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Oryza sativa
cluster # 6712 cluster # 6712       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6712#0 length = 1285 sequences # 2  
consensus_6712#1 length = 1072 sequences # 1  
consensus_6712#2 length = 793 sequences # 1  

consensusID : consensus_6712#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1285
fasta sequence
                              [TGAAGAGTGGCTGCTTGCAGGCTTGGCTTGCAGCTGGGGAGAGAGCATGAGCAGCGGCGGCGTCGGCGGCGGGAGCTTGGGCGCCGGCTTGCTGTACCACAAGTTCGTCAGCTTCGCGCTGGAGGAGACCCGACTCCGGACCACCCTCACCCCTCACCCCTCCCAGGAAAAGTTCAAGTCTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCATTCAGTGCACCGAAAATTAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTTCTTGACTTTGCCGCTTTCTCTGAACCTGAATACGATCTTCCTATATTTTGCGCCAACGTTTTTACAACTCATGCACAAAGTATTGTTGTATTGGACCTCAATCCTCTATATGATACTACAGTGCACAAGGATTACAAAGATAAGTACTATAGGAGTATAATGCCTCTTGTACACAAGTATAACGAGGTACATGGATCTTTCCTGGCTCCACCCAACCTATTGCCTCATAAATTGTTATTTAGCTCGATATCTTTATTTAGAGGATATGCAGCTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATTGAAGTTCTTCTCTCCAATTGTGATCTGGACAATATTTGAGTCAACTGAACACAACCACCATGTTCTACATTCAGCTTTCGTGGATTATTAT-AAGGTCTGGCTTGAATTAATGGACCAAGC-AATTAAAGAAAATAACAAAGCA-ACAATTGCTCGTAACCAAGAAGAACAACATAAATATCTCACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAATACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGAGTATGATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAATGGAGAATTCATTGGCGATGCCGAAGCACAGTAAAATGTTCGCTACGCCTTTCGGCCTGATCAATCTCTCTTATGCTTGTAGTACTGTTTTC--TTTTTTTTTAGAAAACTTACATTTTTCATGCTCATATCCCTGAACTTGGATTGAATAAGAAGAGATTGGTGAATCTGAGTCATGTATTATTGTTCTCCGGTTGCACTGATTGTCGTTGTTAGACGATGGTCTCTGCTCCTGGTAGTAGACATGATCTGAAACAAGAGGGGTCATCCTGCCCTGCCCGGAT]

[+] EMBL AK061271             [TGAAGAGTGGCTGCTTGCAGGCTTGGCTTGCAGCTGGGGAGAGAGCATGAGCAGCGGCGGCGTCGGCGGCGGGAGCTTGGGCGCCGGCTTGCTGTACCACAAGTTCGTCAGCTTCGCGCTGGAGGAGACCCGACTCCGGACCACCCTCACCCCTCACCCCTCCCAGGAAAAGTTCAAGTCTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCATTCAGTGCACCGAAAATTAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTTCTTGACTTTGCCGCTTTCTCTGAACCTGAATACGATCTTCCTATATTTTGCGCCAACGTTTTTACAACTCATGCACAAAGTATTGTTGTATTGGACCTCAATCCTCTATATGATACTACAGTGCACAAGGATTACAAAGATAAGTACTATAGGAGTATAATGCCTCTTGTACACAAGTATAACGAGGTACATGGATCTTTCCTGGCTCCACCCAACCTATTGCCTCATAAATTGTTATTTAGCTCGATATCTTTATTTAGAGGATATGCAGCTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATTGAAGTTCTTCTCTCCAATTGTGATCTGGACAATATTTGAGTCAACTGAACACAACCACCATGTTCTACATTCAGCTTTCGTGGATTATTAT AAGGTCTGGCTTGAATTAATGGACCAAGC AATTAAAGAAAATAACAAAGCA ACAATTGCTCGTAACCAAGAAGAACAACATAAATATCTCACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAATACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGAGTATGATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAATGGAGAATTCATTGGCGATGCCGAAGCACAGTAAAATGTTCGCTACGCCTTTCGGCCTGATCAATCTCTCTTATGCTTGTAGTACTGTTTTC  TTTTTTTTTAGAAAACTTACATTTTTCATGCTCATATCCCTGAACTTGGATTGAATAAGAAGAGATTGGTGAATCTGAGTCATGTATTATTGTTCTCCGGTTGCACTGATTGTCGTTGTTAGACGATGGTCTCTGCTCCTGGTAGTAGACATGATCTGAAACAAGAGGGGTCATCCTGCCCTGCCCGGAT]
[+] EMBL BM038189             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGTGGATTATTATAAAGTTCTGGCTTGAATTAATGGACCAACCNATTTAAAGAAAATAACAAAGCACAC ATTGCTCGTAACCAAGAAGAAC ACATAAATATCTCACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTCGCGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAATACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGAGTATGATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACCCCCATGGAGAATTCATTGGCGATGCCGAAGCACAGTAAAATGTTCGCTAC CCTTTCGGCCTGATCAATCTCTCTTATGCTTGTAGTACTGTTTTCTTTTTTTTTTTAGAAAACTTACATTTCTCATGCTCATAT CCTGAACTTGGACCGAATAAGAAGAGATTGGTGAATCaaaaa                                                                                                              ]


