cluster # 6774

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Oryza sativa
cluster # 6774 cluster # 6774 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6774#0 length = 2027 sequences # 4
consensusID : consensus_6774#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2027
fasta sequence
                              [AGTGAACAAACCAGAGTTCAAAAATTTCCCAAAAAAAAATAAAAAATAAAAATCCGTCTCTTCCGCCTCCGACGATTCGCTGCTCGCCGGCCTCCGCCGCGGGCGCCGCGAAGCCTTCCGGTGAACTCCGGCGACGGGCGGGTGTGGGGATTCGCGGCCTTGAGGGTTCGTGCTCGCCTCCGACTCCTCGCTCGCTCTCTCTCTCTCTCCGCGGTTGCGGAGGTCGGGGGTCTTGCCGGCGGTGGGTGGGCTAGGGTTTCGCCGCCTCGGGTTCTCCGGGGTCCAGGAGATCTAGGGTTGTGAGATCAGGAGTAGGATTACAAAATTGCACACCAGATAGTTTTGCTGCTGAATATCAGAAAACCATGAAACCTCTTCAGCAGCGCTGTAAACCAACTGATACAGGAACGGCGGCAAAACTTGGTGGCAGTACGATGCAAAGCCTGAAACCTGGAAAATATATCAACAAATCATCAGGCAATGCTAGCACAAAATACAGAAGAGCTGGTGCCTCATCACCTCAATTGTATACTGAAAAACAAAGTGCACCAAAGGATGGTAGCTTTATGGAAGCACTGTTCCATGATTCTAAGAATGTGTCTGCTCGACCACCCTGCCATTCTGGAAAGATCGCACTTCAACTGTTCCCAATAGATGAGGAGTTTCAGAAGTCCCTGCAGCAGAAAAACCACAATCCTTACCTGGAATTGACTGTGGCTCCTCGAAAGAAAATATCCTCAGTTCTGCAGCATCTCAACACAAAATGGGGCAATTCTCAGTGTGCAAGAGGTGAACTCATGCTCTTCCCTGACGGTACTAGGCTTGATAACATAAATGGCAGTGAGAGATGGACTCGTAGTGATTCTTGCACAGCAGCTGATGTGCATGTTGCTGTTGGCAGCCCTTCGACATTTCGCTTAAGATATGGTTGGTTTCCACCCAATTTTGGGGAACAAAACAGTGGAGTATCTTTAGGATTAGTGCACTCTGCAGGCAATATAATCGACAACGAGCCTTTAGATCCTGTTGTCAGGGAACAGAAACAGATGACTGCTTTGAGTGAATTCCCGAGTAACTTTGCTGCACCGTCCACTGAGGCCAACACAGTAAAGACTATGAAACAGGATAATCAAAGCAAAGAGACACCACTTTCATGGATTGACTGCATATCTAATATAAGTTTTGGAGCACTATTAGCTGAAGCTGCGCCTTCTCAAGACAGCAAGCAGTTACTTCCACAAAACAACTCAAGTCTCCAACAGATACCTCTTACCGCTGATTCATTTGATGCTGCTATTGCTTCCCTGATTGCTCGGCAACAAGCAAGTAGCCAGCCGAAGGTGTCAACTCCATCCCTTTGGGATGCAGAAGAAACGTGCCATGCATTTCCTTCCCAGAATCGAATTTCACGCAGGACACCTGGTACAACTCCTAGCAGTTGTGGTGCTAGTACCTTGTCTGTCCTAGGCACAATTCTGGAATCTGGTACAGACGGTGAGAAGCAATGTTCTACTGAAGATAGAAGAGAGGAACCGAACCCTCAGGCATCACTCTTGGCCAATGATGACAATAATGTGAAGCCAGACATCCCAGTGTCTGAATCTACTGGGGAGCCAAGACTGGGAGCATCTTGTTTTCAGTCTGAATCGACTGGGGAGCCAGAAGTCGGAGCATCTTGTTCAAGACTTTTGAGTGGCACCGACAGTTTAAGTGTGAGCGATTTACTTGCAAACAGCTTGGATGCATTCCAGAAATTCTCTGTTTTCTGAAGCGTAGCTTTTATATGGAAGAACTGAAATTGCACATCTTGTAAAGATCAGGAACTAGGGTGAAACGTCGTATGTGTTTCCCAGTTCATTAGGAGATC--TTTTTTTTTTTGAGGGGGCTTGCTGATCTGAAGCCTCTTGTGTAGTATTTTTCCTTAAATATTTAGCGAAAAGCACCACCTTTGTCATGTAAACCTCTGCTAATTGCTACTAACAATAGCCATATTCATCTAAAATAATCAATGATAATATTGATTGTTA]

