Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6811 cluster # 6811       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6811#0 length = 1876 sequences # 2  
consensus_6811#1 length = 784 sequences # 1  
consensus_6811#2 length = 640 sequences # 1  

consensusID : consensus_6811#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1876
fasta sequence
                              [AAAATGGAGGCCACCAGTAGTACTACACTAGCGCTCTCCTCGCCGCCCACCGCCGCCGCCCGCCGCTCGCCGGCGAAGGCGATCGTCGCCTCCCACCACCTGCGCCACTCCTCCGTCCCCGCCCTTCACCTCCGCGCGGTCCCCGGCCCCTCCTTCCGCGCCCTCCCCTCACCCGGCTTCCCGGGATGGAGGAGGAAGAGGGGAAGCGGGCTGGTTGTGCGGGCAGAGATGTTTGGGCAGCTCACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAACTGACGAAGGACAACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCAGATGTGAGTTTGCCGGTAGTGAGAAGTTTTATTGAGTCCGTTACTGAAAAAGCTGTAGGCACTGATGTGATTCGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAACTTGTACAGTTGATGGGTGGGGAGGTATCAGATTTGGTGTTTGCAAAAACTGCCCCAACAGTTATCCTATTGGCGGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTGCCTATTATCTAAAGAAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCTGCTGCCATTGATCAACTCACTATTCTGGGGAAACAGGTTGGGGTTCCAGTTTACTCTGAAGGAACTGAAGCTAAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAGAAAACTGACGTAATCATAGTGGATACTGCTGGAAGGCTGCAGGTAGATAAAGCCATGATGAGTGAGTTGAAAGAGGTAAAAAGGGCAGTAAATCCTACAGAAGTTCTACTTGTGGTGGATGCCATGACTGGACAAGAAGCTGCATCATTGGTTAGCACCTTCAATGTTGAGATTGGTATTACTGGTGCTATACTGACAAAACTGGATGGTGATTCCAGAGGTGGAGCAGCACTAAGTATCAAAGAGGTATCTGGAAAGCCCATCAAGTTTGTAGGGCGAGGAGAACGCATGGAAGATCTTGAGCCTTTCTATCCTGATCGTATGGCACAACGAATCTTGGGAATGGGAGATGTACTTTCATTTGTTGAAAAGGCACAGGAAGTGATGCGTCAAGAAGATGCTGAGGAATTACAGAAGAAGATCCTGAGTGCAAAATTTAACTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCATTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGTGAAGCGGAGAAAAACCTTAAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAAAGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATGTTCATTGGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTATAGGAAGCGAGAATTTGGATGCTTTTGGGGAGCTACTGGTTTGCTGTGATCACCATGTAGTTTCTGTTGTAATTTTTTTCTTTTTTTGAAAAGACGTACTAGTATATCGGTATATGTTGTATTTTTGGCCATCAATTTAGCTCATAAG]