>consensus_6712#0 TGAAGAGTGGCTGCTTGCAGGCTTGGCTTGCAGCTGGGGAGAGAGCATGAGCAGCGGCGG CGTCGGCGGCGGGAGCTTGGGCGCCGGCTTGCTGTACCACAAGTTCGTCAGCTTCGCGCT GGAGGAGACCCGACTCCGGACCACCCTCACCCCTCACCCCTCCCAGGAAAAGTTCAAGTC TATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCATTCAGTGCACCGAAAAT TAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTTCTTGACTTTGC CGCTTTCTCTGAACCTGAATACGATCTTCCTATATTTTGCGCCAACGTTTTTACAACTCA TGCACAAAGTATTGTTGTATTGGACCTCAATCCTCTATATGATACTACAGTGCACAAGGA TTACAAAGATAAGTACTATAGGAGTATAATGCCTCTTGTACACAAGTATAACGAGGTACA TGGATCTTTCCTGGCTCCACCCAACCTATTGCCTCATAAATTGTTATTTAGCTCGATATC TTTATTTAGAGGATATGCAGCTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATTGA AGTTCTTCTCTCCAATTGTGATCTGGACAATATTTGAGTCAACTGAACACAACCACCATG TTCTACATTCAGCTTTCGTGGATTATTATAAGGTCTGGCTTGAATTAATGGACCAAGCAA TTAAAGAAAATAACAAAGCAACAATTGCTCGTAACCAAGAAGAACAACATAAATATCTCA CATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTC GTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAAT CATTTCTGGATTATTTCCCTGAATACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGA GTATGATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAATGGAGAATTCATTGGCG ATGCCGAAGCACAGTAAAATGTTCGCTACGCCTTTCGGCCTGATCAATCTCTCTTATGCT TGTAGTACTGTTTTCTTTTTTTTTAGAAAACTTACATTTTTCATGCTCATATCCCTGAAC TTGGATTGAATAAGAAGAGATTGGTGAATCTGAGTCATGTATTATTGTTCTCCGGTTGCA CTGATTGTCGTTGTTAGACGATGGTCTCTGCTCCTGGTAGTAGACATGATCTGAAACAAG AGGGGTCATCCTGCCCTGCCCGGAT



