Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6756 cluster # 6756       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6756#0 length = 946 sequences # 4  

consensusID : consensus_6756#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 946
fasta sequence
                              [CGTTCACCGGTGACCTGTAGCCACGCGCGTGGTAAATACGAAGCCCACGGCGGCGGCGGCCGCAGCAGCGAAGCCTGCGCCTCTCGCTCGCCTGACCTCCATCTCACATCCTCCTCCGCCTCTCTCCGATTCCGAGACCCTCGCCGCGGCGGCGAACGAAGGATGCCGGCGATGGCCTGCGGCGCCCGCGCGGGGGCCGCCTTCCCCTCCCCCCGCCCCGCCCGCGCCCCGTGGCCTCCCGGGCGCTTCCGGGCCCTTGTCCCTGCTCCGCCCGCGCTGCGGCTAGGGCTCCTCCGCCTTCCCCCTCCCATGGCCTCCACCATCGACTCACCCGGGAGCTCCTCCGACTTCGCCAAGCGCATGGAGCGCGCGT-GGCTCATCTCCCAGCAACCAAGACCTAACCCATGTTCATCTTGTCAATCTGCTGGGCACGTGGAGTGCA-AGTGGTGTACCGGCACAGGTTTCTTTATCCTCGGCAACAACATGTTGTGTGAAGTACCCTCAAAAAACACGAAATGTGTGATATGCTCTGGAAAGGGCTTCGCAACTTGTGCTGATTGCAAAGGAACTGGGTTTCGTGCCAAGTGGCTTGAGGATCCTCCTGTCGACAAATGAAGCAGAGGAAGTTTACCATACCGTAAAACTTTTCTAGTTAAAATTAATCTTTGCTAATTGTATGTACATCTGTTCATATTCCTCTGTACGTACAAGTGGTACTATGATATTTTTGCACTGCCTCAGCTATTTCCCTATGCTGATAAGNCTTGAATTTTTCATTACATCCTTTGTGTAACATACAAAATTACAAAGAGGTAACTCCCCTNTCATATGTGTAGACTTTTGATTCAACCGTNTGCAGACGTGCAGAAAAAAACAGGATTGTAATTCCCTTTTNTCAGCATAAGATAATAACAATTATGTATGTAAGAAGGTAAAAAAAAAAAAA]

