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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6773#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1583 fasta sequence
[GCCGCGCCGCACTCCTGTCTGTCTCTGCACTCTCGGACTCGTCTCCCATCCCTGGGGCGTGGGATCCCCTTCCGACCAAGGCAAGGCGAGGCGACCACCTGTCGCCGCCGCCGCCGCCGCCATGAAGCCTCCGCGGCGCCGCTATGGTTTACTCGCGGTGGTCGTCACTCTCATCGTCCTCGCCTCCCTCCAGATCCAGTTCCACCACCTCAAGGAGGACCGTCTCACCGGGGACCGCACCTTCGCCACCACCACCACCGACCCCGTTCACTGGCGGACCGGCGCCGAGGGCCTGCCACGCGGCATTGTTCACTCCAACTCCGACATGTACCTCCGCCCTCTCTGGGACTCTGGCGCCAACCCCAAGAATAAAAACGATAATCACAATGCTCTTTTGGCGATGGCAGTCGGCATTTCACAAATGCAGAATGTAGACATTATGGCCCGTAAGTTTCTTAACCAAAACTACACAGTCATGCTCTTCCATTATGACGGGAATGTAGATGGATGGCACAATCTTGAGTGGAGTGATAAGGCCATACACATACTTGCTCGTAACCAAACAAAGTGGTGGTTTGCTAAGCGCTTTCTACATCCTGATGTTGTGGCTATCTACGGTTTTATCTTTTTATGGGATGAAGACCTTGGAGTGGACAACTTTGACCCGAGAAGATATCTTGATATAATGGTTTCTGAAGGATTGGAAATTACACAACCTGCTCTGGACCCTGATCTATCGACTGATATTCACCATCGGATCACAATCCGCAACAAGATGATGAAAGTGCATAGGAGAATATATGATAACCGTGCAAGTATGAATTGTTCTGATGGAAGTAAAGGACCTCCATGCACAGGGTGGGTTGAGGGCATGGCACCTGTTTTTTCTCGGGCTGCTTGGAGATGTGTATGGCATTTGATTCAGAATGACCTGATCCATGGATGGGGCCTTGACATGAAGCTTGGTTATTGTGCTCAGGGTGATCGAGCTGAGAAGGTTGGCGTAATCGACAGTGAGTATGTTGTTCATCAAGGAATACCATCGTTAGGAGGACCATCACTAAGCAGTAAGACCCCTCGGAGATCTCTGGATTTACGGACCCACATTAGAAGACAATCGTCTGCTGAGCTGGAGAAGTTTAAAGAGCGCTGGAACAGAGCTGTAAGGGAAGATGAAGAATGGACAGATCCTTTTGATACTTGATTACTTTGAAAGAAGAATCCGATACAAATATACAAGCCCACCTGATACAAATATACAAGCCCACCTCACATTAGAGTTGCAGGACAGTCCACATCGATTACAATAATTGGACTCGAGATCATCTCACATGGCAATCTGTGGGCTTCATAGTAAACGGTTTGTTACAGACATTTATCTGACTAGCGTTCACCATTATGTCCTCAAGAGGTGAAGAGCCACTGGATACGGTACCATCAACACAAGGATCAAGGTGCAACTGAACGGCAACCCAAACTAACCAGAGACTTAACACAGTGTCTTGTAATTTAATTTAATTCCTCATTTCACTACGGGTGTATAGTGACATGATATACACACTTGTGCAGTTATCTTAATAGCA]