consensusID : consensus_6712#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1072
fasta sequence
                              [CTGAAGAGTGGCTGCTTGCAGGCTTGGCTTGCAGCTGGGGAGAGAGCATGAGCAGCGGCGGCGTCGGCGGCGGGAGCTTGGGCGCCGGCTTGCTGTACCACAAGTTCGTCAGCTTCGCGCTGGAGGAGACCCGACTCCGGACCACCCTCACCCCTCACCCCTCCCAGGAAAAGTTCAAGTCTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCATTCAGTGCACCGAAAATTAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTTCTTGACTTTGCCGCTTTCTCTGAACCTGAATACGATCTTCCTATATTTTGCGCCAACGTTTTTACAACTCATGCACAAAGTATTGTTGTATTGGACCTCAATCCTCTATATGATACTACAGTGCACAAGGATTACAAAGATAAGTACTATAGGAGTATAATGCCTCTTGTACACAAGTATAACGAGCTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATTGAAGTTCTTCTCTCCAATTGTGATCTGGACAATATTTGAGTCAACTGAACACAACCACCATGTTCTACATTCAGCTTTCGTGGATTATTATAAGGTCTGGCTTGAATTAATGGACCAAGCAATTAAAGAAAATAACAAAGCAACAATTGCTCGTAACCAAGAAGAACAACATAAATATCTCACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAATACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGAGTATGATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAATGGAGAATTCATTGGCGATGCCGAAGCACAGTAAAATGTTCGCTACGCCTTTCGGCCTGATCAATCTCTCTTATGCTTGTAGTACTGTTTTCTTTTTTTTTAGAAAACTTACATTTTTCATGCTCATATCCCTGAACTTGGATTGAATAAGAA]

[+] EMBL AK101395             [CTGAAGAGTGGCTGCTTGCAGGCTTGGCTTGCAGCTGGGGAGAGAGCATGAGCAGCGGCGGCGTCGGCGGCGGGAGCTTGGGCGCCGGCTTGCTGTACCACAAGTTCGTCAGCTTCGCGCTGGAGGAGACCCGACTCCGGACCACCCTCACCCCTCACCCCTCCCAGGAAAAGTTCAAGTCTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCATTCAGTGCACCGAAAATTAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTTCTTGACTTTGCCGCTTTCTCTGAACCTGAATACGATCTTCCTATATTTTGCGCCAACGTTTTTACAACTCATGCACAAAGTATTGTTGTATTGGACCTCAATCCTCTATATGATACTACAGTGCACAAGGATTACAAAGATAAGTACTATAGGAGTATAATGCCTCTTGTACACAAGTATAACGAGCTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATTGAAGTTCTTCTCTCCAATTGTGATCTGGACAATATTTGAGTCAACTGAACACAACCACCATGTTCTACATTCAGCTTTCGTGGATTATTATAAGGTCTGGCTTGAATTAATGGACCAAGCAATTAAAGAAAATAACAAAGCAACAATTGCTCGTAACCAAGAAGAACAACATAAATATCTCACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAATACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGAGTATGATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAATGGAGAATTCATTGGCGATGCCGAAGCACAGTAAAATGTTCGCTACGCCTTTCGGCCTGATCAATCTCTCTTATGCTTGTAGTACTGTTTTCTTTTTTTTTAGAAAACTTACATTTTTCATGCTCATATCCCTGAACTTGGATTGAATAAGAA]


>consensus_6712#1 CTGAAGAGTGGCTGCTTGCAGGCTTGGCTTGCAGCTGGGGAGAGAGCATGAGCAGCGGCG GCGTCGGCGGCGGGAGCTTGGGCGCCGGCTTGCTGTACCACAAGTTCGTCAGCTTCGCGC TGGAGGAGACCCGACTCCGGACCACCCTCACCCCTCACCCCTCCCAGGAAAAGTTCAAGT CTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCATTCAGTGCACCGAAAA TTAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTTCTTGACTTTG CCGCTTTCTCTGAACCTGAATACGATCTTCCTATATTTTGCGCCAACGTTTTTACAACTC ATGCACAAAGTATTGTTGTATTGGACCTCAATCCTCTATATGATACTACAGTGCACAAGG ATTACAAAGATAAGTACTATAGGAGTATAATGCCTCTTGTACACAAGTATAACGAGCTTC TTCCTTGGGGTGGCAAGATTACGAGTGAGTCATTGAAGTTCTTCTCTCCAATTGTGATCT GGACAATATTTGAGTCAACTGAACACAACCACCATGTTCTACATTCAGCTTTCGTGGATT ATTATAAGGTCTGGCTTGAATTAATGGACCAAGCAATTAAAGAAAATAACAAAGCAACAA TTGCTCGTAACCAAGAAGAACAACATAAATATCTCACATGGAGGGCTGAGAAGGATCCTG GCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGT TTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAAT ACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGAGTATGATCGGCAAGTCTTTTGAAA CTAGGCCTTGGGACGCCAATGGAGAATTCATTGGCGATGCCGAAGCACAGTAAAATGTTC GCTACGCCTTTCGGCCTGATCAATCTCTCTTATGCTTGTAGTACTGTTTTCTTTTTTTTT AGAAAACTTACATTTTTCATGCTCATATCCCTGAACTTGGATTGAATAAGAA



consensusID : consensus_6712#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 793
fasta sequence
                              [CNCTGGNAANCCTAGCTTTCATATGTGAACCAAATTAATCCCTTGTAACCAATGACATACCNTAATCGTTGTTTCTTTAGTCGCAACCAAGTGATTGTGATTACTTGTTTAATCTTGTGAAGAAGCAGGCTACCAAGCATAGACATTTGATTGTGCGATTTATTTATTTATAGTAGTATCTATCAGAGCTATGTCGCCCAATAGTGGCAGCTAGCTTCAACCATGTTTCTAAGCCCTGTCTCAGGCTGTCAATATTTCTGTCTCATGTAAATGTAAGTAGTTGACCTTGTATTGTTTTATGCTTCCAGGAAAAGTTCAAGTCTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCACTCAGTGCACCGAAAATTAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTATTTAATCTATGTTGGAGATTTCTGTTCAAGTTTACTTGATCAAAACTCTCCTAACAATACCACAAGTCCACAATGTTGCTTTCCCTGACTTATCTCCTATTCCCCTGTGCTTTAAACATTGTCCTGGTTCTGCTTCATTGTGATTTGGAACGTTTATATCCAGTCATAGTTCTACAACACGATCCACGTTAAATCTTTCGTTGATCTTTCACTGAAAAAAAAAAAACGTATTGCTTTGATTTGATCAATTTATGACTATTCTTTTTCTACAATGCAACAAATTAAAAGTGTTGACCCGCCAGCTTACGTCATGTTTTACCATTCTCCATATAACATGTGAAGAGTTTTGCTTGCTAGTTACA]

[-] EMBL CA766520             [CNCTGGNAANCCTAGCTTTCATATGTGAACCAAATTAATCCCTTGTAACCAATGACATACCNTAATCGTTGTTTCTTTAGTCGCAACCAAGTGATTGTGATTACTTGTTTAATCTTGTGAAGAAGCAGGCTACCAAGCATAGACATTTGATTGTGCGATTTATTTATTTATAGTAGTATCTATCAGAGCTATGTCGCCCAATAGTGGCAGCTAGCTTCAACCATGTTTCTAAGCCCTGTCTCAGGCTGTCAATATTTCTGTCTCATGTAAATGTAAGTAGTTGACCTTGTATTGTTTTATGCTTCCAGGAAAAGTTCAAGTCTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCACTCAGTGCACCGAAAATTAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTATTTAATCTATGTTGGAGATTTCTGTTCAAGTTTACTTGATCAAAACTCTCCTAACAATACCACAAGTCCACAATGTTGCTTTCCCTGACTTATCTCCTATTCCCCTGTGCTTTAAACATTGTCCTGGTTCTGCTTCATTGTGATTTGGAACGTTTATATCCAGTCATAGTTCTACAACACGATCCACGTTAAATCTTTCGTTGATCTTTCACTGAAAAAAAAAAAACGTATTGCTTTGATTTGATCAATTTATGACTATTCTTTTTCTACAATGCAACAAATTAAAAGTGTTGACCCGCCAGCTTACGTCATGTTTTACCATTCTCCATATAACATGTGAAGAGTTTTGCTTGCTAGTTACA]


