These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6775#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1561 fasta sequence [AAAACCCTTGCTCCCACAGGAGTGAACACGACGCGACCCGAGCCGGAGAAGGGGAAGGGAAGGCGGCCGCCGCGCAGCCGCCGCCGCCGGTCACCGCCGCGACGCTCGTCTACCTCGAGAGCCCCACCGACACCCCGGGGCAGAAGCTCGTCGGCGCGCTCCTCGACGCCGCCGTCTTCGTCGCCCTCGTCGCCGTCGTCACCTTCGTCCTCGTCGCGCTCTACTACTACCGCTGCACGGGCTTCCTCAAGAACTACATGCGCTTCTCCGCCTTCTTCGTCCTCTTCTCCATGGGCGGCGCCATCGCCGCCGCCGTCCTCCGCCGCCTCGGCGCCCCGCTCGACGCCGCCACCGCGCTCGTGCTCCTCTTCAACGCCTCCGCCGTCGGCGTCCTCTCCGTCTTCGCCTCCGCGGTCCCCATCGTCGTGCGCCAGGGCTACATGGTCGCCCTCGCCGTCATCGTCGCCGCCTGGCTCTCCAGGCTGCCCGAGTGGACCACCTGGGTCATGCTCATCGCGCTCGCCCTGTATGACCTCGTCGCCGTGCTCGCGCCGCGGGGTCCTCTCAGGATGCTTGTGGAGCTCGCCTCATCCAGGGACGATGAGCTCCCTGCGCTCGTCTACGAGTCGAGACCGACGGTTGGGCCGGCCTCCGGTTCTTCCTCCTACGCTTCAGCCATGGGATCAGTTGAGATGCAGCCGGTGGCCGATCCCGGTCGATCGGGTGGAAATCAGTATGACAGAGTAGAGCAGGAGGATGATTCGAGCCGCGCCGTGGTGGAAATGAGGGATGTTGGTGGTAGCCGATCAAGCATTCGTGAGAGGAACCTCGAAAGGGAGGCGCCGATGGCGGTATCGGTATCAGGGCATTCATCGAATCAGGGTGGGAGTTCACAGCATGCTGTGATTCAGATTGAGCAGCACGAGGAAGGAGAGACAGTGCCATTGGTATCAGCGGCATCTGCCAACAATGCAGCCCCTAATGAGGAGCACAGAGAAAACTCTTCTTCAGACTCTGGTATGGAGTTCGAGATGTTCGAGTCCACCAGGGGCATCAAGCTGGGACTTGGTGATTTTATCTTCTACAGCGTGCTTGTGGGGAGGGCTGCGATGTATGATCTGATGACGGTGTATGCGTGCTACCTTGCCATCATTGCTGGGCTTGGCTGCACCCTTATCTTGCTGTCAATATGCAAGCATGCATTGCCTGCACTCCCGATCTCCATCTTGCTGGGTGTCACATTCTACTTCTTGACTCGGTTGCTGATGGAG-CCGTTCGTCGTTGGCTCTTCAACCAACTTGGTGATGTTCTGATTAATCTGCTATTGCCATTTTACATATGTGAAACAAGAAAGAGGAAATGATTGGCATTTTTTTTCAGTGACTGGTATTTTTGTTGGTCACTTCGTAGAGCAGTCATATGTATTTATCATTAGGAAATGTTGTTACAAGTTCAAGACCTTAGGCTCTTAAGGTAGTCTCAGGGATCGACTAGTTACATGCCTTGTTGTATGGTTCTATCAACATGACATGACATTTGAGAAGAAAAAAAAAAAAAAAAA] [+] EMBL AK106403 [AAAACCCTTGCTCCCACAGGAGTGAACACGACGCGACCCGAGCCGGAGAAGGGGAAGGGAAGGCGGCCGCCGCGCAGCCGCCGCCGCCGGTCACCGCCGCGACGCTCGTCTACCTCGAGAGCCCCACCGACACCCCGGGGCAGAAGCTCGTCGGCGCGCTCCTCGACGCCGCCGTCTTCGTCGCCCTCGTCGCCGTCGTCACCTTCGTCCTCGTCGCGCTCTACTACTACCGCTGCACGGGCTTCCTCAAGAACTACATGCGCTTCTCCGCCTTCTTCGTCCTCTTCTCCATGGGCGGCGCCATCGCCGCCGCCGTCCTCCGCCGCCTCGGCGCCCCGCTCGACGCCGCCACCGCGCTCGTGCTCCTCTTCAACGCCTCCGCCGTCGGCGTCCTCTCCGTCTTCGCCTCCGCGGTCCCCATCGTCGTGCGCCAGGGCTACATGGTCGCCCTCGCCGTCATCGTCGCCGCCTGGCTCTCCAGGCTGCCCGAGTGGACCACCTGGGTCATGCTCATCGCGCTCGCCCTGTATGACCTCGTCGCCGTGCTCGCGCCGCGGGGTCCTCTCAGGATGCTTGTGGAGCTCGCCTCATCCAGGGACGATGAGCTCCCTGCGCTCGTCTACGAGTCGAGACCGACGGTTGGGCCGGCCTCCGGTTCTTCCTCCTACGCTTCAGCCATGGGATCAGTTGAGATGCAGCCGGTGGCCGATCCCGGTCGATCGGGTGGAAATCAGTATGACAGAGTAGAGCAGGAGGATGATTCGAGCCGCGCCGTGGTGGAAATGAGGGATGTTGGTGGTAGCCGATCAAGCATTCGTGAGAGGAACCTCGAAAGGGAGGCGCCGATGGCGGTATCGGTATCAGGGCATTCATCGAATCAGGGTGGGAGTTCACAGCATGCTGTGATTCAGATTGAGCAGCACGAGGAAGGAGAGACAGTGCCATTGGTATCAGCGGCATCTGCCAACAATGCAGCCCCTAATGAGGAGCACAGAGAAAACTCTTCTTCAGACTCTGGTATGGAGTTCGAGATGTTCGAGTCCACCAGGGGCATCAAGCTGGGACTTGGTGATTTTATCTTCTACAGCGTGCTTGTGGGGAGGGCTGCGATGTATGATCTGATGACGGTGTATGCGTGCTACCTTGCCATCATTGCTGGGCTTGGCTGCACCCTTATCTTGCTGTCAATATGCAAGCATGCATTGCCTGCACTCCCGATCTCCATCTTGCTGGGTGTCACATTCTACTTCTTGACTCGGTTGCTGATGGAG CCGTTCGTCGTTGGCTCTTCAACCAACTTGGTGATGTTCTGATTAATCTGCTATTGCCATTTTACATATGTGAAACAAGAAAGAGGAAATGATTGGC ] [-] EMBL CB657087 [ ATGCAGCCGGTGGCCGATCCCGGTCGATCGGGTGGAAATCAGTATGACAGAGTAGAGCAGGAGGATGATTCGAGCCGCGCCGTGGTGGAAATGAGGGATGTTGGTGGTAGCCGATCAAGCATTCGTGAGAGGAACCTCGAAAGGGAGGCGCCGATGGCGGTATCGGTATCAGGGCATTCATCGAATCAGGGTGGGAGTTCACAGCATGCTGTGATTCAGATTGAGCAGCACGAGGAAGGAGAGACAGTGCCATTGGTATCAGCGGCATCTGCCAACAATGCAGCCCCTAATGAGGAGCACAGAGAAAACTCTTCTTCAGACTCTGGTATGGAGTTCGAGATGTTCGAGTCCACCAGGGGCATCAAGCTGGGACTTGGTGATTTTATCTTCTACAGCGTGCTTGTGGGGAGGGCTGCGATGTATGATCTGATGACGGTGTATGCGTGCTACCTTGCCATCATTGCTGGGCTTGGCTGCACCCTTATCTTGCTGTCAATATGCAAGCATGCATTGCCTGCACTCCCGATCTCCATCTTGCTGGGTGTCACATTCTACTTCTTGACTCGGTTGCTGATGGAG CCGTTCGTCGTTGGCTCTTCAACCAACTTGGTGATGTTTTGATTAATCTGCTATTGCCATTTTACATATGTGAAACAAGAAAGAGGAAATGATTGGCATTTTTTTTCAGTGACTGGTATTTTTGTTGGTCACTTCGTAGAGCAGTCATATGTATTTATCATTAGGAAATGTTGTTACAAGTTCAAGACCTTAGGCTCTTAAGGTAGTCTCAGGGATCGACTAGTTACATGCCTTGTTGTATGGTTCTATCAACATGACATGACATTTGAGAAG ] [+] EMBL CA766574 [ CGGCGGCCGNTCCCGGTCGATCGGGTGGAAATCAGTATGACAGAGTAGAGCAGGAGGATGATTCGAGCCGTGCCGCGGTGGAAACGAGGGATGTTGGTGGTAGCCGATCAAGCATTCGTGAGAGGAACCTCGAAAGGGAGGCGCCGATGGCGGTATCGGTATCAGGGCATTCATCGAATCAGGGTGGGAGTTCACAGCATGCTGTGATTCAGATTGAGCAGCACGAGGAAGGAGAGACAGNGCCATTGGTATCAGCGGCATCTGCCAACAATGCAGCCCCTAATGAGGAGCACAGAGAAAGCTCTTCTTCAGACTCTGGTATGGAGTTCGAGATGTTCGAGTCCACCAGGGGCATCAAGCTGGGACTTGGTGATTTTATCTTCTACAGCGTGCTTGTGGGGAGGGCTGCGATGTATGATCTGATGACGGTGTATGCGTGCTACCTTGCCATCATTGCTGGGCTTGGCTGCACCCTTATCTTGCTGTCAATATGCAAGCATGCATTGCCTGCACTCCCGATCTCCATCCTGCTGGGTGTCACATTCTACTTCTTGACTCGGTTGCTGATGGAGCCCGTTCGTCGTTGGCTCTTCAACCAACTTGGTGATGTTCTGATTAATCTGCTATTGCCATTTTACATATGTGAAACAAGAAAGAGGAAATGATTGGC ] [+] EMBL AU058092 [ GTTGGCTCTTCAACCAACTTGGTGATGTTCTGANTAANCTGCTATTGCCATTTTACATATGTGAAACNAGAAAGAGGAAATGANTGGCATTTTTTTTCAGTGACTGGTANTTTTGTTGGTCACTTCGTAGANCAGTCATATGTATTTANCATTAGGAAATGTTGTTACAAGTTCAANACCTTAGGCTCTTAAGGTANTCTCAGGGANCGACTAGTTACATGCCTTGTTGTATGGTTCTATCAACATGACATGACATTTGAGAAGAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||