cluster # 6845

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6845 cluster # 6845 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6845#0 length = 1882 sequences # 4
consensusID : consensus_6845#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1882
fasta sequence
                              [CACCAACAACTAATCCATCCCCCCCTCCACCTCCACGCGGTCAGCGCTCGCTCACGCGACACGCACCAACCCCTCTCCCCGCCGCCGCCGCCGCCACCAAACGCCGCCTCCGAAGAAGAAGAAGAAGCCTCCCTCGCAGGCAGCAGGGTATTTAATACGCCGCCCTGCTCGTCTCGGTTCCTGGGAACTTCTCTTCTCCTCCGATTTGGCCTGTCAGTGCGCTCCGCTCCGCTCGCGCCTATCCGCGGATTATCATGGGATCGACGGCGCTCGGTGGCGGGGCTCCTGCTCGCCTCGGCTTGGCCCCCAAGGATGGAGTCTTTGGATCTAATCTGAAGCAATGCGGTGGTTTCATGCTCAAAACAACCCCTAAGGTTGGATCCTCTTCAGTCCGTGTGAGGGCATCTGTTGCTTCTTCACCGCAGAAACAGCACTCTCCCAAGACATCAGGAGTTAAATCAGGGGAGGAGGTGCGCATTGCGGTTCTAGGTGCCAGCGGTTATACTGGAGCTGAGATTGTCAGGCTTCTAGCAAACCATCCTCAATTTCGTATCAAAGTGATGACTGCAGATAGAAAAGCTGGCGAACAGTTTGGATCTGTATTTCCTCACTTAATAACACAGGACCTGCCAAATTTAGTTGCAGTAAAAGATGCAGATTTTTCAAATGTGGATGCAGTTTTTTGTTGCTTGCCACATGGTACAACCCAGGAAATTATTAAAGGTTTACCGCAGGAACTGAAGATTGTTGATCTCTCTGCAGATTTTCGATTGCGTGATATCAATGAGTACGCTGAGTGGTATGGCCATTCTCATAGGGCACCAGAACTTCAGCAAGAAGCTGTGTATGGCTTGACTGAAGTTCTTCGCAATGAAATAAGGAATGCACGGCTTGTTGCAAATCCGGGATGTTATCCCACATCTATTCAACTTCCTCTTGTTCCTCTAATAAAGGCAAAACTGATCAAAGTGAGCAACATTATCATTGATGCAAAATCTGGGGTTAGTGGGGCAGGACGTGGAGCTAAGGAAGCCAATCTCTACACCGAGATAGCTGAAGGCATTCATGCTTATGGAATAAAAGGCCACCGGCATGTTCCTGAGATTGAACAAGGACTTTCAGAGGCTGCTGAGTCTAAAGTCACTATCAGCTTTACTCCAAATCTGATTTGTATGAAACGTGGGATGCAATCTACTATGTTCGTTGAAATGGCACCTGGAGTGACTGCCAATGATTTGTATCAGCATCTCAAGTCTACATATGAGGGTGAAGAATTTGTGAAACTGTTAAATGGTAGCAGCGTTCCTCACACACGCCATGTTGTGGGATCAAATTACTGCTTCATGAATGTCTTTGAGGACAGAATTCCTGGACGTGCCATCATCATATCTGTTATAGATAATCTTGTGAAGGGAGCATCA-GGTCAGG-CTGTTCAGAACCTTAATCTGATGATGGGTCTGCCAGAGAACA-CTGGGCTGCAATATCAACCCCTATTTCCTTGATCCTCTATGTCTGTGTTCCGTATGTTCTTTGTCGGGATGATACTTTGGAGTTCAGCTACCCA-TTTCCCTCTGTTTACTGTTGAGACAAGGTGCTCAACATCAGAGTGTAACCAAGACAAATTTTCTCAAAGAGTAGCTTGGTTTGTGCTGTTGTAGTTTTTATAGAGATAAATGACAATTTAGTAGTTTAATGAGAATATTAGCTCGGTGGATTTGGGCATTGAAATCCTACGGGTATATCCTGTACTGCTTTGTGGTTATGAAATCAAATAAAAGTGTAAACCTCAGTCAAGAGGCATCAATCACCCCGCCTTCATTGGATGTAGATAGGGATATATATTCATATTTTTACTCGATGGAATTTGTTTTGCTTGCTAATG]