>consensus_6712#2 CNCTGGNAANCCTAGCTTTCATATGTGAACCAAATTAATCCCTTGTAACCAATGACATAC CNTAATCGTTGTTTCTTTAGTCGCAACCAAGTGATTGTGATTACTTGTTTAATCTTGTGA AGAAGCAGGCTACCAAGCATAGACATTTGATTGTGCGATTTATTTATTTATAGTAGTATC TATCAGAGCTATGTCGCCCAATAGTGGCAGCTAGCTTCAACCATGTTTCTAAGCCCTGTC TCAGGCTGTCAATATTTCTGTCTCATGTAAATGTAAGTAGTTGACCTTGTATTGTTTTAT GCTTCCAGGAAAAGTTCAAGTCTATAAAACCCAATGATGATAATACAGTTTTCAATGCTC TCTCACTCAGTGCACCGAAAATTAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACT CATATCAGGTATTTAATCTATGTTGGAGATTTCTGTTCAAGTTTACTTGATCAAAACTCT CCTAACAATACCACAAGTCCACAATGTTGCTTTCCCTGACTTATCTCCTATTCCCCTGTG CTTTAAACATTGTCCTGGTTCTGCTTCATTGTGATTTGGAACGTTTATATCCAGTCATAG TTCTACAACACGATCCACGTTAAATCTTTCGTTGATCTTTCACTGAAAAAAAAAAAACGT ATTGCTTTGATTTGATCAATTTATGACTATTCTTTTTCTACAATGCAACAAATTAAAAGT GTTGACCCGCCAGCTTACGTCATGTTTTACCATTCTCCATATAACATGTGAAGAGTTTTG CTTGCTAGTTACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6712#0      -TGAAGAGTGGCTGCTTGCAGGCTTGGCTTGCAGCTGGGGAGAGAGCATGAGCAGCGGCG 59
consensus_6712#1      CTGAAGAGTGGCTGCTTGCAGGCTTGGCTTGCAGCTGGGGAGAGAGCATGAGCAGCGGCG 60
consensus_6712#2      ------------------------------------------------------------
                                                                                  

consensus_6712#0      GCGTCGGCGGCGGGAGCTTGGGCGCCGGCTTGCTGTACCACAAGTTCGTCAGCTTCGCGC 119
consensus_6712#1      GCGTCGGCGGCGGGAGCTTGGGCGCCGGCTTGCTGTACCACAAGTTCGTCAGCTTCGCGC 120
consensus_6712#2      ------------------------------------------------------------
                                                                                  

consensus_6712#0      TGGAGGAGACCCGACTCCGGACCACCCTCACCCCTCACCCCTCCCAGGAAAAGTTCAAGT 179
consensus_6712#1      TGGAGGAGACCCGACTCCGGACCACCCTCACCCCTCACCCCTCCCAGGAAAAGTTCAAGT 180
consensus_6712#2      --------------CNCTGG--NAANCCTAGCTTTCATATGT----GAACCAAATTAATC 40
                                    * * **   *  *  * *  ***    *    * *  *  * **  

consensus_6712#0      CTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCATTCAGTGCACCGAAAA 239
consensus_6712#1      CTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCATTCAGTGCACCGAAAA 240
consensus_6712#2      CCTTGTAACC-AATGAC----ATACCNTAATCGTTGTTTCTTTAGTCGCAACCAAGTGAT 95
                      *  *  **** *****     ****  *  **  ** *   * * **    *   *  * 