[+] EMBL AK058576             [AAAATGGAGGCCACCAGTAGTACTACACTAGCGCTCTCCTCGCCGCCCACCGCCGCCGCCCGCCGCTCGCCGGCGAAGGCGATCGTCGCCTCCCACCACCTGCGCCACTCCTCCGTCCCCGCCCTTCACCTCCGCGCGGTCCCCGGCCCCTCCTTCCGCGCCCTCCCCTCACCCGGCTTCCCGGGATGGAGGAGGAAGAGGGGAAGCGGGCTGGTTGTGCGGGCAGAGATGTTTGGGCAGCTCACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAACTGACGAAGGACAACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCAGATGTGAGTTTGCCGGTAGTGAGAAGTTTTATTGAGTCCGTTACTGAAAAAGCTGTAGGCACTGATGTGATTCGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAACTTGTACAGTTGATGGGTGGGGAGGTATCAGATTTGGTGTTTGCAAAAACTGCCCCAACAGTTATCCTATTGGCGGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTGCCTATTATCTAAAGAAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCTGCTGCCATTGATCAACTCACTATTCTGGGGAAACAGGTTGGGGTTCCAGTTTACTCTGAAGGAACTGAAGCTAAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAGAAAACTGACGTAATCATAGTGGATACTGCTGGAAGGCTGCAGGTAGATAAAGCCATGATGAGTGAGTTGAAAGAGGTAAAAAGGGCAGTAAATCCTACAGAAGTTCTACTTGTGGTGGATGCCATGACTGGACAAGAAGCTGCATCATTGGTTAGCACCTTCAATGTTGAGATTGGTATTACTGGTGCTATACTGACAAAACTGGATGGTGATTCCAGAGGTGGAGCAGCACTAAGTATCAAAGAGGTATCTGGAAAGCCCATCAAGTTTGTAGGGCGAGGAGAACGCATGGAAGATCTTGAGCCTTTCTATCCTGATCGTATGGCACAACGAATCTTGGGAATGGGAGATGTACTTTCATTTGTTGAAAAGGCACAGGAAGTGATGCGTCAAGAAGATGCTGAGGAATTACAGAAGAAGATCCTGAGTGCAAAATTTAACTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCATTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGTGAAGCGGAGAAAAACCTTAAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAAAGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATGTTCATTGGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTATAGGAAGCGAGAATTTGGATGCTTTTGGGGAGCTACTGGTTTGCTGTGATCACCATGTAGTTTCTGTTGTAATTTTTTTCTTTTTTTGAAAAGACGTACTAGTATATCGGTATATGTTGTATTTTTGGCCATCAATTTAGCTCATAAG]
[+] EMBL CB618745             [                    TACTACACTCGCGCTCTCCTCGCCGCCCACCGCCGCCGCCCGCCGCTCGCCGGCGAAGGCGATCGTCGCCTCCCACCACCTGCGCCACTCCTCCATCCCCGCTCTTCAGCTCCGCGCCGTCCCCGGCCCCTCCTTCCGCGCCCTCCCCTCACCTGGCTTCCCGGGATGGAGGAGGAAGAGGGGAAGCGGGCTGGTTGTGCGGGCAGAGATGTTTGGGCAGCTCACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAACTGACGAAGGACAACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCAGATGTGAGTTTGCCGGTAGTGAGAAGTTTTATTGAGTCTGTTACTGAAAAAGCTGTAGGCACTGATGTGATTCGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAACTTGTACAGTTGATGGGTGGGGAGGTATCAGATTTGGTATTTGCAAAAACTGGCCCAACAGTTATCCTATTGGCAGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTTCCTATTATCTAAAGAAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCTGCAGCCATTGATCAACTCACTATTCTGGGGAAACAGGTTGGGGTACCAGTTTACTCTGAAGGAACTGAAGCGAAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAGAAAACTGACGTAATCATAGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_6811#0 AAAATGGAGGCCACCAGTAGTACTACACTAGCGCTCTCCTCGCCGCCCACCGCCGCCGCC CGCCGCTCGCCGGCGAAGGCGATCGTCGCCTCCCACCACCTGCGCCACTCCTCCGTCCCC GCCCTTCACCTCCGCGCGGTCCCCGGCCCCTCCTTCCGCGCCCTCCCCTCACCCGGCTTC CCGGGATGGAGGAGGAAGAGGGGAAGCGGGCTGGTTGTGCGGGCAGAGATGTTTGGGCAG CTCACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAACTGACGAAG GACAACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCAGATGTGAGT TTGCCGGTAGTGAGAAGTTTTATTGAGTCCGTTACTGAAAAAGCTGTAGGCACTGATGTG ATTCGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAACTTGTACAG TTGATGGGTGGGGAGGTATCAGATTTGGTGTTTGCAAAAACTGCCCCAACAGTTATCCTA TTGGCGGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTGCCTATTATCTA AAGAAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCTGCTGCCATT GATCAACTCACTATTCTGGGGAAACAGGTTGGGGTTCCAGTTTACTCTGAAGGAACTGAA GCTAAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAGAAAACTGAC GTAATCATAGTGGATACTGCTGGAAGGCTGCAGGTAGATAAAGCCATGATGAGTGAGTTG AAAGAGGTAAAAAGGGCAGTAAATCCTACAGAAGTTCTACTTGTGGTGGATGCCATGACT GGACAAGAAGCTGCATCATTGGTTAGCACCTTCAATGTTGAGATTGGTATTACTGGTGCT ATACTGACAAAACTGGATGGTGATTCCAGAGGTGGAGCAGCACTAAGTATCAAAGAGGTA TCTGGAAAGCCCATCAAGTTTGTAGGGCGAGGAGAACGCATGGAAGATCTTGAGCCTTTC TATCCTGATCGTATGGCACAACGAATCTTGGGAATGGGAGATGTACTTTCATTTGTTGAA AAGGCACAGGAAGTGATGCGTCAAGAAGATGCTGAGGAATTACAGAAGAAGATCCTGAGT GCAAAATTTAACTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCA TTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGT GAAGCGGAGAAAAACCTTAAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAA AGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAA TCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCT CAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTC ATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAG TATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATG TTCATTGGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTATAGGAAGCGAGA ATTTGGATGCTTTTGGGGAGCTACTGGTTTGCTGTGATCACCATGTAGTTTCTGTTGTAA TTTTTTTCTTTTTTTGAAAAGACGTACTAGTATATCGGTATATGTTGTATTTTTGGCCAT CAATTTAGCTCATAAG



