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Oryza sativa
cluster # 6835 cluster # 6835       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6835#0 length = 1907 sequences # 2  
consensus_6835#1 length = 482 sequences # 1  
consensus_6835#2 length = 436 sequences # 1  

consensusID : consensus_6835#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1907
fasta sequence
                              [AAAGGCCTTGCCTTGCTGCATCTGTATCTGCTACTACCACTGCTAGTGCCACTCTCCAACACTCCACTGAATCATTCATCTTTTGAAGATTTTTTTTTTTACCTCTCTTCCTCCTGTGCTCTCCTCTCAATGCAAAAGAGCACACTCGACTCTTGCCTTCTCACCACCCAATCTCTCTTGCTCTAAGCTCTAGTTCTTCATCTCTCTTTCTCTATCACTTTCTTGAAGACAATGCAGGCTCTGGTGAGCTCCAACAGGAGGCCATTGGCCATTGTGGTTGCAGCACCAGTACTCCAGATGCTACTAATTGCTGCATTGCTCCATCTGGGTTCTTGCAATGGAGGAGACAGGATCGAGAGGCTACCAGGGCAGCCTGAGGTGAGCTTTGGGCAGTATGCTGGCTACGTTGGTGTGGATGACAAGGGCCGGAGGGCTCTCTTCTACTACTTTGTGGAGGCTGAGCTTGATCCTGCCACAAAGCCCCTTGTGCTCTGGCTCAATGGAGGTCCTGGCTGTTCTTCACTTGGTGTTGGAGCTTTCTCAGAGAATGGCCCATTCAGGCCAAGTGGGCAGGTGCTAGTGAAGAATGAGTACAGTTGGAACAAAGAGGCCAATGTGATCTACCTGGAGACACCAGCTGGTGTTGGTTACTCCTACTCTGCTGATGCTGCATACTACCAGGGTGTGGATGATAAGATGACAGCAATGGACAATATGGTGTTCTTGCAAAGGTGGCTTGAAAAGTTCCCACAGTACAAAGGCAGAGAACTGTACATTTCTGGAGAAAGCTATGCAGGGCATTACATTCCACAACTTGCTGATGTCATGGTGGAATTTAACAAGAAGAACAAGATCTTCAACCTCAAAGGGATTGCTCTGGGCAATCCTGTTCTTGAATTCACCACTGACTTCAACTCAAGGGCAGAGTACTTCTGGTCCCATGGGCTGATTTCAGACTCAACATACAGAATTTTCACCTCAGTTTGCAACTATTCTCGCTATGTCACCGAGTACTATGGCGGGTCGCTTACCCCGCTTTGCGCAAGGGTGATGAACCAAGTGACAAGGGAGACTAGCCGATTCGTCGACAAATACGACGTCACATTGGATGTCTGCCTGTCATCAGTCCTCTCTCAGTCCAAGATCCTCACTCCTCATCAACAAGTAGGACAGCGAATTGATGTTTGCGTCGAGGACGAGACGGTGAACTACCTGAACC-GGAAGGATGTGCAGGAAGCACTCCATGCGAAGCTCATCGGTGTAAAGAATTGGGCAGTTTGCAGCAGTGTTCTTGAGTATGAGCTACTCAATTTGCAGATTCCAACCATTAACATAGTGGGATCACTTGTAAAGTCTGGCATCCGGGTGCTAGTTTACAGCGGTGATCAAGACTCGGTGATCCCGCTAACCGGGAGCAGGACTCTTGTGCAGAACTTGGCGCGCGATTTGGGCCTCAAGACGTCGGTCCCGTACCGGGTTTGGTTTGAAGGGCAGCAGGTTGGTGGATGGACTCAGGTTTATGGAGACATGCTGTCCTTTGCCACCATCAGAGGGGCCTCCCACGAGGCGCCGTTCTCGCAGCCCGAGCGGTCTCTCGTGCTCTTCAGGGCATTCCTTCAGGGAAGGCCTCTGCCAGAAACCTTCTCATGATAGAAGAGAAGAAGCTGTTTTTGAAATTGCAATGCAATGGAAGTGCATTGCTGGGAGAATTGATTAGAGTTCTTCTGTTTCATGCTTCTGCAAGGGGTTAATTTGGTTAGCTCTGTAAGAAAGTTGTTTGCTGCATTTGCCTCCTGCTGCTAGTATAAAGCCGCGATAAGGGCAATCATTTGTTCGATCTCTCAAGGTATTTGTTCCCCTCTTTTTCTCTTCTGTATTAGTTCCAAGGCTTGGCAATTGTCTAAAGT]