[+] EMBL AK064258 [GCCGCGCCGCACTCCTGTCTGTCTCTGCACTCTCGGACTCGTCTCCCATCCCTGGGGCGTGGGATCCCCTTCCGACCAAGGCAAGGCGAGGCGACCACCTGTCGCCGCCGCCGCCGCCGCCATGAAGCCTCCGCGGCGCCGCTATGGTTTACTCGCGGTGGTCGTCACTCTCATCGTCCTCGCCTCCCTCCAGATCCAGTTCCACCACCTCAAGGAGGACCGTCTCACCGGGGACCGCACCTTCGCCACCACCACCACCGACCCCGTTCACTGGCGGACCGGCGCCGAGGGCCTGCCACGCGGCATTGTTCACTCCAACTCCGACATGTACCTCCGCCCTCTCTGGGACTCTGGCGCCAACCCCAAGAATAAAAACGATAATCACAATGCTCTTTTGGCGATGGCAGTCGGCATTTCACAAATGCAGAATGTAGACATTATGGCCCGTAAGTTTCTTAACCAAAACTACACAGTCATGCTCTTCCATTATGACGGGAATGTAGATGGATGGCACAATCTTGAGTGGAGTGATAAGGCCATACACATACTTGCTCGTAACCAAACAAAGTGGTGGTTTGCTAAGCGCTTTCTACATCCTGATGTTGTGGCTATCTACGGTTTTATCTTTTTATGGGATGAAGACCTTGGAGTGGACAACTTTGACCCGAGAAGATATCTTGATATAATGGTTTCTGAAGGATTGGAAATTACACAACCTGCTCTGGACCCTGATCTATCGACTGATATTCACCATCGGATCACAATCCGCAACAAGATGATGAAAGTGCATAGGAGAATATATGATAACCGTGCAAGTATGAATTGTTCTGATGGAAGTAAAGGACCTCCATGCACAGGGTGGGTTGAGGGCATGGCACCTGTTTTTTCTCGGGCTGCTTGGAGATGTGTATGGCATTTGATTCAGAATGACCTGATCCATGGATGGGGCCTTGACATGAAGCTTGGTTATTGTGCTCAGGGTGATCGAGCTGAGAAGGTTGGCGTAATCGACAGTGAGTATGTTGTTCATCAAGGAATACCATCGTTAGGAGGACCATCACTAAGCAGTAAGACCCCTCGGAGATCTCTGGATTTACGGACCCACATTAGAAGACAATCGTCTGCTGAGCTGGAGAAGTTTAAAGAGCGCTGGAACAGAGCTGTAAGGGAAGATGAAGAATGGACAGATCCTTTTGATACTTGATTACTTTGAAAGAAGAATCCGATACAAATATACAAGCCCACCTGATACAAATATACAAGCCCACCTCACATTAGAGTTGCAGGACAGTCCACATCGATTACAATAATTGGACTCGAGATCATCTCACATGGCAATCTGTGGGCTTCATAGTAAACGGTTTGTTACAGACATTTATCTGACTAGCGTTCACCATTATGTCCTCAAGAGGTGAAGAGCCACTGGATACGGTACCATCAACACAAGGATCAAGGTGCAACTGAACGGCAACCCAAACTAACCAGAGACTTAACACAGTGTCTTGTAATTTAATTTAATTCCTCATTTCACTACGGGTGTATAGTGACATGATATACACACTTGTGCAGTTATCTTAAT ]
[+] EMBL AK073333 [ GGGGTCCCCTTCCGACCAAGGCAAGGCGAGGCGACCACCTGTCGCCGCCGCCGCCGCCGCCATGAAGCCTCCGCGGCGCCGCTATGGTTTACTCGCGGTGGTCGTCACTCTCATCGTCCTCGCCTCCCTCCAGATCCAGTTCCACCACCTCAAGGAGGACCGTCTCACCGGGGACCGCACCTTCGCCACCACCACCACCGACCCCGTTCACTGGCGGACCGGCGCCGAGGGCCTGCCACGCGGCATTGTTCACTCCAACTCCGACATGTACCTCCGCCCTCTCTGGGACTCTGGCGCCAACCCCAAGAATAAAAACGATAATCACAATGCTCTTTTGGCGATGGCAGTCGGCATTTCACAAATGCAGAATGTAGACATTATGGCCCGTAAGTTTCTTAACCAAAACTACACAGTCATGCTCTTCCATTATGACGGGAATGTAGATGGATGGCACAATCTTGAGTGGAGTGATAAGGCCATACACATACTTGCTCGTAACCAAACAAA