consensusID : consensus_6811#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 784
fasta sequence
                              [CTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCATTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGTGAAGCGGAGAAAAACCTTGAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAAAGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAATGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATGTTCATTGGCTCTTCTGAACCAAATTGTTTTGATGCCAGTTACATGTATGTTAGTGTAAGAACTTGCCTTGGATTCAGACATTCAGTCATACAGACATAGGAAGTGAGAATCTGGATGCTTTTGGGGAGCTACTGGTTTGCTGGGATCACCATGTAGTATCTGTTGTAATTTTTTTTCTTTTTCTTTTTGAAAAGACGTATATGTTGTATTTTTGGCCATCAATTTAGCTTGTAAGTTGTATTCTTGGCCCATCTGTTGTGATCTCTAGCTGCAACTCGCAAATGGTGGCAAAGTGGAAATACAAACGGCTCTGCA]

[-] EMBL CB618746             [CTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCATTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGTGAAGCGGAGAAAAACCTTGAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAAAGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAATGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATGTTCATTGGCTCTTCTGAACCAAATTGTTTTGATGCCAGTTACATGTATGTTAGTGTAAGAACTTGCCTTGGATTCAGACATTCAGTCATACAGACATAGGAAGTGAGAATCTGGATGCTTTTGGGGAGCTACTGGTTTGCTGGGATCACCATGTAGTATCTGTTGTAATTTTTTTTCTTTTTCTTTTTGAAAAGACGTATATGTTGTATTTTTGGCCATCAATTTAGCTTGTAAGTTGTATTCTTGGCCCATCTGTTGTGATCTCTAGCTGCAACTCGCAAATGGTGGCAAAGTGGAAATACAAACGGCTCTGCA]


>consensus_6811#1 CTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCATTTAGTCGTAT AATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGTGAAGCGGAGAA AAACCTTGAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAAAGGGAAAGACC AGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAA TGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAA AATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCAT CAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCT GAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATGTTCATTGGCTC TTCTGAACCAAATTGTTTTGATGCCAGTTACATGTATGTTAGTGTAAGAACTTGCCTTGG ATTCAGACATTCAGTCATACAGACATAGGAAGTGAGAATCTGGATGCTTTTGGGGAGCTA CTGGTTTGCTGGGATCACCATGTAGTATCTGTTGTAATTTTTTTTCTTTTTCTTTTTGAA AAGACGTATATGTTGTATTTTTGGCCATCAATTTAGCTTGTAAGTTGTATTCTTGGCCCA TCTGTTGTGATCTCTAGCTGCAACTCGCAAATGGTGGCAAAGTGGAAATACAAACGGCTC TGCA



consensusID : consensus_6811#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 640
fasta sequence
                              [AAAGACCGAGCTACTTGCTGAATNCGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATGTTCATTGGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTATGTTAGTGTAAGAACTTGCCTTGGATTCAGACATTCAGATGTAGGAAGCGAGAATTTGGATGCTTTTGGGGAGCTACCTGGTCTTGCTGTGATCACCATGTAGNTTTCTGTTGTAATTTTTTTCTTTTTTTGAAAAGACGTACTAGTATTATCGGTATATGTTGTATTTTTTGGCCATCAATTTAGCTCATAAGTTGTGTTCCTTGCCCATTTTTTGTGATCTCTAGCTGAAACTCGCAAATGGTGGCAAAGTGGAACATACAAACTGCTCTCCATTTCAATGTATAATAATAAATTT]

