These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6754#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1320 fasta sequence [AAGGGAGAAATCCAAACGCCCGAAAAATCTAGCCATGGTTCTCCTCGCCGCCGCCGCCGTCGGGCCACACAAAACCCTAAACCCTACCCTGAGCCCGCCGAGCTCCGGCGGCCGCCGCCCCCGCCTCCGCTTCCCGCTGCCCCTTCCGCGGGGCGGCCACCTCCGCTGCTCCGCGGGGTACCGCGAGGCGGCGGCGGCAGCGGCGTCGACGTCGTCGACGACGACGACGCCGCGGCCGACGGAGATCCCGTGGAGCAGGGAGCTCTGCAACTCCGTTCGGCTCATCGGGACGGTGGGCACCGAGGTGGAGCTGCGGCAGCTGCCCAGCGGCGGCTCCGTCGCGCGGGGGCGCCTCGCCATCTGGAAGTCGGCCACCGAGACCACATGGGTGACTCTAGCATTTTGGGATGACCTAGCGGTTGTGGCTTCTGAGCATGTGAAGAAGGGTGACCGAATATTTGTTTCTGGACGCCTTGTGTCGGACACTGTTGATGAGGGCCCTGAGAAACGACAGGTTTATTATAAGGTTGTGGTTCAACAGTTCAATTTCATTGAGTCCTTTCAGCAAGTGCAGTTATATGAGCCAGAGGCAGGCCTGGATACCTTAGGTGGAAAGCATGGAGATTATGTTGGTTCTACCTCTGGCTCGAGTGAGGGTAAAAGTAGGGACCATGTTGACTCATCCTCCCGTTCAACTGAACAGTTGTGGCAAGCCTTCTTTGCTAATCCTTTTGACTGGTGGGATAACAGGACAAATAAGAAGAACCCGAGGTATCCAGACTTCAAGCACAAACACACCGGTGAAGCATTGTGGGTTGATGGGAGGAACAATCCAAATTGGGTTATCTCCCAGTTGGCAATTCTGGACTCGAGAATGGGTTCTCTTCAAGGCAATGATAGGAAACCAGTTGCCTTTATGTATGCTGATGACTTCATGACACCTGACACCGACACTGAAGCCCATATGTGAAAGGAAACCTCCCATTCACCGATTTATCATAGCACTATGTATTAGATAGAAAATGTACTACTGCGATAGTGCACCTGCGCTCCTTCAATTTTGTTGTACATAGGTAGAATCGTGAAGTTTACCATAGAGGCGTGCGGCCATCTGTTGTAGTCAGTAGTAATGACAAATGCAGATGTAGTAAAGAATCGGATGGCCTTCCCTTAAATTTGCCTGAGAAACGGTGTACATCACTTGGTGTGTTTGCATCAGCTGAGCCTCAACTGACAAGTGACTTAATTACATTGGCATGCTCATTGGCTTAGATGGTGCAACAATGCAATCATCATCATATCTGCCATGAGTTGTGACCT] [+] EMBL AK068169 [AAGGGAGAAATCCAAACGCCCGAAAAATCTAGCCATGGTTCTCCTCGCCGCCGCCGCCGTCGGGCCACACAAAACCCTAAACCCTACCCTGAGCCCGCCGAGCTCCGGCGGCCGCCGCCCCCGCCTCCGCTTCCCGCTGCCCCTTCCGCGGGGCGGCCACCTCCGCTGCTCCGCGGGGTACCGCGAGGCGGCGGCGGCAGCGGCGTCGACGTCGTCGACGACGACGACGCCGCGGCCGACGGAGATCCCGTGGAGCAGGGAGCTCTGCAACTCCGTTCGGCTCATCGGGACGGTGGGCACCGAGGTGGAGCTGCGGCAGCTGCCCAGCGGCGGCTCCGTCGCGCGGGGGCGCCTCGCCATCTGGAAGTCGGCCACCGAGACCACATGGGTGACTCTAGCATTTTGGGATGACCTAGCGGTTGTGGCTTCTGAGCATGTGAAGAAGGGTGACCGAATATTTGTTTCTGGACGCCTTGTGTCGGACACTGTTGATGAGGGCCCTGAGAAACGACAGGTTTATTATAAGGTTGTGGTTCAACAGTTCAATTTCATTGAGTCCTTTCAGCAAGTGCAGTTATATGAGCCAGAGGCAGGCCTGGATACCTTAGGTGGAAAGCATGGAGATTATGTTGGTTCTACCTCTGGCTCGAGTGAGGGTAAAAGTAGGGACCATGTTGACTCATCCTCCCGTTCAACTGAACAGTTGTGGCAAGCCTTCTTTGCTAATCCTTTTGACTGGTGGGATAACAGGACAAATAAGAAGAACCCGAGGTATCCAGACTTCAAGCACAAACACACCGGTGAAGCATTGTGGGTTGATGGGAGGAACAATCCAAATTGGGTTATCTCCCAGTTGGCAATTCTGGACTCGAGAATGGGTTCTCTTCAAGGCAATGATAGGAAACCAGTTGCCTTTATGTATGCTGATGACTTCATGACACCTGACACCGACACTGAAGCCCATATGTGAAAGGAAACCTCCCATTCACCGATTTATCATAGCACTATGTATTAGATAGAAAATGTACTACTGCGATAGTGCACCTGCGCTCCTTCAATTTTGTTGTACATAGGTAGAATCGTGAAGTTTACCATAGAGGCGTGCGGCCATCTGTTGTAGTCAGTAGTAATGACAAATGCAGATGTAGTAAAGAATCGGATGGCCTTCCCTTAAATTTGCCTGAGAAAC ] [+] EMBL AK059181 [ CGCCCGAAAAATCTAGCCATGGTTCTCCTCGCCGCCGCCGCCGTCGGGCCACACAAAACCCTAAACCCTACCCTGAGCCCGCCGAGCTCCGGCGGCCGCCGCCCCCGCCTCCGCTTCCCGCTGCCCCTTCCGCGGGGCGGCCACCTCCGCTGCTCCGCGGGGTACCGCGAGGCGGCGGCGGCAGCGGCGTCGACGTCGTCGACGACGACGACGCCGCGGCCGACGGAGATCCCGTGGAGCAGGGAGCTCTGCAACTCCGTTCGGCTCATCGGGACGGTGGGCACCGAGGTGGAGCTGCGGCAGCTGCCCAGCGGCGGCTCCGTCGCGCGGGGGCGCCTCGCCATCTGGAAGTCGGCCACCGAGACCACATGGGTGACTCTAGCATTTTGGGATGACCTAGCGGTTGTGGCTTCTGAGCATGTGAAGAAGGGTGACCGAATATTTGTTTCTGGACGCCTTGTGTCGGACACTGTTGATGAGGGCCCTGAGAAACGACAGGTTTATTATAAGGTTGTGGTTCAACAGTTCAATTTCATTGAGTCCTTTCAGCAAGTGCAGTTATATGAGCCAGAGGCAGGCCTGGATACCTTAGGTGGAAAGCATGGAGATTATGTTGGTTCTACCTCTGGCTCGAGTGAGGGTAAAAGTAGGGACCATGTTGACTCATCCTCCCGTTCAACTGAACAGTTGTGGCAAGCCTTCTTTGCTAATCCTTTTGACTGGTGGGATAACAGGACAAATAAGAAGAACCCGAGGTATCCAGACTTCAAGCACAAACACACCGGTGAAGCATTGTGGGTTGATGGGAGGAACAATCCAAATTGGGTTATCTCCCAGTTGGCAATTCTGGACTCGAGAATGGGTTCTCTTCAAGGCAATGATAGGAAACCAGTTGCCTTTATGTATGCTGATGACTTCATGACACCTGACACCGACACTGAAGCCCATATGTGAAAGGAAACCTCCCATTCACCGATTTATCATAGCACTATGTATTAGATAGAAAATGTACTACTGCGATAGTGCACCTGCGCTCCTTCAATTTTGTTGTACATAGGTAGAATCGTGAAGTTTACCATAGAGGCGTGCGGCCATCTGTTGTAGTCAGTAGTAATGACAAATGCAGATGTAGTAAAGAATCGGATGGCCTTCCCTTAAATTTGCCTGAGAAACGGTGTACATCACTTGGTGTGTTTGCATCAGCTGAGCCTCAACTGACAAGTGACTTAATTACATTGGCATGCTCATTGGCTTAGATGGTGCAACAATGCAATCATCATCATATCTGCCATGAGTTGTGACCT] [+] EMBL CA999391 [ AGGTGGAGCTGCGGCAGCTGCCCAGCGGCGGCTCCGTCGCGCGGGGGCGCCTCGCCATCTGGAAGTCGGCCACCGAGACCACATGGGTGACTCTAGCATTTTGGGATGACCTAGCGGTTGTGGCTTCTGAGCATGTGAAGAAGGGTGACCGAATATTTGTTTCTGGACGCCTTGTGTCGGACACTGTTGATGAGGGCCCTGAGAAACGACAGGTTTATTATAAGGTTGTGGTTCAACAGTTCAATTTCATTGAGTCCTTTCAGCAAGTGCAGTTATATGAGCCAGAGGCAGGCCTGGATACCTTAGGTGGAAAGCATGGAGATTATGTTGGTTCTACCTCTGGCTCGAGTGAGGGGTAAAGTAGGGACCATGTTGACTCATCCTCCCGTTCAACTGAACAGTTGTGGC ] [+] EMBL AT003457 [ GGTTCTACCTCTGGCTCGAGTGAGGGTAAAAGTAGGGACCATGTTGACTCATCCTCCCGTTCAACTGAACAGTTGTGGCAAGCCTTCTTTGCTAATCCTTTTGACTGGTGGGATAACAGGACAAATAAGAAGAACCCGAGGTATCCAGACTTCAAGCACAAACACACCGGTGAAGCATTGTGGGTTGATGGGAGGAACAATCCAAATTGGGTTATCTCCCAGTTGGCAATTCTGGACTCGAGAATGGGTTCTCTTCAAGGCAATGATAGGAAACCAGTTGCCTTTATGTATGCTGATGACTTCATGACACCTGACACCGACACTGAAGCCCATATGTGAAAGGAAACCTCCCATTCACCGATTTATCATAGCACTATGTATTAGATAGAAAATGTACTACTGCGATAGTGCACCTGCGCTCCTTCAATTTTGTTGTACATAGGTAGAATCGTGAAGTTTACCATAGAGGCGTGCGGCCATCTGTTGTAGTCAGTAGTAATGACAAATGCAGATGTAGTAAAGAATCGGATGGCCTTCCCTTAAAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||