cluster # 6874

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Oryza sativa
cluster # 6874 cluster # 6874 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6874#0 length = 571 sequences # 4

consensusID : consensus_6874#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 571
fasta sequence

                              [TTCAAACACAAAAGCTTAACGGAAGGCTCGAGAAGAAGATTGAGGCAAGAGATAAGGAATAACTTTGATTTCTTTGC-TTTTAAAGATCCA-GTGC-TATTTGTTGGCCACCT-ATCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGG-ATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGACATATATACGGTACATGAT-CCATGCCGTCCTGGCACATCTCAACTTTTGG-CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT-CCTTGGGTAGCCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA-ATCGCTGCGCGAGTTTTGTCATACTTG-TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCATTG-AGCCAAAAAAAAAAAAAAAAA]

[+] EMBL BM422113             [TTCAAACACAAAAGCTTAACGGAAGGCTCGAGAAGAAGATTGAGGCAAGAGATAAGGAATAACTTTGATTTCTTTGC TTTTAAAGATCCACGTGC TATTTGTTGGCCACCT ATCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGG ATGGATGTAGTTGAAGGTTTTGGCGCACCCGTTCATAGACATATATACGGTACATGAT CCATGCCGTCCTGGCACATCTCAACTTTTGG CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCC AACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT CCTTGGGTA CCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA ATCGCTGCGCGAGTTTTGTCATACTTG TTGCNGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTCGTTGTTNNCATTG TGCCAAAAAAAAAAAAAAAAA]
[+] EMBL AU031900             [                                                                      TCTTTGCNTTTTAAAGATCCA GTGCTTATTTGTTGGCCACCTNTTCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGGAATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGNCATACATACGGTACATGATCCCATGCCGTCCTGGCACATCTCAACTTTTGGNCACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT CCTTGGGTAGCCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTANAT  CTGCGCGAGTTTTGTCATACTTGCCTG TGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCAaaa aa                   ]
[+] EMBL BI805899             [                                                                                        CCA GTGC TATTTGTTGGCCACCT ATCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGG ATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGACATATATACGGTACATGAT CCATGCCGTCCTGGCACATCTCAACTTTTGG CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTTCCCTTGGGTAGCCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA ATCGCTGCGCGAGTTTTGTCATACTTG TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCATTGCCGCCAAAAAAAAAA       ]
[+] EMBL AU173371             [                                                                                                                       ACAACTCTGTTCTAATGGTAGAGAAGAGATGG ATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGACATATATACGGTACATGAT CCATGCCGTCCTGGCACATCTCAACTTTTGG CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT CCTTGGGTAGCCNTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA ATCNCTGCGCGAGTTTTGTCATACTTG TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCAaaaaa                    ]




>consensus_6874#0
TTCAAACACAAAAGCTTAACGGAAGGCTCGAGAAGAAGATTGAGGCAAGAGATAAGGAAT
AACTTTGATTTCTTTGCTTTTAAAGATCCAGTGCTATTTGTTGGCCACCTATCAGACAAC
TCTGTTCTAATGGTAGAGAAGAGATGGATGGATGTAGTTGAAGGTTTTGGCGCACCAGTT
CATAGACATATATACGGTACATGATCCATGCCGTCCTGGCACATCTCAACTTTTGGCACT
TGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGT
TTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCA
ACTAATATGGGTTAATGCTGTCAAATGGCTATTGTTCCTTGGGTAGCCTTGCTGTATTCT
TTTTTCTTTTAGCGTACGAAATTTAGTGGACTAATCGCTGCGCGAGTTTTGTCATACTTG
TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTT
GTTTGCATTGAGCCAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case