[+] EMBL CB096595             [AAAGACCGAGCTACTTGCTGAATNCGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATGTTCATTGGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTATGTTAGTGTAAGAACTTGCCTTGGATTCAGACATTCAGATGTAGGAAGCGAGAATTTGGATGCTTTTGGGGAGCTACCTGGTCTTGCTGTGATCACCATGTAGNTTTCTGTTGTAATTTTTTTCTTTTTTTGAAAAGACGTACTAGTATTATCGGTATATGTTGTATTTTTTGGCCATCAATTTAGCTCATAAGTTGTGTTCCTTGCCCATTTTTTGTGATCTCTAGCTGAAACTCGCAAATGGTGGCAAAGTGGAACATACAAACTGCTCTCCATTTCAATGTATAATAATAAATTT]


>consensus_6811#2 AAAGACCGAGCTACTTGCTGAATNCGCGAGAGGAGGATAAGAGTGGCCAAGGAATCCGGA AAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAAATG CAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATGGAT TCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTATGGC AATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATGTTCATT GGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTATGTTAGTGTAAGAACTTG CCTTGGATTCAGACATTCAGATGTAGGAAGCGAGAATTTGGATGCTTTTGGGGAGCTACC TGGTCTTGCTGTGATCACCATGTAGNTTTCTGTTGTAATTTTTTTCTTTTTTTGAAAAGA CGTACTAGTATTATCGGTATATGTTGTATTTTTTGGCCATCAATTTAGCTCATAAGTTGT GTTCCTTGCCCATTTTTTGTGATCTCTAGCTGAAACTCGCAAATGGTGGCAAAGTGGAAC ATACAAACTGCTCTCCATTTCAATGTATAATAATAAATTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      AAAATGGAGGCCACCAGTAGTACTACACTAGCGCTCTCCTCGCCGCCCACCGCCGCCGCC 60
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      CGCCGCTCGCCGGCGAAGGCGATCGTCGCCTCCCACCACCTGCGCCACTCCTCCGTCCCC 120
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      GCCCTTCACCTCCGCGCGGTCCCCGGCCCCTCCTTCCGCGCCCTCCCCTCACCCGGCTTC 180
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      CCGGGATGGAGGAGGAAGAGGGGAAGCGGGCTGGTTGTGCGGGCAGAGATGTTTGGGCAG 240
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      CTCACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAACTGACGAAG 300
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      GACAACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCAGATGTGAGT 360
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      TTGCCGGTAGTGAGAAGTTTTATTGAGTCCGTTACTGAAAAAGCTGTAGGCACTGATGTG 420
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      ATTCGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAACTTGTACAG 480
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      TTGATGGGTGGGGAGGTATCAGATTTGGTGTTTGCAAAAACTGCCCCAACAGTTATCCTA 540
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      TTGGCGGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTGCCTATTATCTA 600
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      AAGAAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCTGCTGCCATT 660
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      GATCAACTCACTATTCTGGGGAAACAGGTTGGGGTTCCAGTTTACTCTGAAGGAACTGAA 720
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      GCTAAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAGAAAACTGAC 780
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      GTAATCATAGTGGATACTGCTGGAAGGCTGCAGGTAGATAAAGCCATGATGAGTGAGTTG 840
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      AAAGAGGTAAAAAGGGCAGTAAATCCTACAGAAGTTCTACTTGTGGTGGATGCCATGACT 900
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      GGACAAGAAGCTGCATCATTGGTTAGCACCTTCAATGTTGAGATTGGTATTACTGGTGCT 960
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      ATACTGACAAAACTGGATGGTGATTCCAGAGGTGGAGCAGCACTAAGTATCAAAGAGGTA 1020
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      TCTGGAAAGCCCATCAAGTTTGTAGGGCGAGGAGAACGCATGGAAGATCTTGAGCCTTTC 1080
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      TATCCTGATCGTATGGCACAACGAATCTTGGGAATGGGAGATGTACTTTCATTTGTTGAA 1140
                                                                                  

