Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6836 cluster # 6836       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6836#0 length = 432 sequences # 4  

consensusID : consensus_6836#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 432
fasta sequence
                              [ATCAGTAGAAGAGATTGCTCAGGACATCAAACGGCCCAAATATTTCAGTCCAAGTGAAGCTGTGGATTATGGGATCATTGACAAGGTGCTGTACAATGAGAAAAGCCAAGAAGACGGTGGTGTCGTATCGGAGCTCAAAAGATCAAATTTGATATAGTATTACGCTAGATACAATCTCCCTGTAAGTTGGTAATAGGTCAGACACACGACATGCTTTGTAGTGCCATGGAGTAGCTGCCATTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTACACGCTGATACTTTTTTTTTTTTTTGATATGGGCTTTTTCCAATNTGGTGCCTGATAACTTGTACGGTGGCTTGGTGCAGAAACTTCTATTTTTTGTTTAGTTTTCTGAATGGCGATTCAAATGGTTAAAAAA]

[+] EMBL AU174399             [ATCAGTAGAAGAGATTGCTCAGGACATCAAACGGCCCAAATATTTCAGTCCAAGTGAAGCTGTGGATTATGGGATCATTGACAAGGTGCTGTACAATGAGAAAAGCCAAGAAGACGGTGGTGTCGTATCGGAGCTCAAAAGATCAAATTTGATATAGTATTACGCTAGATACAATCTCCCTGTAAGTTGGTAATAGGTCAGACACNCGACATGCTTTGTAGTGCCATGGAGTAGCTGCCATTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTACACGCTGATACTTTTTTTTTTTTTTGATATGGGCTTTTTCCAATNTGGTGCCTGATAACTTGTACGGTGGCTTGGTGCAGAAACTTCTATTTTTTGTTTAGTTTTCTGAATGGCGATTCAAATGGTTAAAAA ]
[+] EMBL CF307703             [                 CTCAGGACATCAAACGGCCCAAATATTTCAGTCCAAGTGAAGCTGTGGATTATGGGATCATTGACAAGGTGCTGTACAATGAGAAAAGCCAAGAAGACGGTGGTGTCGTATCGGAGCTCAAAAGATCAAATTTGATATAGTATTACGCTAGATACAATCTCCCTGTAAGTTGGTAATAGGTCAGACACACGACATGCTTTGTAGTGCCATGGAGTAGCTGCCATTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTACACGCTGATACTTTTTTTTTTTTTgaaaaa                                                                                                       ]
[-] EMBL CF307704             [                  TCAGGACATCAAACGGCCCAAATATTTCAGTCCAAGTGAAGCTGTGGATTATGGGATCATTGACAAGGTGCTGTACAATGAGAAAAGCCAAGAAGACGGTGGTGTCGTATCGGAGCTCAAAAGATCAAATTTGATATAGTATTACGCTAGATACAATCTCCCTGTAAGTTGGTAATAGGTCAGACACACGACATGCTTTGTAGTGCCATGGAGTAGCTGCCATTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTACACGCTGATACTTTTTTTTTTTTTgaaaaaa                                                                                                      ]
[+] EMBL CA764233             [                                                                                                                                                                                                                                           TGCCATTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTACACGCTGATAC  TTTTTTTTTTTTGATATGGGCTTTTTCCAATCTGGTGCCTGATAACTTGTACGGTGGCTTGGTGC GAAACTTCTATTTTTTGTTTAGTTTTCTGAATGGCGATTCAAATG   AAAAAA]


>consensus_6836#0 ATCAGTAGAAGAGATTGCTCAGGACATCAAACGGCCCAAATATTTCAGTCCAAGTGAAGC TGTGGATTATGGGATCATTGACAAGGTGCTGTACAATGAGAAAAGCCAAGAAGACGGTGG TGTCGTATCGGAGCTCAAAAGATCAAATTTGATATAGTATTACGCTAGATACAATCTCCC TGTAAGTTGGTAATAGGTCAGACACACGACATGCTTTGTAGTGCCATGGAGTAGCTGCCA TTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTAC ACGCTGATACTTTTTTTTTTTTTTGATATGGGCTTTTTCCAATNTGGTGCCTGATAACTT GTACGGTGGCTTGGTGCAGAAACTTCTATTTTTTGTTTAGTTTTCTGAATGGCGATTCAA ATGGTTAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)