[+] EMBL AK070335             [AGTGAACAAACCAGAGTTCAAAAATTTCCCAAAAAAAAATAAAAAATAAAAATCCGTCTCTTCCGCCTCCGACGATTCGCTGCTCGCCGGCCTCCGCCGCGGGCGCCGCGAAGCCTTCCGGTGAACTCCGGCGACGGGCGGGTGTGGGGATTCGCGGCCTTGAGGGTTCGTGCTCGCCTCCGACTCCTCGCTCGCTCTCTCTCTCTCTCCGCGGTTGCGGAGGTCGGGGGTCTTGCCGGCGGTGGGTGGGCTAGGGTTTCGCCGCCTCGGGTTCTCCGGGGTCCAGGAGATCTAGGGTTGTGAGATCAGGAGTAGGATTACAAAATTGCACACCAGATAGTTTTGCTGCTGAATATCAGAAAACCATGAAACCTCTTCAGCAGCGCTGTAAACCAACTGATACAGGAACGGCGGCAAAACTTGGTGGCAGTACGATGCAAAGCCTGAAACCTGGAAAATATATCAACAAATCATCAGGCAATGCTAGCACAAAATACAGAAGAGCTGGTGCCTCATCACCTCAATTGTATACTGAAAAACAAAGTGCACCAAAGGATGGTAGCTTTATGGAAGCACTGTTCCATGATTCTAAGAATGTGTCTGCTCGACCACCCTGCCATTCTGGAAAGATCGCACTTCAACTGTTCCCAATAGATGAGGAGTTTCAGAAGTCCCTGCAGCAGAAAAACCACAATCCTTACCTGGAATTGACTGTGGCTCCTCGAAAGAAAATATCCTCAGTTCTGCAGCATCTCAACACAAAATGGGGCAATTCTCAGTGTGCAAGAGGTGAACTCATGCTCTTCCCTGACGGTACTAGGCTTGATAACATAAATGGCAGTGAGAGATGGACTCGTAGTGATTCTTGCACAGCAGCTGATGTGCATGTTGCTGTTGGCAGCCCTTCGACATTTCGCTTAAGATATGGTTGGTTTCCACCCAATTTTGGGGAACAAAACAGTGGAGTATCTTTAGGATTAGTGCACTCTGCAGGCAATATAATCGACAACGAGCCTTTAGATCCTGTTGTCAGGGAACAGAAACAGATGACTGCTTTGAGTGAATTCCCGAGTAACTTTGCTGCACCGTCCACTGAGGCCAACACAGTAAAGACTATGAAACAGGATAATCAAAGCAAAGAGACACCACTTTCATGGATTGACTGCATATCTAATATAAGTTTTGGAGCACTATTAGCTGAAGCTGCGCCTTCTCAAGACAGCAAGCAGTTACTTCCACAAAACAACTCAAGTCTCCAACAGATACCTCTTACCGCTGATTCATTTGATGCTGCTATTGCTTCCCTGATTGCTCGGCAACAAGCAAGTAGCCAGCCGAAGGTGTCAACTCCATCCCTTTGGGATGCAGAAGAAACGTGCCATGCATTTCCTTCCCAGAATCGAATTTCACGCAGGACACCTGGTACAACTCCTAGCAGTTGTGGTGCTAGTACCTTGTCTGTCCTAGGCACAATTCTGGAATCTGGTACAGACGGTGAGAAGCAATGTTCTACTGAAGATAGAAGAGAGGAACCGAACCCTCAGGCATCACTCTTGGCCAATGATGACAATAATGTGAAGCCAGACATCCCAGTGTCTGAATCTACTGGGGAGCCAAGACTGGGAGCATCTTGTTTTCAGTCTGAATCGACTGGGGAGCCAGAAGTCGGAGCATCTTGTTCAAGACTTTTGAGTGGCACCGACAGTTTAAGTGTGAGCGATTTACTTGCAAACAGCTTGGATGCATTCCAGAAATTCTCTGTTTTCTGAAGCGTAGCTTTTATATGGAAGAACTGAAATTGCACATCTTGTAAAGATCAGGAACTAGGGTGAAACGTCGTATGTGTTTCCCAGTTCATTAGGAGATC  TTTTTTTTTTTGAGGGGGCTTGCTGATCTGAAGCCTCTTGTGTAGTATTTTTCCTTAAATATTTAGCGAAAAGCACCACCTTTGTCATGTAAACCTCTGCTAATTGCTACTAACAATAGCCATATTCATCTAAAATAATCAATGATAAT           ]
