTCTCACCAGCACTTTATTCTGGCTTATAAGTTTGATAATTCTCTCGGGAATATGGAGGGTATTTCTCCCTATAAGATCAGGAGCTTGGTGGCCGTATGCAATTCTTATCCTTACATCTGTTGCATTTCAAGAAGGCATTCGTCTTGTCTTTTGGAGGCTTTACAAGAAAATGGAAGAGATGCTGGATTCCTTTGCTGATAGAATATCTAAACCGCGCCTCTGTTTGACAGACAAGATGCTAATATCGTTGGCTGGTGGTTTAGGCCATGGAGTGGCTCATGCCGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCATTCGGCAGAGCTACATTTTATGTTGAAAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCAGCCATTATTTCTCTTGGATTCTTGGTCATCCACACATTCTCAATGATTATTGCTTTTAATGGGTACGACGAGAGAAAGAGAAGTGATCAAGTATTTGTCCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAATCAATCTTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGTGACGTTGCAATACTGCTGGCAAATGGTATGGCGGAGATTATCTGAGCAGCAGCATCGGCAGTTTAGCAGCTAGTGCCTGGCAATGCTCCTTACATGTATCTTCTCATGTCCAATTTTAATAATCTTTTGTTTGGGGTACTAGGGCAAGAAGTTGTAAACGTAGCGAATTAGCGATTATACCACTAGTGGGATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTGAGACATTGAAGCCCATCTGTTTG]
[+] EMBL AK104758             [CATTCCGAAGCCTTCGCCGCGTCTCGCCGGCGTACGCCGCAGGCGCCCCACCTCCTCCGGCGAGCCAGCTCGGAGCTAGACGCCTGCCCTCCCCACTCTCGCCGGCGGTGGGCGCGCGGGTGGAGCCCCTGCGTTGGCCGGACGGCGGGAGGAGATGACGGTGGCGGCGGGGTTAGGGTACGCGCTGGTCGCGCTGGGCCCCGCCTTCTCCCTCTTCGCCGGCGTCGTCGCCAGGAAGCCCTTCCTCGTCCTCACCCTTCTCACCAGCACTTTATTCTGGCTTATAAGTTTGATAATTCTCTCGGGAATATGGAGGGTATTTCTCCCTATAAGATCAGGAGCTTGGTGGCCGTATGCAATTCTTATCCTTACATCTGTTGCATTTCAAGAAGGCATTCGTCTTGTCTTTTGGAGGCTTTACAAGAAAATGGAAGAGATGCTGGATTCCTTTGCTGATAGAATATCTAAACCGCGCCTCTGTTTGACAGACAAGATGCTAATATCGTTGGCTGGTGGTTTAGGCCATGGAGTGGCTCATGCCGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCATTCGGCAGAGCTACATTTTATGTTGAAAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCAGCCATTATTTCTCTTGGATTCTTGGTCATCCACACATTCTCAATGATTATTGCTTTTAATGGGTACGACGAGAGAAAGAGAAGTGATCAAGTATTTGTCCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAATCAATCTTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGTGACGTTGCAATACTGCTGGCAAATGGTATGGCGGAGATTATCTGAGCAGCAGCATCGGCAGTTTAGCAGCTAGTGCCTGGCAATGCTCCTTACATGTATCTTCTCATGTCCAATTTTAATAATCTTTTGTTTGGGGTACTAGGGCAAGAAGTTGTAAACGTAGCGAATTAGCGATTATACCACTAGTGGGATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTGAGACATTGAAGCCCATCTGTTTG]
[+] EMBL AA752008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAATCAATCTTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGTGACGTTGCAATACTGCTGGCAAATGGTATGGCGGAAANTATCTGAACAGCAGCATCGGCAGTTTAACAACTAGTGCCTGGCAATGCTCCTTACATGTATCTNCTCATGTCCAATTTTAATAATCTTTTGTTTGGGGTACTAGGGCAAAAAATTGTAAACGTANCGAATTANCGATTATACCACTAGTGGGATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTG                       ]