consensus_6712#0      TTAGATTGCTT-CGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTTCTTGACTTT 298
consensus_6712#1      TTAGATTGCTT-CGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTTCTTGACTTT 299
consensus_6712#2      TGTGATTACTTGTTTAATCTTGTGAAGAAGCAGGCTACCAAGCAT-AGACATTTGATTGT 154
                      *  **** ***    *   *    *   ** **   * *    ** **    **** * *

consensus_6712#0      GCCGCTTTCTCTGAACCTGAATACGATCTTCCTATATTTTGCGCCAACGTTTTTACAACT 358
consensus_6712#1      GCCGCTTTCTCTGAACCTGAATACGATCTTCCTATATTTTGCGCCAACGTTTTTACAACT 359
consensus_6712#2      GCGATTTATTT--ATTTATAGTAGTATCTATCAGAGCTATGTCGCCCAATAGTGGCAGCT 212
                      **   **  *   *     * **  ****  *     * **   *    *  *  ** **

consensus_6712#0      CATGCACAAAGTATTGTTGTATTGGACCTCAATCCTCTATATGATACTACAGTGCACAAG 418
consensus_6712#1      CATGCACAAAGTATTGTTGTATTGGACCTCAATCCTCTATATGATACTACAGTGCACAAG 419
consensus_6712#2      AGCTTCAACCATGTTTCTAAGCCCTGTCTCAGGCTGTCA----ATATTTCTGT-CTCA-- 265
                             *   * **  *         ****  *    *    *** * * ** * **  

consensus_6712#0      GATTACAAAGATAAGTACTATAGGAGTATAATGCCTCTTGTACACAAGTATAACGAGGTA 478
consensus_6712#1      GATTACAAAGATAAGTACTATAGGAGTATAATGCCTCTTGTACACAAGTATAACGAG--- 476
consensus_6712#2      ---TGTAAATGTAAGTAGT-TGACCTTGTATTGTTTTATGCTTCCAGGAAAAGT------ 315
                         *  ***  ****** * *     * ** **  *  **    ** * * *        

consensus_6712#0      CATGGATCTTTCCTGGCTCCACCCAACCTATTGCCTCATAAATTGTTATTTAGCTCGATA 538
consensus_6712#1      ------------------------------------------------------------
consensus_6712#2      ------------------------------------------------------------
                                                                                  

consensus_6712#0      TCTTTATTTAGAGGATATGCAGCTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATT 598
consensus_6712#1      ----------------------CTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATT 514
consensus_6712#2      ----------------------TCAAGTCTATAAAACCCAATGATGATAATACAGTTTTC 353
                                                 **  *        * *** *  *   ***  * 

consensus_6712#0      GAAGTTCTTCTCTCCAAT----TGTGATCTGGACAATATTTGAGT----CAACTGAACAC 650
consensus_6712#1      GAAGTTCTTCTCTCCAAT----TGTGATCTGGACAATATTTGAGT----CAACTGAACAC 566
consensus_6712#2      AATGCTCTCTCACTCAGTGCACCGAAAATTAGATTGCTTCGCAGCTTGACAATCGAGAAG 413
                       * * ***      ** *     *  *  * **     *   **     ***  **  * 

consensus_6712#0      AACCAC-CATGTTCTACATTCAGCTTTCGTGGATTATTATAAGGTCTGGCTTGAATTAAT 709
consensus_6712#1      AACCAC-CATGTTCTACATTCAGCTTTCGTGGATTATTATAAGGTCTGGCTTGAATTAAT 625
consensus_6712#2      AAAAACTCATATCAGGTATTTAATCTATGTTGGAGATTTCT--GTTCAAGTTTACTTGAT 471
                      **  ** *** *     *** *   *  ** *   ***     **     ** * ** **