[+] EMBL AK059293             [AAAGGCCTTGCCTTGCTGCATCTGTATCTGCTACTACCACTGCTAGTGCCACTCTCCAACACTCCACTGAATCATTCATCTTTTGAAGATTTTTTTTTTTACCTCTCTTCCTCCTGTGCTCTCCTCTCAATGCAAAAGAGCACACTCGACTCTTGCCTTCTCACCACCCAATCTCTCTTGCTCTAAGCTCTAGTTCTTCATCTCTCTTTCTCTATCACTTTCTTGAAGACAATGCAGGCTCTGGTGAGCTCCAACAGGAGGCCATTGGCCATTGTGGTTGCAGCACCAGTACTCCAGATGCTACTAATTGCTGCATTGCTCCATCTGGGTTCTTGCAATGGAGGAGACAGGATCGAGAGGCTACCAGGGCAGCCTGAGGTGAGCTTTGGGCAGTATGCTGGCTACGTTGGTGTGGATGACAAGGGCCGGAGGGCTCTCTTCTACTACTTTGTGGAGGCTGAGCTTGATCCTGCCACAAAGCCCCTTGTGCTCTGGCTCAATGGAGGTCCTGGCTGTTCTTCACTTGGTGTTGGAGCTTTCTCAGAGAATGGCCCATTCAGGCCAAGTGGGCAGGTGCTAGTGAAGAATGAGTACAGTTGGAACAAAGAGGCCAATGTGATCTACCTGGAGACACCAGCTGGTGTTGGTTACTCCTACTCTGCTGATGCTGCATACTACCAGGGTGTGGATGATAAGATGACAGCAATGGACAATATGGTGTTCTTGCAAAGGTGGCTTGAAAAGTTCCCACAGTACAAAGGCAGAGAACTGTACATTTCTGGAGAAAGCTATGCAGGGCATTACATTCCACAACTTGCTGATGTCATGGTGGAATTTAACAAGAAGAACAAGATCTTCAACCTCAAAGGGATTGCTCTGGGCAATCCTGTTCTTGAATTCACCACTGACTTCAACTCAAGGGCAGAGTACTTCTGGTCCCATGGGCTGATTTCAGACTCAACATACAGAATTTTCACCTCAGTTTGCAACTATTCTCGCTATGTCACCGAGTACTATGGCGGGTCGCTTACCCCGCTTTGCGCAAGGGTGATGAACCAAGTGACAAGGGAGACTAGCCGATTCGTCGACAAATACGACGTCACATTGGATGTCTGCCTGTCATCAGTCCTCTCTCAGTCCAAGATCCTCACTCCTCATCAACAAGTAGGACAGCGAATTGATGTTTGCGTCGAGGACGAGACGGTGAACTACCTGAACC GGAAGGATGTGCAGGAAGCACTCCATGCGAAGCTCATCGGTGTAAAGAATTGGGCAGTTTGCAGCAGTGTTCTTGAGTATGAGCTACTCAATTTGCAGATTCCAACCATTAACATAGTGGGATCACTTGTAAAGTCTGGCATCCGGGTGCTAGTTTACAGCGGTGATCAAGACTCGGTGATCCCGCTAACCGGGAGCAGGACTCTTGTGCAGAACTTGGCGCGCGATTTGGGCCTCAAGACGTCGGTCCCGTACCGGGTTTGGTTTGAAGGGCAGCAGGTTGGTGGATGGACTCAGGTTTATGGAGACATGCTGTCCTTTGCCACCATCAGAGGGGCCTCCCACGAGGCGCCGTTCTCGCAGCCCGAGCGGTCTCTCGTGCTCTTCAGGGCATTCCTTCAGGGAAGGCCTCTGCCAGAAACCTTCTCATGATAGAAGAGAAGAAGCTGTTTTTGAAATTGCAATGCAATGGAAGTGCATTGCTGGGAGAATTGATTAGAGTTCTTCTGTTTCATGCTTCTGCAAGGGGTTAATTTGGTTAGCTCTGTAAGAAAGTTGTTTGCTGCATTTGCCTCCTGCTGCTAGTATAAAGCCGCGATAAGGGCAATCATTTGTTCGATCTCTCAAGGTATTTGTTCCCCTCTTTTTCTCTTCTGTATTAGTTCCAAGGCTTGGCAATTGTCTAAAGT]