>consensus_6682#1 CATTCCGAAGCCTTCGCCGCGTCTCGCCGGCGTACGCCGCAGGCGCCCCACCTCCTCCGG CGAGCCAGCTCGGAGCTAGACGCCTGCCCTCCCCACTCTCGCCGGCGGTGGGCGCGCGGG TGGAGCCCCTGCGTTGGCCGGACGGCGGGAGGAGATGACGGTGGCGGCGGGGTTAGGGTA CGCGCTGGTCGCGCTGGGCCCCGCCTTCTCCCTCTTCGCCGGCGTCGTCGCCAGGAAGCC CTTCCTCGTCCTCACCCTTCTCACCAGCACTTTATTCTGGCTTATAAGTTTGATAATTCT CTCGGGAATATGGAGGGTATTTCTCCCTATAAGATCAGGAGCTTGGTGGCCGTATGCAAT TCTTATCCTTACATCTGTTGCATTTCAAGAAGGCATTCGTCTTGTCTTTTGGAGGCTTTA CAAGAAAATGGAAGAGATGCTGGATTCCTTTGCTGATAGAATATCTAAACCGCGCCTCTG TTTGACAGACAAGATGCTAATATCGTTGGCTGGTGGTTTAGGCCATGGAGTGGCTCATGC CGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCATTCGGCAGAGCTACATTTTATGTTGA AAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCAGCCATTATTTCTCTTGGATTCTTGGT CATCCACACATTCTCAATGATTATTGCTTTTAATGGGTACGACGAGAGAAAGAGAAGTGA TCAAGTATTTGTCCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAATCAATCTTGC ACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGTGACGTTGCA ATACTGCTGGCAAATGGTATGGCGGAGATTATCTGAGCAGCAGCATCGGCAGTTTAGCAG CTAGTGCCTGGCAATGCTCCTTACATGTATCTTCTCATGTCCAATTTTAATAATCTTTTG TTTGGGGTACTAGGGCAAGAAGTTGTAAACGTAGCGAATTAGCGATTATACCACTAGTGG GATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTGAGACATTGAAGCCCA TCTGTTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6682#0      TCATTCCGAAGCCTTCGCCGCGTCTCGCCGGCGTACGCCGCAGGCGCCCCACCTCCTCCG 60
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      GCGAGCCAGCTCGGAGCTAGACGCCTGCCCTCCCCACTCTCGCCGGCGGTGGGCGCGCGG 120
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      GTGGAGCCCCTGCGTTGGCCGGACGGCGGGAGGAGATGACGGTGGCGGCGGGGTTAGGGT 180
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      ACGCGCTGGTCGCGCTGGGCCCCGCCTTCTCCCTCTTCGCCGGCGTCGTCGCCAGGAAGC 240
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      CCTTCCTCGTCCTCACCCTTCTCACCAGCACTTTATTCTGGCTTATAAGTTTGATAATTC 300
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      TCTCGGGAATATGGAGGGTATTTCTCCCTATAAGATCAGGAGCTTGGTGGCCGTATGCAA 360
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      TTCTTATCCTTACATCTGTTGCATTTCAAGAAGGCATTCGTCTTGTCTTTTGGAGGCTTT 420
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      ACAAGTAGGAAAATGGAAGAGATGCTGGATTCCTTTGCTGATAGAATATCTAAACCGCGC 480
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      CTCTGTTTGACAGACAAGATGCTAATATCGTTGGGTAAGTTCTTGCATCACTAGATCAAT 540
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      ATGTCCTTATTTCAAGATTGGCTTAATATTTCTCCATCCATCGTTTATATAGAAATTATT 600
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      TCTCTATTTGGCTTGTGTTTGCCTTGAATTTTTATTTAAAATAGGTACCCACTGATATCT 660
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      TTACCGTCATTTCATTTCTGTGAAGAAATACATATTTCATTTGGATATGGGATGAATGGT 720
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      ACCTCCATTTTTTTAGGTGGTCTACAGTTGCAACTTTTTTCCACAAAAGGAATTAAACTT 780
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      TAACTTTGTATTATTCACAACTCACAAATATCCCGTAGGTTTCTATTTTCCTGATGTGTC 840
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      ATGGGCTTGGGCCCATTTCAAGGCAGGATGGCCTGTGTGGCTGTATCACGCGATCAATAT 900
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      ACTTATTTACTATTCACATGGCAACAAACGACTTCACATCAGTTGCCTTAGAGATAAGAT 960
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      TAGATTTGCTAATCTGTTTCATAGTAGTGAAGTCATCCAATCTTTATAAGGATTGATTCT 1020
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      CTCTCTAATATTCAAGCAAGGAATAATCAAGGTCTTTAGTCTCCTTCCCTTTCTCTCTCT 1080
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      TCTCAACCAAGTCTTAGTGCCTTGGTGGCAGCAATGGCCAACCAATCAAGGGTGTCTCCT 1140
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      ACCTTGCTCCTCATACGTTCATACTTATATCCAACCAATGTCTTCAACATGGAGTAATAA 1200
consensus_6682#1      ------------------------------------------------------------
                                                                                  