[+] EMBL AK071544             [CACCAACAACTAATCCATCCCCCCCTCCACCTCCACGCGGTCAGCGCTCGCTCACGCGACACGCACCAACCCCTCTCCCCGCCGCCGCCGCCGCCACCAAACGCCGCCTCCGAAGAAGAAGAAGAAGCCTCCCTCGCAGGCAGCAGGGTATTTAATACGCCGCCCTGCTCGTCTCGGTTCCTGGGAACTTCTCTTCTCCTCCGATTTGGCCTGTCAGTGCGCTCCGCTCCGCTCGCGCCTATCCGCGGATTATCATGGGATCGACGGCGCTCGGTGGCGGGGCTCCTGCTCGCCTCGGCTTGGCCCCCAAGGATGGAGTCTTTGGATCTAATCTGAAGCAATGCGGTGGTTTCATGCTCAAAACAACCCCTAAGGTTGGATCCTCTTCAGTCCGTGTGAGGGCATCTGTTGCTTCTTCACCGCAGAAACAGCACTCTCCCAAGACATCAGGAGTTAAATCAGGGGAGGAGGTGCGCATTGCGGTTCTAGGTGCCAGCGGTTATACTGGAGCTGAGATTGTCAGGCTTCTAGCAAACCATCCTCAATTTCGTATCAAAGTGATGACTGCAGATAGAAAAGCTGGCGAACAGTTTGGATCTGTATTTCCTCACTTAATAACACAGGACCTGCCAAATTTAGTTGCAGTAAAAGATGCAGATTTTTCAAATGTGGATGCAGTTTTTTGTTGCTTGCCACATGGTACAACCCAGGAAATTATTAAAGGTTTACCGCAGGAACTGAAGATTGTTGATCTCTCTGCAGATTTTCGATTGCGTGATATCAATGAGTACGCTGAGTGGTATGGCCATTCTCATAGGGCACCAGAACTTCAGCAAGAAGCTGTGTATGGCTTGACTGAAGTTCTTCGCAATGAAATAAGGAATGCACGGCTTGTTGCAAATCCGGGATGTTATCCCACATCTATTCAACTTCCTCTTGTTCCTCTAATAAAGGCAAAACTGATCAAAGTGAGCAACATTATCATTGATGCAAAATCTGGGGTTAGTGGGGCAGGACGTGGAGCTAAGGAAGCCAATCTCTACACCGAGATAGCTGAAGGCATTCATGCTTATGGAATAAAAGGCCACCGGCATGTTCCTGAGATTGAACAAGGACTTTCAGAGGCTGCTGAGTCTAAAGTCACTATCAGCTTTACTCCAAATCTGATTTGTATGAAACGTGGGATGCAATCTACTATGTTCGTTGAAATGGCACCTGGAGTGACTGCCAATGATTTGTATCAGCATCTCAAGTCTACATATGAGGGTGAAGAATTTGTGAAACTGTTAAATGGTAGCAGCGTTCCTCACACACGCCATGTTGTGGGATCAAATTACTGCTTCATGAATGTCTTTGAGGACAGAATTCCTGGACGTGCCATCATCATATCTGTTATAGATAATCTTGTGAAGGGAGCATCA GGTCAGG CTGTTCAGAACCTTAATCTGATGATGGGTCTGCCAGAGAACA CTGGGCTGCAATATCAACCCCTATTTCCTTGATCCTCTATGTCTGTGTTCCGTATGTTCTTTGTCGGGATGATACTTTGGAGTTCAGCTACCCA TTTCCCTCTGTTTACTGTTGAGACAAGGTGCTCAACATCAGAGTGTAACCAAGACAAATTTTCTCAAAGAGTAGCTTGGTTTGTGCTGTTGTAGTTTTTATAGAGATAAATGACAATTTAGTAGTTTAATGAGAATATTAGCTCGGTGGATTTGGGCATTGAAATCCTACGGGTATATCCTGTACTGCTTTGTGGTTATGAAATCAAATAAAAGTGTAAACCTCAGTCAAGAGGCATCAATCACCCCGCCTTCATTGGATGTAGATAGGGATATATATTCATATTTTTACTCGATGGAATTTGTTTTGCTTGCTAATG]