[+] EMBL AU030517             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATGGCGGGTCGCTTACCCCGCTTTGCGCAAGGGTGATGAACCAAGTGACAAGGGAGACTAGCCGATTCGTCGACAAATACGACGTCACATTGGATGTCTGCCTGTCATCAGTCCTCTCTCAGTCCAAGATCCTCACTCCTCATCAACAAGTAGGACAGCGAATTGATGTTTGCGTCGAGGACGANACGGTGAACTACCTGAACCGGGAANGATGTGCAGGgaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_6835#0 AAAGGCCTTGCCTTGCTGCATCTGTATCTGCTACTACCACTGCTAGTGCCACTCTCCAAC ACTCCACTGAATCATTCATCTTTTGAAGATTTTTTTTTTTACCTCTCTTCCTCCTGTGCT CTCCTCTCAATGCAAAAGAGCACACTCGACTCTTGCCTTCTCACCACCCAATCTCTCTTG CTCTAAGCTCTAGTTCTTCATCTCTCTTTCTCTATCACTTTCTTGAAGACAATGCAGGCT CTGGTGAGCTCCAACAGGAGGCCATTGGCCATTGTGGTTGCAGCACCAGTACTCCAGATG CTACTAATTGCTGCATTGCTCCATCTGGGTTCTTGCAATGGAGGAGACAGGATCGAGAGG CTACCAGGGCAGCCTGAGGTGAGCTTTGGGCAGTATGCTGGCTACGTTGGTGTGGATGAC AAGGGCCGGAGGGCTCTCTTCTACTACTTTGTGGAGGCTGAGCTTGATCCTGCCACAAAG CCCCTTGTGCTCTGGCTCAATGGAGGTCCTGGCTGTTCTTCACTTGGTGTTGGAGCTTTC TCAGAGAATGGCCCATTCAGGCCAAGTGGGCAGGTGCTAGTGAAGAATGAGTACAGTTGG AACAAAGAGGCCAATGTGATCTACCTGGAGACACCAGCTGGTGTTGGTTACTCCTACTCT GCTGATGCTGCATACTACCAGGGTGTGGATGATAAGATGACAGCAATGGACAATATGGTG TTCTTGCAAAGGTGGCTTGAAAAGTTCCCACAGTACAAAGGCAGAGAACTGTACATTTCT GGAGAAAGCTATGCAGGGCATTACATTCCACAACTTGCTGATGTCATGGTGGAATTTAAC AAGAAGAACAAGATCTTCAACCTCAAAGGGATTGCTCTGGGCAATCCTGTTCTTGAATTC ACCACTGACTTCAACTCAAGGGCAGAGTACTTCTGGTCCCATGGGCTGATTTCAGACTCA ACATACAGAATTTTCACCTCAGTTTGCAACTATTCTCGCTATGTCACCGAGTACTATGGC GGGTCGCTTACCCCGCTTTGCGCAAGGGTGATGAACCAAGTGACAAGGGAGACTAGCCGA TTCGTCGACAAATACGACGTCACATTGGATGTCTGCCTGTCATCAGTCCTCTCTCAGTCC AAGATCCTCACTCCTCATCAACAAGTAGGACAGCGAATTGATGTTTGCGTCGAGGACGAG ACGGTGAACTACCTGAACCGGAAGGATGTGCAGGAAGCACTCCATGCGAAGCTCATCGGT GTAAAGAATTGGGCAGTTTGCAGCAGTGTTCTTGAGTATGAGCTACTCAATTTGCAGATT CCAACCATTAACATAGTGGGATCACTTGTAAAGTCTGGCATCCGGGTGCTAGTTTACAGC GGTGATCAAGACTCGGTGATCCCGCTAACCGGGAGCAGGACTCTTGTGCAGAACTTGGCG CGCGATTTGGGCCTCAAGACGTCGGTCCCGTACCGGGTTTGGTTTGAAGGGCAGCAGGTT GGTGGATGGACTCAGGTTTATGGAGACATGCTGTCCTTTGCCACCATCAGAGGGGCCTCC CACGAGGCGCCGTTCTCGCAGCCCGAGCGGTCTCTCGTGCTCTTCAGGGCATTCCTTCAG GGAAGGCCTCTGCCAGAAACCTTCTCATGATAGAAGAGAAGAAGCTGTTTTTGAAATTGC AATGCAATGGAAGTGCATTGCTGGGAGAATTGATTAGAGTTCTTCTGTTTCATGCTTCTG CAAGGGGTTAATTTGGTTAGCTCTGTAAGAAAGTTGTTTGCTGCATTTGCCTCCTGCTGC TAGTATAAAGCCGCGATAAGGGCAATCATTTGTTCGATCTCTCAAGGTATTTGTTCCCCT CTTTTTCTCTTCTGTATTAGTTCCAAGGCTTGGCAATTGTCTAAAGT