[+] EMBL CB660784             [                 TCAAAAATTTCCCAAAAAAAAATAAAAAATAACAATCCGTCTCTTCCGCCTCCGACGATTCGCTGCTCGCCGGCCTCCGCCGCGGGCGCCGCGAAGCCTTCCGGTGAACTCCGGCGACGGGCGGGTGTGGGGATTCGCGGCCTTGAGGGTTCGTGCTCGCCTCCGACTCCTCGCTCGCTCTCTCTCTCTCTCCGCGGTTGCGGAGGTCGGGGGTCTTGCCGGCGGTGGGTGGGCTAGGGTTTCGCCGCCTCGGGTTCTCCGGGGTCCAGGAGATCTAGGGTTGTGAGATCAGGAGTAGGATTACAAAATTGCACACCAGATAGTTTTGCTGCTGAATATCAGAAAACCATGAAACCTCTTCAGCAGCGCTGTAAACCAACTGATACAGGAACGGCGGCAAAACTTGGTGGCAGTACGATGCAAAGCCTGAAACCTGGAAAATATATCAACAAATCATCAGGCAATGCTAGCACAAAATACAGAAGAGCTGGTGCCTCATCACCTCAATTGTATACTGAAAAACAAAGTGCACCAAAGGATGGTAGCTTTATGGAAGCACTGTTCCATGATTCTAAGAATGTGTCTGCTCGACCACCCTGCCATTCTGGAAAGATCGCACTTCAACTGTTCCCAATAGATGAGGAGTTTCAGAAGTCCCTGCAGCAGAAAAACCACAATCCTTACCTGGAATTGACTGTGGCTCCTCGAAAGAAAATATCCTCAGTTCTGCAGCATCTCAACACAAAATGGGGCAATTCTCAGTGTGCAAGAGGTGAACTCATGCTCTTCCCTGACGGTACTAGGCTTGATAACATAAATGGCAGTGAGAGATGGACTCGTAGTGATTCTTGCACAGCAGCTGATGTGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA763814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATCAGGCAATGCTAGCACAAAATACAGAAGAGCTGGTGCCTCATCGCCTCAATTGTATACTGAAAAACAAAGTGCACCAAAGGATGGTAGCTTTATGGAAGCACTGTTCCATGATTCTAAGAATGTGTCTGCTCGACCACCCCGCCATTCTGGAAAGATCGCACTTCAACTGTTCCCAATAGATGAGGAGTTTCAGAAGTCCCTGCAGCAGAAAAACCACAATCCTTACCTGGAATTGACTGTGGCTCCTCGAAAGAAAATATCCTCAGTTCTGCAGCATCTTAACACAAAATGGGGCAATTCTCAGTGTGCAAGAGGTGAACTCATGCTCTTCCCTGACGGTACTAGGCTTGATAACATAAATGGCAGTGAGAGATGGACTCGTAGTGATTCTTGCACAGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB660785             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTTACTTCCACAAAACAACTCAAGTCTCCAACAGATACCTCTTACCGCTGATTCATTTGATGCTGCTATTGCTTCCCTGATTGCTCGGCAACAAGCAAGTAGCCAGCCGAAGGTGTCAACTCCATCCCTTTGGGATGCAGAAGAAACGTGCCATGCATTTCCTTCCCAGAATCGAATTTCACGCAGGACACCTGGTACAACTCCTAGCAGTTGTGGTGCTAGTACCTTGTCTGTCCTAGGCACAATTCTGGAATCTGGTACAGACGGTGAGAAGCAATGTTCTACTGAAGATAGAAGAGAGGAACCGAACCCTCAGGCATCACTCTTGGCCAATGATGACAATAATGTGAAGCCAGACATCCCAGTGTCTGAATCTACTGGGGAGCCAAGACTGGGAGCATCTTGTTTTCAGTCTGAATCGACTGGGGAGCCAGAAGTCGGAGCATCTTGTTCAAGACTTTTGAGTGGCACCGACAGTTTAAGTGTGAGCGATTTACTTGCAAACAGCTTGGATGCATTCCAGAAATTCTCTGTTTTCTGAAGCGTAGCTTTTATATGGAAGAACTGAAATTGCACATCTTGTAAAGATCAGGAACTAGGGTGAAACGTCGTATGTGTTTCCCAGTTCATTAGGAGATCTTTTTTTTTTTTTGAGGGGGCTTGCTGATCTGAAGCCTCTTGTGTAGTATTTTTCCTTAAATATTTAGCGAAAAGCACCACCTTTGTCATGTAAACCTCTGCTAATGGCTACTAACAATAGCCATATTCATCTAAAATAATCAAGGATAATATTGATTGTTA]




