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Oryza sativa
cluster # 6889 cluster # 6889       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6889#0 length = 788 sequences # 4  

consensusID : consensus_6889#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 788
fasta sequence
                              [AATTTCTATTACATTTTATATCTCCACTGGCAAATACCAGTATGTAAACACACTTTCCCCCTTTCTAGTACAAGAAAGAGCAAACAACAATGTTACATCACTTGATGCTTTGGGTAGATTAGTATGCACTTAGTTCTGTATCCTGTAACTATGCTAGTATTTAATCTGTTAGTGCCATTGAATGGTTAGTTTGCAATCTGCTGCTTGAACCTTGCCATCGTAGCAAGCCTCTCAGCAGCCTCAACCAAATGATCAAGCCTAGCAACAAATTCAATCAGTAGTGATGTGAAAGTTGCAAGTGACAGCGCTGTGGTGCTTTCAAGTGCACGCATCCTTGGAATGAGATCAGAAACAACATTTTCGTCATCTTCAAAATCATCCACCTCCCTGGAAGGCCATGAATGCAGCTTCCTCTGCTGCCTTTTCATCATCTCATGGTAGGATTCAACTTCCATCGCCATTGGTGTTCTGGTTTCAGTTGTCTTGCTTTCTGGTTCACCGGACTGGTTCTTGAAAGACACAACCCTTGAGATTTTCAATTGTGGTTTGGCATAGTTGTCTTCCTGACTTGCGGTGAACAGGTAGGAGTGCAAGTCAATTGAATGTTGCAGACGCTCGGTCGAGACATGAACATGCTTAAGTAAGCTAGTTTGGAGGCTCCACTTCATGTTGTTTAAATCTTTTGCCAAACTGCGCAACAGCTCCGCTGCTTGCTTTGTGGCATCTAAGATCTCGGACTTGAAGGCACACCTTAGGTTGTATGGGGCCTGAATCTCTGAGTGCACGCA]

[+] EMBL CB618460             [AATTTCTATTACATTTTATATCTCCACTGGCAAATACCAGTATGTAAACACACTTTCCCCCTTTCTAGTACAAGAAAGAGCAAACAACAATGTTACATCACTTGATGCTTTGGGTAGATTAGTATGCACTTAGTTCTGTATCCTGTAACTATGCTAGTATTTAATCTGTTAGTGCCATTGAATGGTTAGTTTGCAATCTGCTGCTTGAACCTTGCCATCGTAGCAAGCCTCTCAGCAGCCTCAACCAAATGATCAAGCCTAGCAACAAATTCAATCAGTAGTGATGTGAAAGTTGCAAGTGACAGCGCTGTGGTGCTTTCAAGTGCACGCATCCTTGGAATGAGATCAGAAACAACATTTTCGTCATCTTCAAAATCATCCACCTCCCTGGAAGGCCATGAATGCAGCTTCCTCTGCTGCCTTTTCATCATCTCATGGTAGGATTCAACTTCCATCGCCATTGGTGTTCTGGTTTCAGTTGTCTTGCTTTCTGGTTCACCGGACTGGTTCTTGAAAGACACAACCCTTGAGATTTTCAATTGTGGTTTGGCATAGTTGTCTTCCTGACTTGCGGTGAACAGGTAGGAGTGCAAGTCAATTGAATGTTGCAGACGCTCGGTCGAGACATGAACATGCTTAAGTAAGCTAGTTTGGAGGCTCCACTTCATGTTGTTTAAATCTTTTGCCAAACTGCGCAACAGCTCCGCTGCTTGCTTTGTGGCATCTAAGATCTCGGACTTGAAGGCACACCTTAGGTTGTATGGGGCCTGAATCTCTGAGTGCACGCA]
[+] EMBL CB618456             [AATTTCTATTACATTTTATATCTCCACTGGCAAATACCAGTATGTAAACACACTTTCCCCCTTTCTAGTACAAGAAAGAGCAAACAACAATGTTACATCACTTGATGCTTTGGGTAGATTAGTATGCACTTAGTTCTGTATCCTGTAACTATGCTAGTATTTAATCTGTTAGTGCCATTGAATGGTTAGTTTGCAATCTGCTGCTTGAACCTTGCCATCGTAGCAAGCCTCTCAGCAGCCTCAACCAAATGATCAAGCCTAGCAACAAATTCAATCAGTAGTGATGTGAAAGTTGCAAGTGACAGCGCTGTGGTGCTTTCAAGTGCACGCATCCTTGGAATGAGATCAGAAACAACATTTTCGTCATCTTCAAAATCATCCACCTCCCTGGAAGGCCATGAATGCAGCTTCCTCTGCTGCCTTTTCATCATCTCATGGTAGGATTCAACTTCCATCGCCATTGGTGTTCTGGTTTCAGTTGTCTTGCTTTCTGGTTCACCGGACTGGTTCTTGAAAGACACAACCCTTGAGATTTTCAATTGTGGTTTGGCATAGTTGTCTTCCTGACTTGCGGTGAACAGGTAGGAGTGCAAGTCAATTGAATGTTGCAGACGCTCGGTCGAGACATGAACATGCTTAAGTAAGCTAGTTTGGAGGCTCCACTTCATGTTGTTTAAATCTTTTGCCAAACTGCGCAACAGCTCCGCTGCTTGCTTTGTGGCATCTAAGATCTCGGACTTGAAGGCACACCTTAGG                                ]
[+] EMBL CB618379             [AATTTCTATTACATTTTATATCTCCACTGGCAAATACCAGTATGTAAACACACTTTCCCCCTTTCTAGTACAAGAAAGAGCAAACAACAATGTTACATCACTTGATGCTTTGGGTAGATTAGTATGCACTTAGTTCTGTATCCTGTAACTATGCTAGTATTTAATCTGTTAGTGCCATTGAATGGTTAGTTTGCAATCTGCTGCTTGAACCTTGCCATCGTAGCAAGCCTCTCAGCAGCCTCAACCAAATGATCAAGCCTAGCAACAAATTCAATCAGTAGTGATGTGAAAGTTGCAAGTGACAGCGCTGTGGTGCTTTCAAGTGCACGCATCCTTGGAATGAGATCAGAAACAACATTTTCGTCATCTTCAAAATCATCCACCTCCCTGGAAGGCCATGAATGCAGCTTCCTCTGCTGCCTTTTCATCATCTCATGGTAGGATTCAACTTCCATCGCCATTGGTGTTCTGGTTTCAGTTGTCTTGCTTTCTGGTTCACCGGACTGGTTCTTGAAAGACACAACCCTTGAGATTTTCAATTGTGGTTTGGCATAGTTGTCTTCCTGACTTGCGGTGAACAGGTAGGAGTGCAAGTCAATTGAATGTTGCAGACGCTCGGTCGAGACATGAACATGCTTAAGTAAGCTAGTTTGGAGGCTCCACTTCATGTTGTTTAAATCTTTTGCCAAACTGCGCAACAGCTCCGCTGCTTGCTTTGTGGCATCTAAGATCTCGGACTTG                                               ]
[+] EMBL CB618458             [AATTTCTATTACATTTTATATCTCCACTGGCAAATACCAGTATGTAAACACACTTTCCCCCTTTCTAGTACAAGAAAGAGCAAACAACAATGTTACATCACTTGATGCTTTGGGTAGATTAATATGCACTTAGTTCTGTATCCTGTAACTATGCTAGTATTTAATCTGTTAGTGCCATTGAATGGTTAGTTTGCAATCTGCTGCTTGAACCTTGCCATCGTAGCAAGCCTCTCAGCAGCCTCAACCAAATGATCAAGCCTAGCAACAAATTCAATCAGTAGTGATGTGAAAGTTGCAAGTGACAGCGCTGTGGTGCTTTCAAGTGCACGCATCCTTGGAATGAGATCAGAAACAACATTTTCGTCATCTTCAAAATCATCCACCTCCCTGGAAGGCCATGAATGCAGCTTCCTCTGCTGCCTTTTCATCATCTCATGGTAGGATTCAACTTCCATCGCCATTGGTGTTCTGGTTTCAGTTGTCTTGCTTTCTGGTTCACCGGACTGGTTCTTGAAAGACACAACCCTTGAGATTTTCAATTGTGGTTTGGCATAGTTGTCTTCCTGACTTGCGGTGAACAGGTAGGAGTGCAAGTCAATTGAATGTTGCACACGCTCGGTCGAGACATGAACATGCTTAAGTAAGCTAGTTTGGAGGCTCCACTTCATGTTGTTTAAATCTTTTGCCAAACTGCGCAACA                                                                                        ]


>consensus_6889#0 AATTTCTATTACATTTTATATCTCCACTGGCAAATACCAGTATGTAAACACACTTTCCCC CTTTCTAGTACAAGAAAGAGCAAACAACAATGTTACATCACTTGATGCTTTGGGTAGATT AGTATGCACTTAGTTCTGTATCCTGTAACTATGCTAGTATTTAATCTGTTAGTGCCATTG AATGGTTAGTTTGCAATCTGCTGCTTGAACCTTGCCATCGTAGCAAGCCTCTCAGCAGCC TCAACCAAATGATCAAGCCTAGCAACAAATTCAATCAGTAGTGATGTGAAAGTTGCAAGT GACAGCGCTGTGGTGCTTTCAAGTGCACGCATCCTTGGAATGAGATCAGAAACAACATTT TCGTCATCTTCAAAATCATCCACCTCCCTGGAAGGCCATGAATGCAGCTTCCTCTGCTGC CTTTTCATCATCTCATGGTAGGATTCAACTTCCATCGCCATTGGTGTTCTGGTTTCAGTT GTCTTGCTTTCTGGTTCACCGGACTGGTTCTTGAAAGACACAACCCTTGAGATTTTCAAT TGTGGTTTGGCATAGTTGTCTTCCTGACTTGCGGTGAACAGGTAGGAGTGCAAGTCAATT GAATGTTGCAGACGCTCGGTCGAGACATGAACATGCTTAAGTAAGCTAGTTTGGAGGCTC CACTTCATGTTGTTTAAATCTTTTGCCAAACTGCGCAACAGCTCCGCTGCTTGCTTTGTG GCATCTAAGATCTCGGACTTGAAGGCACACCTTAGGTTGTATGGGGCCTGAATCTCTGAG TGCACGCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)