consensusID : consensus_6835#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 482
fasta sequence
                              [TCCCCCNTCCCCGGGTTTGGTTTTGAAGGGGCANGCAGGGTTGGTTGGNATTGGACCTCAGGTTTTATTGGAAGACATGCTGTCCTTNGCCACCATCCAGAGGGNCCTCCCACGAGGCGCCCGTTCTCGCAGCCCGAGCGGTCTCTCGTGCTCTTCCAGGGCATTCCCTTCCAGGGAAGGCCTCTGCCAGAAACCTTCTCATGATAGAAGAGAAGAAGCTGTTTTTGAAATTGCAATGCAATGGAAGTGCATTGCTGGGAGAATTGATTAGAGTTCTTCTGTTTCATGCTTCTGCAAGGGGTTAATTTGGTTAGCTCTGTAAGAAAGTTGTTTGCTGCATTTGCCTCCTGCTGCTAGTATAAAGCCGCGATAAGGGCAATCATTTGTTCGATCTCTCAAGGTATTTGTTCCCCTCTTTTTCTCTTCTGTATTAGTTCCAAGGCTTGGCAATTGTCTAAAGTAAGTTGAAAGAAAAAAAAAAA]

[+] EMBL AU030518             [TCCCCCNTCCCCGGGTTTGGTTTTGAAGGGGCANGCAGGGTTGGTTGGNATTGGACCTCAGGTTTTATTGGAAGACATGCTGTCCTTNGCCACCATCCAGAGGGNCCTCCCACGAGGCGCCCGTTCTCGCAGCCCGAGCGGTCTCTCGTGCTCTTCCAGGGCATTCCCTTCCAGGGAAGGCCTCTGCCAGAAACCTTCTCATGATAGAAGAGAAGAAGCTGTTTTTGAAATTGCAATGCAATGGAAGTGCATTGCTGGGAGAATTGATTAGAGTTCTTCTGTTTCATGCTTCTGCAAGGGGTTAATTTGGTTAGCTCTGTAAGAAAGTTGTTTGCTGCATTTGCCTCCTGCTGCTAGTATAAAGCCGCGATAAGGGCAATCATTTGTTCGATCTCTCAAGGTATTTGTTCCCCTCTTTTTCTCTTCTGTATTAGTTCCAAGGCTTGGCAATTGTCTAAAGTAAGTTGAAAGAAAAAAAAAAA]


