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Oryza sativa
cluster # 6777 cluster # 6777       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6777#0 length = 808 sequences # 4  

consensusID : consensus_6777#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 808
fasta sequence
                              [GGACGAGACAAGGGGGGACTGGAGATGGCACTGGATGAGATCTCCCGTGATTTGGCTGCCTCTTCAGGAAGGATGCCAAGCAGTGAACCTGATATGAACTGCTGCATCCTTAGCCCGAAATTCTGGAGAAGACATGATGGCAGT-AGATACT-CATCCAAGTACTCCATCTCCG-ACATAGCAAACTACTCCGAGGAGAGCAGAACTTCTTACAAGTGGGAGAGGCAGAAGTTTGGAGTTCAGGGTGTTGTCACCAA-CCCATTAGCAGAGCCAAACGCTTCATTCGCAGGAAACACAGTTGTTGCTCAGGAAGCCAGGAGACAGAATTCAGCTCAATATAAGTCAAGGATGGGTTAGAGTTGACAAAGGCTGCTGCGTGAAGTTTTCGACGATATGAACAAAGCATGGTGCAGCTTCAAGATCCTACCTTTGCTGCATTTTCAAGCTCTTTTCTTCTTTTCTCCAAGTTGAAAAAAAACAGAGATGTACATGAGATATGAAGTTCTGTTTGAGTTCAGACTCGTGAGAAACAGCCTAAAGCCCTAGACTCTAAAGCAAGACCCTCTCTGTGAGCTTGGCATTCCATTTGTGTTATACACCAGGCCTTGAGATTGAGACAACCAGTTAGCTAATGCAGGCTTGCTGAGGGCAAAGCATATGTAGAGTTTAGAATGAGAAATCGAGTTCAGAGCAACTATCCTTGCAAGGATATTCAGCAATGGTTCCCATGAATGTATCTTGTTACTGCTTGTACATAATTTGGATATGGTAATTCCGATGCCGGTGAGACGACTTGAAACAAAAAAAAAAA]