consensus_6682#0      TTGCAAGCTGACGTTCTAAATTTTTTAGTTAGACTATCAAATTGACATTGACTTTGATAC 1260
consensus_6682#1      -------------------------------CATTCCGAAGCCTTCGCCGCGTCT--CGC 27
                                                      * *   **     *   *  * *    *

consensus_6682#0      AGATAAACAAAACCGTACTTGTCCTGATTTTCGTTAAAAACTACTGAGTGTAAGTTTTCA 1320
consensus_6682#1      CGGCGTACG---CCGCAGGCGCCCCACCTCCTCCGGCGAGCCA---GCTCGGAGCTAGAC 81
                       *    **    *** *   * **    *         * * *     *   ** *    

consensus_6682#0      ACACACTCTTCATGTTCTTGTTACATGGTGCACTTAACATTTTGACATACTCTTCATATT 1380
consensus_6682#1      GCCTGCCCTCCCCACTCTCGCCG------GCGGTGGGCGCGCGGGTGGAGCCCCTGCGTT 135
                       *   * ** *    *** *         **  *   *     *    *  *      **

consensus_6682#0      CTTGTTACACAGTGCACCTAACAGTGGACATAATTATAACTGCAAACGATAGGCTTTGCA 1440
consensus_6682#1      G--GCCGGACGGCG--------GGAGGAGATGACGGTGGCGGCGGG-GTTAGGGTACGCG 184
                         *    ** * *         * *** ** *   *  * **    * **** *  ** 

consensus_6682#0      GTACATATATAGGTCATCTTGGACCATCCAGTTTTAAGTTCTTATTTCATAGATTACATA 1500
consensus_6682#1      CT---------GGTCGCGCTGGGCC--CCGCCTTC----TCCCTCTTCGCCGGCGTCGTC 229
                       *         ****    *** **  **   **     **    ***   *    * * 

consensus_6682#0      AAAAAGTGCAATATGTGGTAGGCATTAAGGATTCTTAGTAAAACAATTGCAGTGCTGAGT 1560
consensus_6682#1      GCCAGG---AAGCCCTTCCTCGTCCTCACCCTTCTCACCAGCACTTT----ATTCTG-GC 281
                         * *   **    *     *   * *   **** *  *  **  *     * *** * 

consensus_6682#0      TGGTAAGGTTGGAAGATTCACTGCAAAACTACCAAGCATTCTTTTAAATGGAGTATAGAA 1620
consensus_6682#1      TTATAAGTTTGATAATTCTCTCGGGAATATGGAGGGTATTTCTCCCTATA------AGAT 335
                      *  **** ***  *  *     *  **  *     * ***  *    **       *** 