>consensus_6835#1 TCCCCCNTCCCCGGGTTTGGTTTTGAAGGGGCANGCAGGGTTGGTTGGNATTGGACCTCA GGTTTTATTGGAAGACATGCTGTCCTTNGCCACCATCCAGAGGGNCCTCCCACGAGGCGC CCGTTCTCGCAGCCCGAGCGGTCTCTCGTGCTCTTCCAGGGCATTCCCTTCCAGGGAAGG CCTCTGCCAGAAACCTTCTCATGATAGAAGAGAAGAAGCTGTTTTTGAAATTGCAATGCA ATGGAAGTGCATTGCTGGGAGAATTGATTAGAGTTCTTCTGTTTCATGCTTCTGCAAGGG GTTAATTTGGTTAGCTCTGTAAGAAAGTTGTTTGCTGCATTTGCCTCCTGCTGCTAGTAT AAAGCCGCGATAAGGGCAATCATTTGTTCGATCTCTCAAGGTATTTGTTCCCCTCTTTTT CTCTTCTGTATTAGTTCCAAGGCTTGGCAATTGTCTAAAGTAAGTTGAAAGAAAAAAAAA AA



consensusID : consensus_6835#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 436
fasta sequence
                              [AGGGTCCTGTGCCACCATAAGAGGGGCCTCCCGCGCAGCGCAGTTCTCGCAGCCCGAGCGGTCTCTGGTGCTCTTCAGGGCATTCTTTCAGGAAAGGCATGTGCCAGAGACCTTCTCATGATAGAAGAGAAGTAGCTGTTTTTGTAACTGCAATGCAATGGTAGTGCATTGCTGGGACAAGTCAGTATAGTTTTTATGTTTCACGATTGTGCAAGGGGTTTTAGCGGTTAGCTAGGTAAAGAAGTTGTCTGTGCGGTTGCCTCAGGCGGGCTAGTATAAAGCCCCGATAAGGGCAATCAGGGTTGGCTATCGGAAGGGACTGGTTCCCCTTTTTGTTTGTCGGATTAGTTTGCGAGGTCTCGAGCGTATTGTGTAAACAGAAGAAATAGACAAGAACAGGCAGCGGGCCGCAAGNNCTTATTCCCTTTAAGTGAGG]

[-] EMBL BI306578             [AGGGTCCTGTGCCACCATAAGAGGGGCCTCCCGCGCAGCGCAGTTCTCGCAGCCCGAGCGGTCTCTGGTGCTCTTCAGGGCATTCTTTCAGGAAAGGCATGTGCCAGAGACCTTCTCATGATAGAAGAGAAGTAGCTGTTTTTGTAACTGCAATGCAATGGTAGTGCATTGCTGGGACAAGTCAGTATAGTTTTTATGTTTCACGATTGTGCAAGGGGTTTTAGCGGTTAGCTAGGTAAAGAAGTTGTCTGTGCGGTTGCCTCAGGCGGGCTAGTATAAAGCCCCGATAAGGGCAATCAGGGTTGGCTATCGGAAGGGACTGGTTCCCCTTTTTGTTTGTCGGATTAGTTTGCGAGGTCTCGAGCGTATTGTGTAAACAGAAGAAATAGACAAGAACAGGCAGCGGGCCGCAAGNNCTTATTCCCTTTAAGTGAGG]