>consensus_6774#0
AGTGAACAAACCAGAGTTCAAAAATTTCCCAAAAAAAAATAAAAAATAAAAATCCGTCTC
TTCCGCCTCCGACGATTCGCTGCTCGCCGGCCTCCGCCGCGGGCGCCGCGAAGCCTTCCG
GTGAACTCCGGCGACGGGCGGGTGTGGGGATTCGCGGCCTTGAGGGTTCGTGCTCGCCTC
CGACTCCTCGCTCGCTCTCTCTCTCTCTCCGCGGTTGCGGAGGTCGGGGGTCTTGCCGGC
GGTGGGTGGGCTAGGGTTTCGCCGCCTCGGGTTCTCCGGGGTCCAGGAGATCTAGGGTTG
TGAGATCAGGAGTAGGATTACAAAATTGCACACCAGATAGTTTTGCTGCTGAATATCAGA
AAACCATGAAACCTCTTCAGCAGCGCTGTAAACCAACTGATACAGGAACGGCGGCAAAAC
TTGGTGGCAGTACGATGCAAAGCCTGAAACCTGGAAAATATATCAACAAATCATCAGGCA
ATGCTAGCACAAAATACAGAAGAGCTGGTGCCTCATCACCTCAATTGTATACTGAAAAAC
AAAGTGCACCAAAGGATGGTAGCTTTATGGAAGCACTGTTCCATGATTCTAAGAATGTGT
CTGCTCGACCACCCTGCCATTCTGGAAAGATCGCACTTCAACTGTTCCCAATAGATGAGG
AGTTTCAGAAGTCCCTGCAGCAGAAAAACCACAATCCTTACCTGGAATTGACTGTGGCTC
CTCGAAAGAAAATATCCTCAGTTCTGCAGCATCTCAACACAAAATGGGGCAATTCTCAGT
GTGCAAGAGGTGAACTCATGCTCTTCCCTGACGGTACTAGGCTTGATAACATAAATGGCA
GTGAGAGATGGACTCGTAGTGATTCTTGCACAGCAGCTGATGTGCATGTTGCTGTTGGCA
GCCCTTCGACATTTCGCTTAAGATATGGTTGGTTTCCACCCAATTTTGGGGAACAAAACA
GTGGAGTATCTTTAGGATTAGTGCACTCTGCAGGCAATATAATCGACAACGAGCCTTTAG
ATCCTGTTGTCAGGGAACAGAAACAGATGACTGCTTTGAGTGAATTCCCGAGTAACTTTG
CTGCACCGTCCACTGAGGCCAACACAGTAAAGACTATGAAACAGGATAATCAAAGCAAAG
AGACACCACTTTCATGGATTGACTGCATATCTAATATAAGTTTTGGAGCACTATTAGCTG
AAGCTGCGCCTTCTCAAGACAGCAAGCAGTTACTTCCACAAAACAACTCAAGTCTCCAAC
AGATACCTCTTACCGCTGATTCATTTGATGCTGCTATTGCTTCCCTGATTGCTCGGCAAC
AAGCAAGTAGCCAGCCGAAGGTGTCAACTCCATCCCTTTGGGATGCAGAAGAAACGTGCC
ATGCATTTCCTTCCCAGAATCGAATTTCACGCAGGACACCTGGTACAACTCCTAGCAGTT
GTGGTGCTAGTACCTTGTCTGTCCTAGGCACAATTCTGGAATCTGGTACAGACGGTGAGA
AGCAATGTTCTACTGAAGATAGAAGAGAGGAACCGAACCCTCAGGCATCACTCTTGGCCA
ATGATGACAATAATGTGAAGCCAGACATCCCAGTGTCTGAATCTACTGGGGAGCCAAGAC
TGGGAGCATCTTGTTTTCAGTCTGAATCGACTGGGGAGCCAGAAGTCGGAGCATCTTGTT
CAAGACTTTTGAGTGGCACCGACAGTTTAAGTGTGAGCGATTTACTTGCAAACAGCTTGG
ATGCATTCCAGAAATTCTCTGTTTTCTGAAGCGTAGCTTTTATATGGAAGAACTGAAATT
GCACATCTTGTAAAGATCAGGAACTAGGGTGAAACGTCGTATGTGTTTCCCAGTTCATTA
GGAGATCTTTTTTTTTTTGAGGGGGCTTGCTGATCTGAAGCCTCTTGTGTAGTATTTTTC
CTTAAATATTTAGCGAAAAGCACCACCTTTGTCATGTAAACCTCTGCTAATTGCTACTAA
CAATAGCCATATTCATCTAAAATAATCAATGATAATATTGATTGTTA
clustalw multiple alignements is not computed in this case