[+] EMBL CA763921             [GGACGAGACAAGGGGGGACTGGAGATGGCACTGGATGAGATCTCCCGTGATTTGGCTGCCTCTTCAGGAAGGATGCCAAGCAGTGAACCTGATATGAACTGCTGCATCCTTAGCCCGAAATTCTGGAGAAGACATGATGGCAGT AGATACT CATCCAAGTACTCCATCTCCG ACATAGCAAACTACTCCGAGGAGAGCAGAACTTCTTACAAGTGGGAGAGGCAGAAGTTTGGAGTTCAGGGTGTTGTCACCAA CCCATTAGCAGAGCCAAACGCTTCATTCGCAGGAAACACAGTTGTTGCTCAGGAAGCCAGGAGACAGAATTCAGCTCAATATAAGTCAAGGATGGGTTAGAGTTGACAAAGGCTGCTGCGTGAAGTTTTCGACGATATGAACAAAGCATGGTGCAGCTTCAAGATCCTACCTTTGCTGCATTTTCAAGCTCTTTTCTTCTTTTCTCCAAGTTGAAAAAAAACAGAGATGTACATGAGATATGAAGTTCTGTTTGAGTTCAGACTCGTGAGAAACAGCCTAAAGCCCTAGACTCTAAAGCAAGACCCTCTCTGTGAGCTTGGCATTCCATTTGTGTTATACACCAGGCCTTGAGATTGAGACAACCAGNTAGCTAATGCAGGCTTGCTGAGGGCAAAGCATATGTAGAGNTTAGAATGAGAAATCGAGNTCAGAGCAACTATCCTTGC AGGATATT                                                                                                  ]
[-] EMBL CA761236             [                                                                                                                                        ATGGCAGT AGATACT CATCCAAGTACTCCATCTCCG ACATAGCAAACTACTNCGAGGAGAGCAGAACTTCTTACAAGTGGGAGAGGCAGAAGTTTGGAGTTCAGGGTGTTGTCACCAACCCCATTAGCAGAGCCAAACGCTTCATTCGCAGGAAACACAGTTGTTGCTCAGGAAGCCAGGAGACAGAATTCAGCTCAATATAAGTCAAGGATGGGTTAGAGTTGACAAAGGCTGCTGCGTGAAGTTTTCGACGATATGAACAAAGCATGGTGCAGCTTCAAGATCCTACCTTTGCTGCATTTTCAAGCTCTTTTCTTCTTTTCTCCAAGTTGAAAAAAAACAGAGATGTACATGAGATATGAAGTTCCGTTTGAGTTCAGACTCGTGAGAAACAGCCTAAAGCCCTAGACTCTAAAGCAAGACCCTCTCTGTGAGCTTGGCATTCCATTTGTGTTATACACCAGGCCTTGAGATTGAGACAACCAGTTAGCTAATGCAGGCTTGCTGAGGGCAAAGCATATGTAGAGTTTAGAATGAGAAATCGAGTTCAGAGCAACTATCCTTGCAAGGATATTCAGCAATGGTTCCCATGAATGTATCTTGTTACTGCTTGTACATAATTTGGATATGGTAATTCCGATGCCGGTGAGACGACTTGAAACAAAAAAAAAAA]
[+] EMBL AU101574             [                                                                                                                                            CAGTCAGATACTACATCCAAGTACTCCATCTCCGCACATAGCAAACTACTCCGAGGAGAGCAGAACTTCTTACAAGTGGGAGAGGCAGAAGTTTGGAGTTCAGGGTGTTGTCACCAA CCCATTAGCAGAGCCAAACGCTTCATTCGCAGGAAACACGGTTGTTGCTCAGGAAGCCAGGAGACAGAATTCAGCTCAATATAAGTCAAGGATGGGTTAGAGTCGACAAAGGCTACTGCGTGAAGTTTTCGACGATATGAACAAAGCATGGTGCAGCTGCAAGATCCTACCTTTGCTGCATTTTCAAGCTCTTTTCTTCTTTTCTCCAAGTTGAAAAAAAACAGAGATGTACATGAGATATGAAGTTCTGTTTGAGTTCAGACTCGTGAGAAACAGCCTAAAGCCCTAGACTCTAAAGCAAGACCCTCTCTGCGAGCTTGGCATTCCATTTGTGTTATACACCAGGCCTTGAGATTGAGACAACCAGTTAGCTAATGCAGGCTTGCTGAGGGCAAAGCATATGTAGAGTTTAAAATGAGAAATCGAGTTCACAGCAAa                                                                                                                    ]
[-] EMBL CB657270             [                                                                                                                                                                                                                                 CAGAAGTTTGGAGTTCAGGGTGTTGTCACCAA CCCATTAGCAGAGCCAAACGTTTCATTCGCAGGAAACACGGTTGTTGTTCAGGAAGCCAGGAGACAGAATTCAGCTCAATATAAGTCAAGGATGGGTTAGAGTTGACAAAGGTTAATGGGGGAAGTTTTCGACGATAGGAACAAAGCATGGTGCAGTTGCAAGATCCTACCTTTGGTGCATTTTCAAGCTCTTTTCTTCTTTTCTCCAAGTGGAAAAAAACCAGAGATGTACATGAGATATGAAGTTTTGTTTGAGTTCAGATTCGTGAGAAACAGCCTAAAGCCCTTGTTTATAAAGCAAGCCCCTCTCTGCGAGTTTGGCATTCCATTTGTGTTATACACCAGGCCTTGAGATTGAGACAACCAGTTAGCTAATGCAGGCTTGTTGAGGGCAAAGCATATGTAGAGTTTAAAAGGAGAAATCGAGTTCACAGCAACTATCCTTGCAAGGATATTCACCCATGGTTCCCATGAACGTATCTTGTTACTGCTTGTACATAATTTGAATATGGTAATTCAAAGGCCGGTGAGACG                    ]


>consensus_6777#0 GGACGAGACAAGGGGGGACTGGAGATGGCACTGGATGAGATCTCCCGTGATTTGGCTGCC TCTTCAGGAAGGATGCCAAGCAGTGAACCTGATATGAACTGCTGCATCCTTAGCCCGAAA TTCTGGAGAAGACATGATGGCAGTAGATACTCATCCAAGTACTCCATCTCCGACATAGCA AACTACTCCGAGGAGAGCAGAACTTCTTACAAGTGGGAGAGGCAGAAGTTTGGAGTTCAG GGTGTTGTCACCAACCCATTAGCAGAGCCAAACGCTTCATTCGCAGGAAACACAGTTGTT GCTCAGGAAGCCAGGAGACAGAATTCAGCTCAATATAAGTCAAGGATGGGTTAGAGTTGA CAAAGGCTGCTGCGTGAAGTTTTCGACGATATGAACAAAGCATGGTGCAGCTTCAAGATC CTACCTTTGCTGCATTTTCAAGCTCTTTTCTTCTTTTCTCCAAGTTGAAAAAAAACAGAG ATGTACATGAGATATGAAGTTCTGTTTGAGTTCAGACTCGTGAGAAACAGCCTAAAGCCC TAGACTCTAAAGCAAGACCCTCTCTGTGAGCTTGGCATTCCATTTGTGTTATACACCAGG CCTTGAGATTGAGACAACCAGTTAGCTAATGCAGGCTTGCTGAGGGCAAAGCATATGTAG AGTTTAGAATGAGAAATCGAGTTCAGAGCAACTATCCTTGCAAGGATATTCAGCAATGGT TCCCATGAATGTATCTTGTTACTGCTTGTACATAATTTGGATATGGTAATTCCGATGCCG GTGAGACGACTTGAAACAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)