>consensus_6835#2 AGGGTCCTGTGCCACCATAAGAGGGGCCTCCCGCGCAGCGCAGTTCTCGCAGCCCGAGCG GTCTCTGGTGCTCTTCAGGGCATTCTTTCAGGAAAGGCATGTGCCAGAGACCTTCTCATG ATAGAAGAGAAGTAGCTGTTTTTGTAACTGCAATGCAATGGTAGTGCATTGCTGGGACAA GTCAGTATAGTTTTTATGTTTCACGATTGTGCAAGGGGTTTTAGCGGTTAGCTAGGTAAA GAAGTTGTCTGTGCGGTTGCCTCAGGCGGGCTAGTATAAAGCCCCGATAAGGGCAATCAG GGTTGGCTATCGGAAGGGACTGGTTCCCCTTTTTGTTTGTCGGATTAGTTTGCGAGGTCT CGAGCGTATTGTGTAAACAGAAGAAATAGACAAGAACAGGCAGCGGGCCGCAAGNNCTTA TTCCCTTTAAGTGAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6835#0      AAAGGCCTTGCCTTGCTGCATCTGTATCTGCTACTACCACTGCTAGTGCCACTCTCCAAC 60
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      ACTCCACTGAATCATTCATCTTTTGAAGATTTTTTTTTTTACCTCTCTTCCTCCTGTGCT 120
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      CTCCTCTCAATGCAAAAGAGCACACTCGACTCTTGCCTTCTCACCACCCAATCTCTCTTG 180
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      CTCTAAGCTCTAGTTCTTCATCTCTCTTTCTCTATCACTTTCTTGAAGACAATGCAGGCT 240
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      CTGGTGAGCTCCAACAGGAGGCCATTGGCCATTGTGGTTGCAGCACCAGTACTCCAGATG 300
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      CTACTAATTGCTGCATTGCTCCATCTGGGTTCTTGCAATGGAGGAGACAGGATCGAGAGG 360
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      CTACCAGGGCAGCCTGAGGTGAGCTTTGGGCAGTATGCTGGCTACGTTGGTGTGGATGAC 420
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      AAGGGCCGGAGGGCTCTCTTCTACTACTTTGTGGAGGCTGAGCTTGATCCTGCCACAAAG 480
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      CCCCTTGTGCTCTGGCTCAATGGAGGTCCTGGCTGTTCTTCACTTGGTGTTGGAGCTTTC 540
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      TCAGAGAATGGCCCATTCAGGCCAAGTGGGCAGGTGCTAGTGAAGAATGAGTACAGTTGG 600
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      AACAAAGAGGCCAATGTGATCTACCTGGAGACACCAGCTGGTGTTGGTTACTCCTACTCT 660
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      GCTGATGCTGCATACTACCAGGGTGTGGATGATAAGATGACAGCAATGGACAATATGGTG 720
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      TTCTTGCAAAGGTGGCTTGAAAAGTTCCCACAGTACAAAGGCAGAGAACTGTACATTTCT 780
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      GGAGAAAGCTATGCAGGGCATTACATTCCACAACTTGCTGATGTCATGGTGGAATTTAAC 840
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      AAGAAGAACAAGATCTTCAACCTCAAAGGGATTGCTCTGGGCAATCCTGTTCTTGAATTC 900
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      ACCACTGACTTCAACTCAAGGGCAGAGTACTTCTGGTCCCATGGGCTGATTTCAGACTCA 960
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      ACATACAGAATTTTCACCTCAGTTTGCAACTATTCTCGCTATGTCACCGAGTACTATGGC 1020
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      GGGTCGCTTACCCCGCTTTGCGCAAGGGTGATGAACCAAGTGACAAGGGAGACTAGCCGA 1080
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      TTCGTCGACAAATACGACGTCACATTGGATGTCTGCCTGTCATCAGTCCTCTCTCAGTCC 1140
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      AAGATCCTCACTCCTCATCAACAAGTAGGACAGCGAATTGATGTTTGCGTCGAGGACGAG 1200
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      ACGGTGAACTACCTGAACCGGAAGGATGTGCAGGAAGCACTCCATGCGAAGCTCATCGGT 1260
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      GTAAAGAATTGGGCAGTTTGCAGCAGTGTTCTTGAGTATGAGCTACTCAATTTGCAGATT 1320
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      CCAACCATTAACATAGTGGGATCACTTGTAAAGTCTGGCATCCGGGTGCTAGTTTACAGC 1380
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      GGTGATCAAGACTCGGTGATCCCGCTAACCGGGAGCAGGACTCTTGTGCAGAACTTGGCG 1440
consensus_6835#1      ------------------------------------------------------------
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      CGCGATTTGGGCCTCAAGACGTCGGTCCCGTACCGGGTTTGGTTT--GAAGGGCAGC--A 1496
consensus_6835#1      ----------------------TCCCCCNTCCCCGGGTTTGGTTTTGAAGGGGCANGCAG 38
consensus_6835#2      ------------------------------------------------------------
                                                                                  

consensus_6835#0      GGTTGGTGGAT----GGACTCAGGTTT-AT--GGAGACATGCTGTCCTTTGCCACCATC- 1548
consensus_6835#1      GGTTGGTTGGNATTGGACCTCAGGTTTTATTGGAAGACATGCTGTCCTTNGCCACCATCC 98
consensus_6835#2      ----------------------------------------AGGGTCCTGTGCCACCATA- 19
                                                                 *****  ********  