[-] EMBL CA882821             [                                                                                                                                                                                                                                            GCCTATCCGCGGATTATCATGGGATCGACGGCGCTCGGTGGCGGGGCTCCTGCTCGCCTCGGCTTGGCCCCCAAGGATGGAGTCTTTGGATCTAATCTGAAGCAATGCGGTGGTTTCATGCTCAAAACAACCCCTAAGGTTGGATCCTCTTCAGTCCGTGTGAGGGCATCTGTTGCTTCTTCACCGCAGAAACAGCACTCTCCCGAGACATCAGGAGTTAAATCAGGGGAGGAGGTGCGCATTGCGGTTCTAGGTGCCAGCGGTTATACTGGAGCTGAGATTGTCAGGCTTCTAGCAAACCATCCTCAATTTCGTATCAAAGTGATGACTGCAGATAGAAAAGCTGGCGAACAGTTTGGATCTGTATTTCCTCACTTAATAACACAGGACCTGCCAAATTTAGTTGCAGTAAAAGATGCAGATTTTTCAAATGTGGATGCAGTTTTTTGTTGCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB617893             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTATGGAATAAAAGGCCACCGGCATGTTCCTGAGATTGAACAAGGACTTTCAGAGGCTGCTGAGTCTAAAGTCACTATCAGCTTTACTCCAAATCTGATTTGTATGAAACGTGGGATGCAATCTACTATGTTCGTTGAAATGGCACCTGGAGTGACTGCCAATGATTTGTATCAGCATCTCAAGTCTACATATGAGGGTGAAGAATTTGTGAAACTGTTAAATGGTAGCAGCGTTCCTCACACACGCCATGTTGTGGGATCAAATTACTGCTTCATGAATGTCTTTGAGGACAGAATTCCTGGACGTGCCATCATCATATCTGTTATAGATAATCTTGTGAAGGGAGCATCA GGTCAGG CTGTTCAGACCCTTAATCTGATGATGGGTCTGCCAGAGAACA CTGGGCTGCAATATCAACCCCTATTTCCTTGATCCTCTATGTCTGTGTTCCGTATGTTCTTTGTCGGGATGATACTTTGGAGTTCAGCTACCCA TTTCCCTCTGTTTACTGTTGAGACAAGGTGCTCAACATCAGAGTGTAACCAAGACAAATTTTCTCAAAGAGTAGCTTGGTTTGTGCTGTTGTAGTTTTTATAGAGATAAATGACAATTTAGTAGTTTAATGAGAATATTAGCTCGGTGGATTTGGGCATTGAAATCCTACGGGTATATCCTGTACTGCTTTGTGGTTATGAAATCAAATAAAAGT                                                                                                       ]
[+] EMBL BI811715             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TATAGATAATCTTGTGAAGGGAGCATCATGGTCAGGTCTGTTCAGAACCTTAATCTGATGATGGGTCTGCCAGAGAACACCTGGCTTCCAATATCAACCCCTATTTCCTTGATCCTCTATGTCTGTGTTCCGTATGTTCTTTGTCGGGATGATACTTTGGAGTTCAGCTACCCAGTTTCCCTCTGTTTACTGTTGAGACAAGGTGCTCAACATCAGAGTGTAACCAAGACAAATTTTCTCAAAGAGTAGCTTGGTTTGTGCTGTTGTAGTTTTTATAGAGATAAATGACAATTTAGTAGTTTAATGAGAATATTAGCTCGGTGGATTTGGGCATTGAAATCCTACGGGTATATCCTGTACTGCTTTGTGGTTATGAAATCAAATAAAAGTGTAAACCTCAGTCAAGAGGCATCAAaaaa                                                                          ]