GTGGTTTGCTAAGCGCTTTCTACATCCTGATGTTGTGGCTATCTACGGTTTTATCTTTTTATGGGATGAAGACCTTGGAGTGGACAACTTTGACCCGAGAAGATATCTTGATATAATGGTTTCTGAAGGATTGGAAATTACACAACCTGCTCTGGACCCTGATCTATCGACTGATATTCACCATCGGATCACAATCCGCAACAAGATGATGAAAGTGCATAGGAGAATATATGATAACCGTGCAAGTATGAATTGTTCTGATGGAAGTAAAGGACCTCCATGCACAGGGTGGGTTGAGGGCATGGCACCTGTTTTTTCTCGGGCTGCTTGGAGATGTGTATGGCATTTGATTCAGAATGACCTGATCCATGGATGGGGCCTTGACATGAAGCTTGGTTATTGTGCTCAGGGTGATCGAGCTGAGAAGGTTGGCGTAATCGACAGTGAGTATGTTGTTCATCAAGGAATACCATCGTTAGGAGGACCATCACTAAGCAGTAAGACCCCTCGGAGATCTCTGGATTTACGGACCCACATTAGAAGACAATCGTCTGCTGAGCTGGAGAAGTTTAAAGAGCGCTGGAACAGAGCTGTAAGGGAAGATGAAGAATGGACAGATCCTTTTGATACTTGATTACTTTGAAAGAAGAATCCGATACAAATATACAAGCCCACCTGATACAAATATACAAGCCCACCTCACATTAGAGTTGCAGGACAGTCCACATCGATTACAATAATTGGACTCGAGATCATCTCACATGGCAATCTGTGGGCTTCATAGTAAACGGTTTGTTACAGACATTTATCTGACTAGCGTTCACCATTATGTCCTCAAGAGGTGAAGAGCCACTGGATACGGTACCATCAACACAAGGATCAAGGTGCAACTGAACGGCAACCCAAACTAACCAGAGACTTAACACAGTGTCTTGTAATTTAATTTAATTCCTCATTTCACTACGGGTGTATAGTGACATGATATACACACTTGTGCAGTTATCTTAATAGCA]
[+] EMBL OSS3045A [ AGCTGAGAAGGTTGGCGTAATCGACAGTNAGTATGTTGTTCATCAAGGAATACCATCGTTAGGAGGACCATCACTAAGCAGTAAGACCCCTCGGAGATCTCTGGATTTACGGACCCACATTAGAAGACAATCGTCTGCTGAGCTGGAGAAGTTTAAAGAGCGCTGGAACAGAGCTGTAAGGGAAGATGAAGAATGGACAGATCCTTTTGATACTTGATTACTTTGAAAGAAGAATCCGATACAAATATACAAGCCCACCTGATACAAATATACAAGCCCACCTCACATTAGAGTTGCAGGACAGTCCACATCGATTACAATA ]
[+] EMBL CB000833 [ TAGGAGGACCATCACTAAGCA ACCCCTCGGAGATCTCTGGATTTACGGACCCACATTAGAAGACAATCGTCTGCTGAGCTGGAGAAGTTTAAAGAGCGCTGGAACAGAGCTGTAAGGGAAGATGAAGAATGGACAGATCCTTTTGATACTTGATTACTTTGAAAGAAGAATCCGATACAAATATACAAGCCCACCTGATACAAATATACAAGCCCACCTCACATTAGAGTTGCAGGACAGTCCACATCGATTACAATAATTGGACTCGAGATCATCTCACATGGCAATCTGTGGGCTTCATAGTAAACGGTTTGTTACAGACA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||