consensus_6835#0      AGAGGGGCCTCCCACGAGGCGCC-GTTCTCGCAGCCCGAGCGGTCTCTCGTGCTCTTC-A 1606
consensus_6835#1      AGAGGGNCCTCCCACGAGGCGCCCGTTCTCGCAGCCCGAGCGGTCTCTCGTGCTCTTCCA 158
consensus_6835#2      AGAGGGGCCTCCCGCGCAGCGCA-GTTCTCGCAGCCCGAGCGGTCTCTGGTGCTCTTC-A 77
                      ****** ****** **  ****  ************************ ********* *

consensus_6835#0      GGGCATTCCTT--CAGGGAAGGCCTCTGCCAGAAACCTTCTCATGATAGAAGAGAAGAAG 1664
consensus_6835#1      GGGCATTCCCTTCCAGGGAAGGCCTCTGCCAGAAACCTTCTCATGATAGAAGAGAAGAAG 218
consensus_6835#2      GGGCATTCTTT--CAGGAAAGGCATGTGCCAGAGACCTTCTCATGATAGAAGAGAAGTAG 135
                      ********  *  **** ***** * ******* *********************** **

consensus_6835#0      CTGTTTTTGAAATTGCAATGCAATGGAAGTGCATTGCTGGGAGAATTGATTAGAGTTCTT 1724
consensus_6835#1      CTGTTTTTGAAATTGCAATGCAATGGAAGTGCATTGCTGGGAGAATTGATTAGAGTTCTT 278
consensus_6835#2      CTGTTTTTGTAACTGCAATGCAATGGTAGTGCATTGCTGGGACAAGTCAGTATAGTTTTT 195
                      ********* ** ************* *************** ** * * ** **** **

consensus_6835#0      CTGTTTCATGCTTCTGCAAGGGGTTAATTTGGTTAGCTCTGTAAGAAAGTTGTTTGCTGC 1784
consensus_6835#1      CTGTTTCATGCTTCTGCAAGGGGTTAATTTGGTTAGCTCTGTAAGAAAGTTGTTTGCTGC 338
consensus_6835#2      ATGTTTCACGATTGTGCAAGGGGTTTTAGCGGTTAGCTAGGTAAAGAAGTTGTCTG-TGC 254
                       ******* * ** ***********     ********  ****  ******* ** ***

consensus_6835#0      ATTTGCCTCCTGCTG-CTAGTATAAAGCCGCGATAAGGGCAATCATTTGTTCGATCTCTC 1843
consensus_6835#1      ATTTGCCTCCTGCTG-CTAGTATAAAGCCGCGATAAGGGCAATCATTTGTTCGATCTCTC 397
consensus_6835#2      GGTTGCCTCAGGCGGGCTAGTATAAAGCCCCGATAAGGGCAATCAGG-GTTGGCTATCGG 313
                        *******  ** * ************* ***************   *** * * **  

consensus_6835#0      AAGGTATTTGTTCCCCTCTTTTTCTCTTCTGTATTAGTTC-CAAGGCTTGGCA---ATTG 1899
consensus_6835#1      AAGGTATTTGTTCCCCTCTTTTTCTCTTCTGTATTAGTTC-CAAGGCTTGGCA---ATTG 453
consensus_6835#2      AAGGGACTGGTTCCCC--TTTTTGTTTGTCGGATTAGTTTGCGAGGTCTCGAGCGTATTG 371
                      **** * * *******  ***** * *   * *******  * ***  * *     ****

consensus_6835#0      TCTAAAGT---------------------------------------------------- 1907
consensus_6835#1      TCTAAAGTAAGTTGAAAGAAAAAAAAAAA------------------------------- 482
consensus_6835#2      TGTAAACAGAAGAAATAGACAAGAACAGGCAGCGGGCCGCAAGNNCTTATTCCCTTTAAG 431
                      * ****                                                      

consensus_6835#0      -----
consensus_6835#1      -----
consensus_6835#2      TGAGG 436
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)