consensus_6682#0      CAGAGCCAAGGCACACATATGTGGTTCTTCATCTTGTGATTCGAAACTAGAAAATAATCA 1680
consensus_6682#1      CAGGAGCTTGGTGGCCGTATGCAATTCTT-ATCCTTACATCTG----TTGCATTTCAAGA 390
                      ***   *  **    * ****   ***** *** *   **  *    * * *  * *  *

consensus_6682#0      AAACACAAACTTGGTCTACGGTATTGGCTCAGCTGAATATTCTAAATGCAAACTGTGCAT 1740
consensus_6682#1      AGGCATTCGTCTTGTCTTTTGGA--GGCTTTACAAGAAAATGGAAG---AGATGCTGGAT 445
                      *  **      * ****   * *  ****   *   * * *  **    * *   ** **

consensus_6682#0      TCACTTATTGGTTAGTGTGAGCGTTTGTCCTTCATATCACTGTAAGTCAAAAATGATAAC 1800
consensus_6682#1      TCCTTTGCTGAT-------AGAATATCTAAACCGCGCCTCTGTTTGACAGACAAGATG-C 497
                      **  **  ** *       **  * * *    *    * ****  * ** * * ***  *

consensus_6682#0      TGCTATTGTTTGAACTTTGAAATGTCTTTGCAGCTGGTGGTTTAGGCCATGGAGTGGCTC 1860
consensus_6682#1      TAATATCGTT---------------------GGCTGGTGGTTTAGGCCATGGAGTGGCTC 536
                      *  *** ***                      ****************************

consensus_6682#0      ATGCCGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCATTCGGCAGAGCTACATTTTATG 1920
consensus_6682#1      ATGCCGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCATTCGGCAGAGCTACATTTTATG 596
                      ************************************************************

consensus_6682#0      TTGAAAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCAGCCATTATTTCTCTTGGATTCT 1980
consensus_6682#1      TTGAAAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCAGCCATTATTTCTCTTGGATTCT 656
                      ************************************************************

consensus_6682#0      TGGTCATCCACACATTCTCAATGATTATTGCTTTTAATGGGTACGACGAGAGAAAGAGAA 2040
consensus_6682#1      TGGTCATCCACACATTCTCAATGATTATTGCTTTTAATGGGTACGACGAGAGAAAGAGAA 716
                      ************************************************************

consensus_6682#0      GTGATCAAGTATTTGTCCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAATCAATC 2100
consensus_6682#1      GTGATCAAGTATTTGTCCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAATCAATC 776
                      ************************************************************

consensus_6682#0      TTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGTGACGT 2160
consensus_6682#1      TTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGTGACGT 836
                      ************************************************************

consensus_6682#0      TGCAATACTGCTGGCAAATGGTATGGCGGAGATTATCTGAGCAGCAGCATCGGCAGTTTA 2220
consensus_6682#1      TGCAATACTGCTGGCAAATGGTATGGCGGAGATTATCTGAGCAGCAGCATCGGCAGTTTA 896
                      ************************************************************

consensus_6682#0      GCAGCTAGTGCCTGGCAATGCTCCTTACATGTATCTTCTCATGTCCAATTTTAATAATCT 2280
consensus_6682#1      GCAGCTAGTGCCTGGCAATGCTCCTTACATGTATCTTCTCATGTCCAATTTTAATAATCT 956
                      ************************************************************

consensus_6682#0      TTTGTTTGGGGTACTAGGGCAAGAAGTTGTAAACGTAGCGAATTAGCGATTATACCACTA 2340
consensus_6682#1      TTTGTTTGGGGTACTAGGGCAAGAAGTTGTAAACGTAGCGAATTAGCGATTATACCACTA 1016
                      ************************************************************

consensus_6682#0      GTGGGATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTGAGAC------- 2393
consensus_6682#1      GTGGGATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTGAGACATTGAAG 1076
                      *****************************************************       

consensus_6682#0      ------------
consensus_6682#1      CCCATCTGTTTG 1088
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)