>consensus_6845#0
CACCAACAACTAATCCATCCCCCCCTCCACCTCCACGCGGTCAGCGCTCGCTCACGCGAC
ACGCACCAACCCCTCTCCCCGCCGCCGCCGCCGCCACCAAACGCCGCCTCCGAAGAAGAA
GAAGAAGCCTCCCTCGCAGGCAGCAGGGTATTTAATACGCCGCCCTGCTCGTCTCGGTTC
CTGGGAACTTCTCTTCTCCTCCGATTTGGCCTGTCAGTGCGCTCCGCTCCGCTCGCGCCT
ATCCGCGGATTATCATGGGATCGACGGCGCTCGGTGGCGGGGCTCCTGCTCGCCTCGGCT
TGGCCCCCAAGGATGGAGTCTTTGGATCTAATCTGAAGCAATGCGGTGGTTTCATGCTCA
AAACAACCCCTAAGGTTGGATCCTCTTCAGTCCGTGTGAGGGCATCTGTTGCTTCTTCAC
CGCAGAAACAGCACTCTCCCAAGACATCAGGAGTTAAATCAGGGGAGGAGGTGCGCATTG
CGGTTCTAGGTGCCAGCGGTTATACTGGAGCTGAGATTGTCAGGCTTCTAGCAAACCATC
CTCAATTTCGTATCAAAGTGATGACTGCAGATAGAAAAGCTGGCGAACAGTTTGGATCTG
TATTTCCTCACTTAATAACACAGGACCTGCCAAATTTAGTTGCAGTAAAAGATGCAGATT
TTTCAAATGTGGATGCAGTTTTTTGTTGCTTGCCACATGGTACAACCCAGGAAATTATTA
AAGGTTTACCGCAGGAACTGAAGATTGTTGATCTCTCTGCAGATTTTCGATTGCGTGATA
TCAATGAGTACGCTGAGTGGTATGGCCATTCTCATAGGGCACCAGAACTTCAGCAAGAAG
CTGTGTATGGCTTGACTGAAGTTCTTCGCAATGAAATAAGGAATGCACGGCTTGTTGCAA
ATCCGGGATGTTATCCCACATCTATTCAACTTCCTCTTGTTCCTCTAATAAAGGCAAAAC
TGATCAAAGTGAGCAACATTATCATTGATGCAAAATCTGGGGTTAGTGGGGCAGGACGTG
GAGCTAAGGAAGCCAATCTCTACACCGAGATAGCTGAAGGCATTCATGCTTATGGAATAA
AAGGCCACCGGCATGTTCCTGAGATTGAACAAGGACTTTCAGAGGCTGCTGAGTCTAAAG
TCACTATCAGCTTTACTCCAAATCTGATTTGTATGAAACGTGGGATGCAATCTACTATGT
TCGTTGAAATGGCACCTGGAGTGACTGCCAATGATTTGTATCAGCATCTCAAGTCTACAT
ATGAGGGTGAAGAATTTGTGAAACTGTTAAATGGTAGCAGCGTTCCTCACACACGCCATG
TTGTGGGATCAAATTACTGCTTCATGAATGTCTTTGAGGACAGAATTCCTGGACGTGCCA
TCATCATATCTGTTATAGATAATCTTGTGAAGGGAGCATCAGGTCAGGCTGTTCAGAACC
TTAATCTGATGATGGGTCTGCCAGAGAACACTGGGCTGCAATATCAACCCCTATTTCCTT
GATCCTCTATGTCTGTGTTCCGTATGTTCTTTGTCGGGATGATACTTTGGAGTTCAGCTA
CCCATTTCCCTCTGTTTACTGTTGAGACAAGGTGCTCAACATCAGAGTGTAACCAAGACA
AATTTTCTCAAAGAGTAGCTTGGTTTGTGCTGTTGTAGTTTTTATAGAGATAAATGACAA
TTTAGTAGTTTAATGAGAATATTAGCTCGGTGGATTTGGGCATTGAAATCCTACGGGTAT
ATCCTGTACTGCTTTGTGGTTATGAAATCAAATAAAAGTGTAAACCTCAGTCAAGAGGCA
TCAATCACCCCGCCTTCATTGGATGTAGATAGGGATATATATTCATATTTTTACTCGATG
GAATTTGTTTTGCTTGCTAATG
clustalw multiple alignements is not computed in this case