These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6828#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3441 fasta sequence [CCTAGCGACCGGTAGCGGGGGAGAGGAGCTGGGCACGGCGGGTGAGGATGGGCGACCGCCCGACGGAGAGGAGCTAGACACGGAAGGCCGATGCGGCGGGCGTGGGCGGCGGTCGGCGGGAGAGGAGCTGGGTGGTGGTGCTCAGGCGAGGGCGGTGGCGTCACTGAGCTCGACCGGCCGTCCCCATCTTCTCGACGGCGACGCATGGAGAGAAGGGCCGGCAGGCTGGTGCGCGGCTGTGGGCGACGTTGTCACCGAGCTCAACCGGTCGCACGACAGAGAGAAGCTGGGCGTGGAAGACCGGTGCGGCGGGCACGGGCGGCGGCCGGCTGGGGAGGAGCTGGGTGGTGGCGCTCAGGCACGAGCGGCGATGTCACCAAGCTCGACCGGCCGTCCCCATCTTCTCGATGATGGGGCATGGGGAGAAGGGCCGGCAGGCCGGTGCGCGCGGCGTCGTCACCGAGCTCGACCAGCCATCCCCATTTTCTCACCAAGGAACACGCAAGAGGGGCGGTCATTGTCGCCGGTGAGCTCGCGGGAGCTTGGGGAGTCTGGCGATGGTGGCTTGCCTCGACCTCCCGACGAGCTAGGCACCATCGCGGCGCCACGATCCGCGGCTCTTTCGCCTGGTTGGAGTCGAAGCTGGAGCGGGCGCGACCGCTGGAGGGGACCGCTCCACATCGGTGTCGGTGTCCAGCGGCCATGGTGATGATGGCGGCGGGCGTCCGTCAGCGCCCGCACAGGAGGAGCTGGCGGCTCTGGTGGCAGAGAGTGCGAGGAACCACCGCCCGTGTGTCGCTCCTCCCTGCCCGCCCTGCGCAGCTCCTCCCACCGCCGCCTGTGCCCGCCTCCCGCGCCCAGCTAGCCAGCCGCTCCCTCGCTGTCCGCCGCCTGTGCTTGCTGCCCGCGCCCAAGCTAGCCAGCTGCTCCCCTGCCGTCCGCCGCCCACACCTAGCTGCTCCCCCCCTCCCCCGCCGCCCGTGTATAGGAGAGGAGAGGAGAGATGAAGAGAGGAAAGAGGAAGAAGAGGCTGACGGGTGGGGCTCACATGGGTCCCACTCTAAGTCAGCTGCTACATTGGACAAAACAGAGTCAAAATCACCGAGGGATCAGTTTGCACTGATTTTATAAGTTGGAGGATGCGTTGTATCCGGTTTGGTTTTGTGGTTCAAGGACGATTTTATATCTCGATGACAAGTTGAGGGACCTTCAGCGTACTTTTTCCACTGCAAAATGGAAGCCCGTGTATGGAACACGGTCCGGCCCAGCCCAGCACGGTCCACTACCTTGTCGCCGCGCGGGGCACCGGTCAGATCAGTTTGACTCCGTTTCCGTCCCCACCAAACTGAGACAGACTCGGAGCCCCTCCCCCCTTCTAGCTAACCGGCGCCACGTCACGCCAGTACTCCACCGCGCCTCGGCCTCGGCCTCGCTCTCGTCGCCTCCCCCGCTCCGCCCAAAACGGAACCGAACCAAACCAAAACCCTACGAAGAGGGGGAGAGCAGAGCAGCAGCGGCGGCGGCGGCGAAGGCGGAGAGAGCGCGCTCGGCGCACGGCATGGGTGTCTCCGCCGACGGCCTCGTGCTCAAGGCGGCGTGCGAGCGCTGCGGCTCGTCGTCGGACCTCCACGGCACGGGGTGCCGCCACGCCACCCTCTGCGTCTCCTGCGGCAGCGCCATGGCTCGCTGCCGGCGATTGCTGCCCCGTCTGCGCCGCCCCCATCGCCAGCCTCATCCGGGAGTACAATGTCCTGGTGGATACCACCGGAGAGAAGCAATATACGATCGGCAAATTCACCACCGGTGTGCCGCCCTTCTCCGATAGGGAGAATGCGGGGAGCCGCAGCTGGTCTCTTCATCCCGAGGGACAGCAAGGACGGCAACCTACCGGCAATATATGGGAGAATTGCAGCAACAGAAAGTCATGTATTTTGGAAGATGATACAGGTGACTATCAGTACCAAGGTCAAATTCAGGGCTTACAATCTGCAGCCTCGACATATTATTTGTTGATGATGCATGGCAAGGATGTACACGCTGTTCCCGCTGATTCCTGGTATAACTTCAGTAAAATTTCACAGTACAAACAGCTGACTTTGGAAGAAGCTGAAGAGAAGATGAGCAGGAGGAGAAGCACAGCAACTGGGTATGGACGGTGGATGATGAAGGCGGCTACAAATGGAGCTGCTGCTTTTAGTTCAGATGTGACGCAGCTCGATGATGCTAATGAAGGAGAAACAGATCAGGTTCACCTGAAGAAAGGCAACAAGAATGGGGATGAAAATAAATCTGATAAAGGCAGTGGGGAAGAAAGAGCGCATGTGCCTATGACAAAGGGTAGGGAGGAGGAAGGTAGTAAAGACAGAGACTTTGATTTGGATGATGAAATTGAAAAGGGTGATGATTGGGAACATGAAGAGATCTTTACTGATGATGATGAAGCTGTGGACGTTGACCCAGAGGAAGGAGGTGATTTAGCTGATCCTGAAATCCCTGCTCCACCAGAAATTAAGCAGGATGATAATGAGAAACATGGAGGGGTAGGCCTGAGCAAATCTGGTAAGGAACTAAAGAAGTTGCTCCGCCGTGCCGCGGGACAAAACGAGTCTGATGATGACGATGAAGACACGGATGAAGATGAGTCACCATCGCCAGTACTTGCTCCGAAACAGCAGGATCAACTCAAAATTGAACCACAGGAAGACAACCATTCTAAACCAACAGTTCTCGGACATCCTTATAGCACTCCACATGTTTCCAAATCCAATCAAAAGAGGAGACAAAGGGGTGATGATTCAAAAACTTGTGCTACCCCTAAAAAGCCGAAGATAGAGCCTGATACCAAGAAGATAGTCGTGAAGGAGGAGACCTCGTGTTCCTTGGAACCAACTTCAGAACCATTTGCCTCAGCGAGAAGTGATACAAATGTATCTCCTATTACAGTGGAGGAAATCAGGGTGGTACTTCGTTTATATGCACCTATCGCAATGCGAGATTTTTCAAAAGATTTTATGCCCAGATTTTCGCCTCGACTAAGAAGTCCAGAGGACAGGGAAGTTTTTCTCGCCAATCTGAGGAAAATCTCACACCTGCAGAAGATCAATGGCCAGAAGTACATCATCCTTCTAGAGGAATATAAATAAAATGACAAAACCTGCAGAGTTGTGTATGCTGTTATGCTCCCCTTGGCTCGAGCTTAGCATGCCTGCCCTTCTATCCTGAAAA-TTAGTAGATGCTTGCAGTTGCAGAACGTGACAGGCTTAACACATATTCTTGATTGACCTCATATTTTTCATACTAGTATACCCCCTTGTAAGTTGTAACAACAAATGATAGTTTGTCATACTATTAGCAAATGATAGTTTGTCATACTATTGTTTTGTCGTGCTGAATAGCTCTGATGGGCAATAATCTGCTTGATCAGGTTTAATGTTAAAAAAA] [+] EMBL AK067333 [CCTAGCGACCGGTAGCGGGGGAGAGGAGCTGGGCACGGCGGGTGAGGATGGGCGACCGCCCGACGGAGAGGAGCTAGACACGGAAGGCCGATGCGGCGGGCGTGGGCGGCGGTCGGCGGGAGAGGAGCTGGGTGGTGGTGCTCAGGCGAGGGCGGTGGCGTCACTGAGCTCGACCGGCCGTCCCCATCTTCTCGACGGCGACGCATGGAGAGAAGGGCCGGCAGGCTGGTGCGCGGCTGTGGGCGACGTTGTCACCGAGCTCAACCGGTCGCACGACAGAGAGAAGCTGGGCGTGGAAGACCGGTGCGGCGGGCACGGGCGGCGGCCGGCTGGGGAGGAGCTGGGTGGTGGCGCTCAGGCACGAGCGGCGATGTCACCAAGCTCGACCGGCCGTCCCCATCTTCTCGATGATGGGGCATGGGGAGAAGGGCCGGCAGGCCGGTGCGCGCGGCGTCGTCACCGAGCTCGACCAGCCATCCCCATTTTCTCACCAAGGAACACGCAAGAGGGGCGGTCATTGTCGCCGGTGAGCTCGCGGGAGCTTGGGGAGTCTGGCGATGGTGGCTTGCCTCGACCTCCCGACGAGCTAGGCACCATCGCGGCGCCACGATCCGCGGCTCTTTCGCCTGGTTGGAGTCGAAGCTGGAGCGGGCGCGACCGCTGGAGGGGACCGCTCCACATCGGTGTCGGTGTCCAGCGGCCATGGTGATGATGGCGGCGGGCGTCCGTCAGCGCCCGCACAGGAGGAGCTGGCGGCTCTGGTGGCAGAGAGTGCGAGGAACCACCGCCCGTGTGTCGCTCCTCCCTGCCCGCCCTGCGCAGCTCCTCCCACCGCCGCCTGTGCCCGCCTCCCGCGCCCAGCTAGCCAGCCGCTCCCTCGCTGTCCGCCGCCTGTGCTTGCTGCCCGCGCCCAAGCTAGCCAGCTGCTCCCCTGCCGTCCGCCGCCCACACCTAGCTGCTCCCCCCCTCCCCCGCCGCCCGTGTATAGGAGAGGAGAGGAGAGATGAAGAGAGGAAAGAGGAAGAAGAGGCTGACGGGTGGGGCTCACATGGGTCCCACTCTAAGTCAGCTGCTACATTGGACAAAACAGAGTCAAAATCACCGAGGGATCAGTTTGCACTGATTTTATAAGTTGGAGGATGCGTTGTATCCGGTTTGGTTTTGTGGTTCAAGGACGATTTTATATCTCGATGACAAGTTGAGGGACCTTCAGCGTACTTTTTCCACTGCAAAATGGAAGCCCGTGTATGGAACACGGTCCGGCCCAGCCCAGCACGGTCCACTACCTTGTCGCCGCGCGGGGCACCGGTCAGATCAGTTTGACTCCGTTTCCGTCCCCACCAAACTGAGACAGACTCGGAGCCCCTCCCCCCTTCTAGCTAACCGGCGCCACGTCACGCCAGTACTCCACCGCGCCTCGGCCTCGGCCTCGCTCTCGTCGCCTCCCCCGCTCCGCCCAAAACGGAACCGAACCAAACCAAAACCCTACGAAGAGGGGGAGAGCAGAGCAGCAGCGGCGGCGGCGGCGAAGGCGGAGAGAGCGCGCTCGGCGCACGGCATGGGTGTCTCCGCCGACGGCCTCGTGCTCAAGGCGGCGTGCGAGCGCTGCGGCTCGTCGTCGGACCTCCACGGCACGGGGTGCCGCCACGCCACCCTCTGCGTCTCCTGCGGCAGCGCCATGGCTCGCTGCCGGCGATTGCTGCCCCGTCTGCGCCGCCCCCATCGCCAGCCTCATCCGGGAGTACAATGTCCTGGTGGATACCACCGGAGAGAAGCAATATACGATCGGCAAATTCACCACCGGTGTGCCGCCCTTCTCCGATAGGGAGAATGCGGGGAGCCGCAGCTGGTCTCTTCATCCCGAGGGACAGCAAGGACGGCAACCTACCGGCAATATATGGGAGAATTGCAGCAACAGAAAGTCATGTATTTTGGAAGATGATACAGGTGACTATCAGTACCAAGGTCAAATTCAGGGCTTACAATCTGCAGCCTCGACATATTATTTGTTGATGATGCATGGCAAGGATGTACACGCTGTTCCCGCTGATTCCTGGTATAACTTCAGTAAAATTTCACAGTACAAACAGCTGACTTTGGAAGAAGCTGAAGAGAAGATGAGCAGGAGGAGAAGCACAGCAACTGGGTATGGACGGTGGATGATGAAGGCGGCTACAAATGGAGCTGCTGCTTTTAGTTCAGATGTGACGCAGCTCGATGATGCTAATGAAGGAGAAACAGATCAGGTTCACCTGAAGAAAGGCAACAAGAATGGGGATGAAAATAGATCTGATAAAGGCAGTGGGGAAGAAAGAGCGCATGTGCCTATGACAAAGGGTAGGGAGGAGGAAGGTAGTAAAGACAGAGACTTTGATTTGGATGATGAAATTGAAAAGGGTGATGATTGGGAACATGAAGAGATCTTTACTGATGATGATGAAGCTGTGGACGTTGACCCAGAGGAAGGAGGTGATTTAGCTGATCCTGAAATCCCTGCTCCACCAGAAATTAAGCAGGATGATAATGAGAAACATGGAGGGGTAGGCCTGAGCAAATCTGGTAAGGAACTAAAGAAGTTGCTCCGCCGTGCCGCGGGACAAAACGAGTCTGATGATGACGATGAAGACACGGATGAAGATGAGTCACCATCGCCAGTACTTGCTCCGAAACAGCAGGATCAACTCAAAATTGAACCACAGGAAGACAACCATTCTAAACCAACAGTTCTCGGACATCCTTATAGCACTCCACATGTTTCCAAATCCAATCAAAAGAGGAGACAAAGGGGTGATGATTCAAAAACTTGTGCTACCCCTAAAAAGCCGAAGATAGAGCCTGATACCAAGAAGATAGTCGTGAAGGAGGAGACCTCGTGTTCCTTGGAACCAACTTCAGAACCATTTGCCTCAGCGAGAAGTGATACAAATGTATCTCCTATTACAGTGGAGGAAATCAGGGTGGTACTTCGTTTATATGCACCTATCGCAATGCGAGATTTTTCAAAAGATTTTATGCCCAGATTTTCGCCTCGACTAAGAAGTCCAGAGGACAGGGAAGTTTTTCTCGCCAATCTGAGGAAAATCTCACACCTGCAGAAGATCAATGGCCAGAAGTACATCATCCTTCTAGAGGAATATAAATAAAATGACAAAACCTGCAGAGTTGTGTATGCTGTTATGCTCCCCTTGGCTCGAGCTTAGCATGCCTGCCCTTCTATCCTGAAAA TTAGTAGATGCTTGCAGTTGCAGAACGTGACAGGCTTAACACATATTCTTGATTGACCTCATATTTTTCATACTAGTATACCCCCTTGTAAGTTGTAACAACAAATGATAGTTTG ] [+] EMBL AK073337 [ ACCAAACCAAAACCCTACGAAGAGGGGGAGAGCAGAGCAGCAGCGGCGGCGGCGGCGAAGGCGGAGAGAGCGCGCTCGGCGCACGGCATGGGTGTCTCCGCCGACGGCCTCGTGCTCAAGGCGGCGTGCGAGCGCTGCGGCTCGTCGTCGGACCTCCACGGCACGGGGTGCCGCCACGCCACCCTCTGCGTCTCCTGCGGCAGCGCCATGGCTCGCT CCGGCGATTGCTGCCCCGTCTGCGCCGCCCCCATCGCCAGCCTCATCCGGGAGTACAATGTCCTGGTGGATACCACCGGAGAGAAGCAATATACGATCGGCAAATTCACCACCGGTGTGCCGCCCTTCTCCGATAGGGAGAATGCGGGGAGCCGCAGCTGGTCTCTTCATCCCGAGGGACAGCAAGGACGGCAACCTACCGGCAATATATGGGAGAATTGCAGCAACAGAAAGTCATGTATTTTGGAAGATGATACAGGTGACTATCAGTACCAAGGTCAAATTCAGGGCTTACAATCTGCAGCCTCGACATATTATTTGTTGATGATGCATGGCAAGGATGTACACGCTGTTCCCGCTGATTCCTGGTATAACTTCAGTAAAATTTCACAGTACAAACAGCTGACTTTGGAAGAAGCTGAAGAGAAGATGAGCAGGAGGAGAAGCACAGCAACTGGGTATGGACGGTGGATGATGAAGGCGGCTACAAATGGAGCTGCTGCTTTTAGTTCAGATGTGACGCAGCTCGATGATGCTAATGAAGGAGAAACAGATCAGGTTCACCTGAAGAAAGGCAACAAGAATGGGGATGAAAATAAATCTGATAAAGGCAGTGGGGAAGAAAGAGCGCATGTGCCTATGACAAAGGGTAGGGAGGAGGAAGGTAGTAAAGACAGAGACTTTGATTTGGATGATGAAATTGAAAAGGGTGATGATTGGGAACATGAAGAGATCTTTACTGATGATGATGAAGCTGTGGACGTTGACCCAGAGGAAGGAGGTGATTTAGCTGATCCTGAAATCCCTGCTCCACCAGAAATTAAGCAGGATGATAATGAGAAACATGGAGGGGTAGGCCTGAGCAAATCTGGTAAGGAACTAAAGAAGTTGCTCCGCCGTGCCGCGGGACAAAACGAGTCTGATGATGACGATGAAGACACGGATGAAGATGAGTCACCATCGCCAGTACTTGCTCCGAAACAGCAGGATCAACTCAAAAGTGAACCACAGGAAGACAACCATTCTAAACCAACAGTTCTCGGACATCCTTATAGCACTCCACATGTTTCCAAATCCAATCAAAAGAGGAGACAAAGGGGTGATGATTCAAAAACTTGTGCTACCCCTAAAAAGCCGAAGATAGAGCCTGATACCAAGAAGATAGTCGTGAAGGAGGAGACCTCGTGTTCCTTGGAACCAACTTCAGAACCATTTGCCTCAGCGAGAAGTGATACAAATGTATCTCCTATTACAGTGGAGGAAATCAGGGTGGTACTTCGTTTATATGCACCTATCGCAATGCGAGATTTTTCAAAAGATTTTATGCCCAGATTTTCGCCTCGACTAAGAAGTCCAGAGGACAGGGAAGTTTTTCTCGCCAATCTGAGGAAAATCTCACACCTGCAGAAGATCAATGGCCAGAAGTACATCATCCTTCTAGAGGAATATAAATAAAATGACAAAACCTGCAGAGTTGTGTATGCTGTTATGCTCCCCTTGGCTCGAGCTTAGCATGCCTGCCCTTCTATCCTGAAAA TTAGTAGATGCTTGCAGTTGCAGAACGTGACAGGCTTAACACATATTCTTGATTGAACTCATATTTTTCATACTAGTATACCCCCTTGTAAGTTGTAACAACAAATGATAGTTTGTCATACTATTAGCAAATG ] [+] EMBL OSR22931A [ TGATGATGCATGGCAAGGATGTACACGCTGTTCCCGCTGATTCCTGGTATAACTTCAGTAAAATTTCACAGTACAAACAGCTGACTTTGGAAGAAGCTGAAGAGAAGATGAGCAGGAGGAGAAGCACAGCAACTGGGTATGGACGGTGGATGATGAAGGCGGCTACAAATGGAGCTGCTGCTTTTAGTTCAGATGTGACGCAGCTCGATGATGCTAATGAAGGAGAAACAGATCAGGTTCACCTGAAGAAAGGCAACAAGAATGGGGATGAAAATAAATCTGATAAAGGCAGTNGGGAAGAAAGAGCGCATGTTCCTATGACAAAGGGTA ] [+] EMBL AU101662 [ AACCTGCAGAGTTGTGTATGCTGTTATGCTCCCCTTGGCTCGAGCTTAGCATGCCTNCCCTTCTATCCTGAAAATTTAGTAGATGCTTGCAGTTGCAGAACGTGACAGGCTTAACACATATTCTTGATTGACCTCATATTTTTCATACTAGTATACCCCCTTGTAAGTTGTAACAACAAATGATAGTTTGTCATACTATTAGCAAATGATAGTTTGTCATACTATTGTTTTGTCGTGCTGAATAGCTCTGATGGGCAATAATCTGCTTGATCAGGTTTAATGTTAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||