[+] EMBL AK061595             [CGTTCACCGGTGACCTGTAGCCACGCGCGTGGTAAATACGAAGCCCACGGCGGCGGCGGCCGCAGCAGCGAAGCCTGCGCCTCTCGCTCGCCTGACCTCCATCTCACATCCTCCTCCGCCTCTCTCCGATTCCGAGACCCTCGCCGCGGCGGCGAACGAAGGATGCCGGCGATGGCCTGCGGCGCCCGCGCGGGGGCCGCCTTCCCCTCCCCCCGCCCCGCCCGCGCCCCGTGGCCTCCCGGGCGCTTCCGGGCCCTTGTCCCTGCTCCGCCCGCGCTGCGGCTAGGGCTCCTCCGCCTTCCCCCTCCCATGGCCTCCACCATCGACTCACCCGGGAGCTCCTCCGACTTCGCCAAGCGCATGGAGCGCGCGT GGCTCATCTCCCAGCAACCAAGACCTAACCCATGTTCATCTTGTCAATCTGCTGGGCACGTGGAGTGCA AGTGGTGTACCGGCACAGGTTTCTTTATCCTCGGCAACAACATGTTGTGTGAAGTACCCTCAAAAAACACGAAATGTGTGATATGCTCTGGAAAGGGCTTCGCAACTTGTGCTGATTGCAAAGGAACTGGGTTTCGTGCCAAGTGGCTTGAGGATCCTCCTGTCGACAAATGAAGCAGAGGAAGTTTACCATACCGTAAAACTTTTCTAGTTAAAATTAATCTTTGCTAATTGTATGTACATCTGTTCATATTCCTCTGTACGTACAAGTGGTACTATGATATTTTTGCAC                                                                                                                                                                                                                     ]
[+] EMBL CA755421             [                                                                                                                                                       GCGAACGAAGGATGCCGGCGATGGCCTGCGGCGCCCGCGCGGGGGCCGCCTTCCCCTCCCCCCGCCCCGCCCGCGCCCCGTGGCCTCCCGGGCGCTTCCGGGCCCTTGTCCCTGCTCCGCCCGCGCTGCGGCTAGGGCTCCTCCGCCTTCCCCCTCCCATGGCCTCCACCATCGACTCACCCGGGAGCTCCTCCGACTTCGCCAAGCGCATGGAGCGCGCGT GGCTCATCTCCCAGCAACCAAGACCTAACCCATGTTCATCTTGTCAATCTGCTGGGCACGTGGAGTGCA AGTGGTGTACCGGCACAGGTTTCTTTATCCTCGGCAACAACATGTTGTGTGAAGTACCCTCAAAAAACACGAAATGTGTGATATGCTCTGGAAAGGGCTTCGCAACTTGTGCTGATTGCAAAGGAACTGGGTTTCGTGCCAAGTGGCTTGAGGATCCTCCTGTCGACNAATGAAGCAGAGGAAGTCTACCATACCGTAGAACTTTTCTAGTTCAAATTAATCTTTGCTAATTGTATGTACATCTGTTCATATCCCTCTGTACGTACAAGTGGTACTATGATATTTTTGCACTGCCTCAGCTATTTCCCTATGGTGAT                                                                                                                                                                                           ]
[+] EMBL OSC9271              [                                                                                                                                                                                                                                                                                                                                          CCCGGGAGCTCCTCCGACTTCGCCAAGCGCATGGAGCGC NGTNGGCTCATCTCCCAGCAACCAAGACCTAACCCATGTTCATCTTGTCAATCTGCTGGGCACGTGGAGT CANAGTGGTGTACCGGCACAGGTTTCTTTATCCTCGGCAACAACATGTTGTGTGAAGTACCCTCAAAAAACACGAAATGTGTGATATGCTCTGGAAAGGGCTTCGCAACTTGTGCTGATTGCAAAGGAACTGGGTTTCGTGCCAAGTGGCTTGAGGATCCTCCTGTCGACAAATGAAGCAGAGGAAGTTTACCATACCGTAAAACTTTTCTAGTTAAAATTAATCTTTGCTAATTGTATGTACATCTGTTCATATTCCTCTGTACGTACAAGTGGGACTATGATATTTTTGCACTGCCTCAGCTATTTCCCTATGCTGATAAGNCTTGAA                                                                                                                                                                                 ]
[+] EMBL AU174114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACACGAAATGTGTGATATGCTCTGGAAAGGGCTTCGCAACTTGTGCTGATTGCAAAGGAACTGGGTTTCGTGCCAAGTGGCTTGAGGATCCTCCTGTCGACAAATGAAGCAGAGGAAGTTTACCATACCGTAAAACTTTTCTAGTTAAAATTAATCTTTGCTAATTGTATGTACATCTGTTCATATTCCTCTGTACGTACAAGTGGTACTATGATATTTTTGCACTGCCTCAGCTATTTCCCTATGCTGATAAGTCTTGAATTTTTCATTACATCCTTTGTGTAACATACAAAATTACAAAGAGGTAACTCCCCTNTCATATGTGTAGACTTTTGATTCAACCGTNTGCAGACGTGCAGAAAAAAACAGGATTGTAATTCCCTTTTNTCAGCATAAGATAATAACAATTATGTATGTAAGAAGGTAAAAAAAAAAAAA]


>consensus_6756#0 CGTTCACCGGTGACCTGTAGCCACGCGCGTGGTAAATACGAAGCCCACGGCGGCGGCGGC CGCAGCAGCGAAGCCTGCGCCTCTCGCTCGCCTGACCTCCATCTCACATCCTCCTCCGCC TCTCTCCGATTCCGAGACCCTCGCCGCGGCGGCGAACGAAGGATGCCGGCGATGGCCTGC GGCGCCCGCGCGGGGGCCGCCTTCCCCTCCCCCCGCCCCGCCCGCGCCCCGTGGCCTCCC GGGCGCTTCCGGGCCCTTGTCCCTGCTCCGCCCGCGCTGCGGCTAGGGCTCCTCCGCCTT CCCCCTCCCATGGCCTCCACCATCGACTCACCCGGGAGCTCCTCCGACTTCGCCAAGCGC ATGGAGCGCGCGTGGCTCATCTCCCAGCAACCAAGACCTAACCCATGTTCATCTTGTCAA TCTGCTGGGCACGTGGAGTGCAAGTGGTGTACCGGCACAGGTTTCTTTATCCTCGGCAAC AACATGTTGTGTGAAGTACCCTCAAAAAACACGAAATGTGTGATATGCTCTGGAAAGGGC TTCGCAACTTGTGCTGATTGCAAAGGAACTGGGTTTCGTGCCAAGTGGCTTGAGGATCCT CCTGTCGACAAATGAAGCAGAGGAAGTTTACCATACCGTAAAACTTTTCTAGTTAAAATT AATCTTTGCTAATTGTATGTACATCTGTTCATATTCCTCTGTACGTACAAGTGGTACTAT GATATTTTTGCACTGCCTCAGCTATTTCCCTATGCTGATAAGNCTTGAATTTTTCATTAC ATCCTTTGTGTAACATACAAAATTACAAAGAGGTAACTCCCCTNTCATATGTGTAGACTT TTGATTCAACCGTNTGCAGACGTGCAGAAAAAAACAGGATTGTAATTCCCTTTTNTCAGC ATAAGATAATAACAATTATGTATGTAAGAAGGTAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)