consensus_6811#1      ------------------------------------------------------------
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      AAGGCACAGGAAGTGATGCGTCAAGAAGATGCTGAGGAATTACAGAAGAAGATCCTGAGT 1200
                                                                                  

consensus_6811#1      -----------CTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCA 49
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      GCAAAATTTAACTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCA 1260
                                                                                  

consensus_6811#1      TTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGT 109
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      TTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGT 1320
                                                                                  

consensus_6811#1      GAAGCGGAGAAAAACCTTGAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAA 169
consensus_6811#2      ------------------------------------------------------------
consensus_6811#0      GAAGCGGAGAAAAACCTTAAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAA 1380
                                                                                  

consensus_6811#1      AGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAA 229
consensus_6811#2      ----AAAGACC-GAGCTACTTGCTGAATN-CGCGAGAGGAGGATAAGAGTGGCCAAGGAA 54
consensus_6811#0      AGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAA 1440
                          ******* ****************  ******************************

consensus_6811#1      TCCGGAAAAAATGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCT 289
consensus_6811#2      TCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCT 114
consensus_6811#0      TCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCT 1500
                      *********** ************************************************

consensus_6811#1      CAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTC 349
consensus_6811#2      CAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTC 174
consensus_6811#0      CAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTC 1560
                      ************************************************************

consensus_6811#1      ATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAG 409
consensus_6811#2      ATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAG 234
consensus_6811#0      ATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAG 1620
                      ************************************************************

consensus_6811#1      TATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATG 469
consensus_6811#2      TATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATG 294
consensus_6811#0      TATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGAATG 1680
                      ************************************************************

consensus_6811#1      TTCATTGGCTCTT-CTGAACCAAATTGTTTTGATGCCAGTTACATGTATGTTAGTGTAAG 528
consensus_6811#2      TTCATTGGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTATGTTAGTGTAAG 354
consensus_6811#0      TTCATTGGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTAT----------- 1729
                      ************* ********** ************************           

consensus_6811#1      AACTTGCCTTGGATTCAGACATTCAGTCATACAGACATAGGAAGTGAGAATCTGGATGCT 588
consensus_6811#2      AACTTGCCTTGGATTCAGACATTCAG--------ATGTAGGAAGCGAGAATTTGGATGCT 406
consensus_6811#0      --------------------------------------AGGAAGCGAGAATTTGGATGCT 1751
                                                            ****** ****** ********

consensus_6811#1      TTTGGGGAGCTAC-TGGT-TTGCTGGGATCACCATGTAGTAT-CTGTTGTAATTTTTTTT 645
consensus_6811#2      TTTGGGGAGCTACCTGGTCTTGCTGTGATCACCATGTAGNTTTCTGTTGTAATTTTTTTC 466
consensus_6811#0      TTTGGGGAGCTAC-TGGT-TTGCTGTGATCACCATGTAGTTT-CTGTTGTAATTTTTTTC 1808
                      ************* **** ****** *************  * **************** 

consensus_6811#1      CTTTTT--------CTTTTTGAAAAGAC--GTATATGTTGTATTTTT-GGCCATCAATTT 694
consensus_6811#2      TTTTTTTGAAAAGACGTACTAGTATTATCGGTATATGTTGTATTTTTTGGCCATCAATTT 526
consensus_6811#0      TTTTTTTGAAAAGACGTACTAGTAT-ATCGGTATATGTTGTATTTTT-GGCCATCAATTT 1866
                       *****        * *  *   *  *   ***************** ************

consensus_6811#1      AGCTTGTAAGTTGTATTCTTGGCCCATCTGTTGTGATCTCTAGCTGCAACTCGCAAATGG 754
consensus_6811#2      AGCTCATAAGTTGTGTTCCTTGCCCATTTTTTGTGATCTCTAGCTGAAACTCGCAAATGG 586
consensus_6811#0      AGCTCATAAG-------------------------------------------------- 1876
                      ****  ****                                                  

consensus_6811#1      TGGCAAAGTGGAA-ATACAAACGGCTCTGCA----------------------- 784
consensus_6811#2      TGGCAAAGTGGAACATACAAACTGCTCTCCATTTCAATGTATAATAATAAATTT 640
consensus_6811#0      ------------------------------------------------------
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)