consensus_6712#0      GGACCAAGCAATTAAAGAAAATAACAAAGCAACAATTGCTCGTAACCAAGAAGAACAACA 769
consensus_6712#1      GGACCAAGCAATTAAAGAAAATAACAAAGCAACAATTGCTCGTAACCAAGAAGAACAACA 685
consensus_6712#2      CAA--AACTCTCCTAACAATACCACAAGTCCACAAT-GTTGCTTTCCCTGACTTATCTCC 528
                        *  **       ** ** *  ****  * ***** * *  *  **  **   *   * 

consensus_6712#0      TAAATATCT-CACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAA 828
consensus_6712#1      TAAATATCT-CACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAA 744
consensus_6712#2      TATTCCCCTGTGCTTTAAACATTGTCCTGGTTCTGCTTCATTGTGATTTGGAACGTTTAT 588
                      **     **   * *  *    **    ** **      **     **** *    *** 

consensus_6712#0      TT--GGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATAC 886
consensus_6712#1      TT--GGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATAC 802
consensus_6712#2      ATCCAGTCATAGTTCTACAACACGATCCACGTTAAATCTTTCGTT-----GATCTTTCAC 643
                       *   ** * ***  * *            * *  *  **  ***     **      **

consensus_6712#0      TCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAAT-ACGCCCGTGATGATGGGTCAG 945
consensus_6712#1      TCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAAT-ACGCCCGTGATGATGGGTCAG 861
consensus_6712#2      TGAAAAAAAAAAAACGTATTGCTTTGATTTGATCAATTTATGACTATTCTTTTTCTACAA 703
                      *     ** **** * * *     * ****     * * * * *  *  *  *    ** 

consensus_6712#0      TGAACAAGAAAAGGAGTAT-GATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAAT 1004
consensus_6712#1      TGAACAAGAAAAGGAGTAT-GATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAAT 920
consensus_6712#2      TGCAACAAATTAAAAGTGTTGACCCGCCAGCTT----ACGTCATGTTTTACCAT-TCTCC 758
                      ** *  * *  *  *** * ** * ** **  *    *    * *  **   *   *   

consensus_6712#0      GGAGAATTCATTGGCGATGCCGAAGCACAGTAAAATGTTCGCTACGCCTTTCGGCCTGAT 1064
consensus_6712#1      GGAGAATTCATTGGCGATGCCGAAGCACAGTAAAATGTTCGCTACGCCTTTCGGCCTGAT 980
consensus_6712#2      ATATAACATGTGAAGAGTTTTGCTTGCTAGTTACA------------------------- 793
                        * **    *      *   *      *** * *                         

consensus_6712#0      CAATCTCTCTTATGCTTGTAGTACTGTTTTCTTTTTTTTTAGAAAACTTACATTTTTCAT 1124
consensus_6712#1      CAATCTCTCTTATGCTTGTAGTACTGTTTTCTTTTTTTTTAGAAAACTTACATTTTTCAT 1040
consensus_6712#2      ------------------------------------------------------------
                                                                                  

consensus_6712#0      GCTCATATCCCTGAACTTGGATTGAATAAGAAGAGATTGGTGAATCTGAGTCATGTATTA 1184
consensus_6712#1      GCTCATATCCCTGAACTTGGATTGAATAAGAA---------------------------- 1072
consensus_6712#2      ------------------------------------------------------------
                                                                                  

consensus_6712#0      TTGTTCTCCGGTTGCACTGATTGTCGTTGTTAGACGATGGTCTCTGCTCCTGGTAGTAGA 1244
consensus_6712#1      ------------------------------------------------------------
consensus_6712#2      ------------------------------------------------------------
                                                                                  

consensus_6712#0      CATGATCTGAAACAAGAGGGGTCATCCTGCCCTGCCCGGAT 1285
consensus_6712#1      -----------------------------------------
consensus_6712#2      -----------------------------------------
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)