cluster # 6898

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Oryza sativa
cluster # 6898 cluster # 6898 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6898#0 length = 1242 sequences # 4
consensusID : consensus_6898#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1242
fasta sequence
                              [AGACCGGACGACCATTCTCGAGGCTAAAAACGTCTAACGTTGAACAAAGCAAAGCAAGTAATTGCCATGTACAGATGTACTCGTTGGTGATGACAGTGACGGAATCCCCATGTTGACCTGCTCGTCTACTAACCCAAGGTTAGCTTATCCGGTGTTGATTAAACCGGCGGCGAGGTAGTAGTAGTAGTAGGGCTTTGCTCTGGTCTTGCAAGTTAGGTTAGTGATTAGTAGCAGCAGAAAGAGTGGAAGATTTAGAGGATAAGGGATAGTTTGGTCATGTCGGATACAGCCTTGTCGGGCGCGCCGCCGGCGGCG-AGG-TCGGAGGATTCGTGGAGTCAGCAGCAGAGCTACAACTTCAGCGGGCGCGTGCTGCTCACGGCCGTCGTGATCCTGTTCGTGATCGCCGTCGTCTTCGCCGTCACCCGCGTCTTGCTGTACTACCTCGTGGTGCGGCCCGGCGGTGGCGGCGGAGGCCGTCGTCGTGGCGGCCTGGCAGGGGGGATCTTGCGGTCGTTGAACTCGCTCGGCGTGAGCGGTCGCCGCGGGCTGGACGCGTCCGCGCTCGCCGCGCTGCCGGTCACCGCGTACCGGAAGAACGGCGGCGGNGGCGGTGGTGGGGAGGGCTCCAACCGCGGCGGGCCTGGCGCCACCGCCGCCGACTGCGCCGTGTGTCTGTCGGAGCTCGCCGACGGCGAGAAGGTGCGGGAGCTGCCCAACTGCCGGCACGTCTTCCACGTGGAGTGCGTCGACGCGTGGCTGCGCTCCAGGACCACGTGCCCGCTCTGCCGGGCCGAGGCGGAAGTACCCAAGGCGAGGGCTTCGGCGGCGGCGACGGCGACGGCGCAGTCG-TCGTCGTCGCT-CGG-TGACGG-AGGAA-TTACCGTGGTCG-TGACCA-TACA-CGGCGG-CTC-TGA-CGAAGCCGG-TGGC-AGGTCAACGGCGTTGACTGG-TCAACCGGGATCCTCGAACT-CTCCTAGCTGCGAGGCTGCAAGGAATTGAGGATCGACGATGACGACGAACTTCAGAGTTGTGATGTGATTCTTTATTTTGCTATAGGAGCTCTATCAAGTGTAGATTGTGAAACGCATTTGTGATGTGATTCTTTATTTCTTTCCCATATATAGCTAAGAAACAACTGCATAATACATTCCCCGCAAAAGAAAAAAAAGCAAAAGTAAAGTGCTTCTGTGGTAATTGTTACGAGTTTTGTTCCATTGAATATAGTCAAGACGATTGCATAGCAAAAAAAAA]

[+] EMBL CA756270             [AGACCGGACGACCATTCTCGAGGCTAAAAACGTCTAACGTTGAACAAAGCAAAGCAAGTAATTGCCATGTACAGATGTACTCGTTGGTGATGACAGTGACGGAATCCCCATGTTGACCTGCTCGTCTACTAACCCAAGGTTAGCTTATCCGGTGTTGATTAAACCGGCGGCGAGGTAGTAGTAGTAGTAGGGCTTTGCTCTGGTCTTGCAAGTTAGGTTAGTGATTAGTAGCAGCAGAAAGAGTGGAAGATTTAGAGGATAAGGGATAGTTTGGTCATGTCGGATACAGCCTTGTCGGGCGCGCCGCCGGCGGCG AGG TCGGAGGATTCGTGGAGTCAGCAGCAGAGCTACAACTTCAGCGGGCGCGTGCTGCTCACGGCCGTCGTGATCCTGTTCGTGATCGCCGTCGTCTTCGCCGTCACCCGCGTCTTGCTGTACTACCTCGTGGTGCGGCCCGGCGGTGGCGGCGGAGGCCGTCGTCGTGGCGGCCTGGCAGGGGGGATCTTGCGGTCGTTGAACTCGCTCGGCGTGAGCGGTCGCCGCGGGCTGGACGCGTCCGCGCTCGCCGCGCTGCCGGTCACCGCGTACCGGAAGAACGGCGGCGGNGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK068075             [                                                                                                                                                                                                    GCTCTGGTCTTGCAAGTTAGGTTAGTGATTAGTAGCAGCAGAAAGAGTGGAAGATTTAGAGGATAAGGGATAGTTTGGTCATGTCGGATACAGCCTTGTCGGGCGCGCCGCCGGCGGCG AGG TCGGAGGATTCGTGGAGTCAGCAGCAGAGCTACAACTTCAGCGGGCGCGTGCTGCTCACGGCCGTCGTGATCCTGTTCGTGATCGCCGTCGTCTTCGCCGTCACCCGCGTCTTGCTGTACTACCTCGTGGTGCGGCCCGGCGGTGGCGGCGGAGGCCGTCGTCGTGGCGGCCTGGCAGGGGGGATCTTGCGGTCGTTGAACTCGCTCGGCGTGAGCGGTCGCCGCGGGCTGGACGCGTCCGCGCTCGCCGCGCTGCCGGTCACCGCGTACCGGAAGAACGGCGGCGGGGGCGGTGGTGGGGAGGGCTCCAACCGCGGCGGGCCTGGCGCCACCGCCGCCGACTGCGCCGTGTGTCTGTCGGAGCTCGCCGACGGCGAGAAGGTGCGGGAGCTGCCCAACTGCCGGCACGTCTTCCACGTGGAGTGCGTCGACGCGTGGCTGCGCTCCAGGACCACGTGCCCGCTCTGCCGGGCCGAGGCGGAAGTACCCAAGGCGAGGGCTTCGGCGGCGGCGACGGCGACGGCGCAGTCG TCGTCGTCGCT CGG TGACGG AGGAA TTACCGTGGTCG TGACCA TACA CGGCGG CTC TGA CGAAGCCGG TGGC AGGTCAACGGCGTTGACTGG TCAACCGGGATCCTCGAACT CTCCTAGCTGCGAGGCTGCAAGGAATTGAGGATCGACGATGACGACGAACTTCAGAGTTGTGATGTGATTCTTTATTTTGCTATAGGAGCTCTATCAAGTGTAGATTGTGAAACGCATTTGTGATGTGATTCTTTATTTCTTTCCCATATATAGCTAAGAAACAACTGCATAATA                                                                                                          ]
[+] EMBL OSS1176A             [                                                                                                                                                                                                                                                   TGGAAGATTTAGAGGATAAGGGATAGTTTGGTCATGTCGGATACAGCNTNNTCGGGCGCGCCGCCGG GGCGAAGGTTCGGAGGATTCGTGGAGTCAGCAGCAGAGCTACAACTTCAGCGGGCGCGTGCTGCTCACGGCCGTCGTGNTCCTNTNCGNGATCGCCGTCGTCTTNGCCGTCACCCGNGTCTnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU101930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCGTTCGTC  CGCTCCGGTTGACGGTAGGAATTTACCGTGGTCGTTGACCATTACACCGGCGGNCTCTTGACCGAAGCCGGTTGGCAAGNTCAACGGCGTTGACTGGTTCAACCGGGATCCTCGAACTCCTCCTAGCTGCGAGGCTGCAAGGAATTGAGGATCGACGATGACGACGAACTTCAGAGTTGTGATGTGATTCTTTATTTTGCTATAGGAGCTCTATCAAGTGTAGATTGTGAAACGCATTTGTGATGTGATTCTTTATTTCTTTCCCATATATAGCTAAGAAACAACTGCATAATACATTCCCCGCAAAAGAAAAAAAAGCAAAAGTAAAGTGCTTCTGTGGTAATTGTTACGAGTTTTGTTCCATTGAATATAGTCAAGACGATTGCATAGCAAAAAAAAA]




>consensus_6898#0
AGACCGGACGACCATTCTCGAGGCTAAAAACGTCTAACGTTGAACAAAGCAAAGCAAGTA
ATTGCCATGTACAGATGTACTCGTTGGTGATGACAGTGACGGAATCCCCATGTTGACCTG
CTCGTCTACTAACCCAAGGTTAGCTTATCCGGTGTTGATTAAACCGGCGGCGAGGTAGTA
GTAGTAGTAGGGCTTTGCTCTGGTCTTGCAAGTTAGGTTAGTGATTAGTAGCAGCAGAAA
GAGTGGAAGATTTAGAGGATAAGGGATAGTTTGGTCATGTCGGATACAGCCTTGTCGGGC
GCGCCGCCGGCGGCGAGGTCGGAGGATTCGTGGAGTCAGCAGCAGAGCTACAACTTCAGC
GGGCGCGTGCTGCTCACGGCCGTCGTGATCCTGTTCGTGATCGCCGTCGTCTTCGCCGTC
ACCCGCGTCTTGCTGTACTACCTCGTGGTGCGGCCCGGCGGTGGCGGCGGAGGCCGTCGT
CGTGGCGGCCTGGCAGGGGGGATCTTGCGGTCGTTGAACTCGCTCGGCGTGAGCGGTCGC
CGCGGGCTGGACGCGTCCGCGCTCGCCGCGCTGCCGGTCACCGCGTACCGGAAGAACGGC
GGCGGNGGCGGTGGTGGGGAGGGCTCCAACCGCGGCGGGCCTGGCGCCACCGCCGCCGAC
TGCGCCGTGTGTCTGTCGGAGCTCGCCGACGGCGAGAAGGTGCGGGAGCTGCCCAACTGC
CGGCACGTCTTCCACGTGGAGTGCGTCGACGCGTGGCTGCGCTCCAGGACCACGTGCCCG
CTCTGCCGGGCCGAGGCGGAAGTACCCAAGGCGAGGGCTTCGGCGGCGGCGACGGCGACG
GCGCAGTCGTCGTCGTCGCTCGGTGACGGAGGAATTACCGTGGTCGTGACCATACACGGC
GGCTCTGACGAAGCCGGTGGCAGGTCAACGGCGTTGACTGGTCAACCGGGATCCTCGAAC
TCTCCTAGCTGCGAGGCTGCAAGGAATTGAGGATCGACGATGACGACGAACTTCAGAGTT
GTGATGTGATTCTTTATTTTGCTATAGGAGCTCTATCAAGTGTAGATTGTGAAACGCATT
TGTGATGTGATTCTTTATTTCTTTCCCATATATAGCTAAGAAACAACTGCATAATACATT
CCCCGCAAAAGAAAAAAAAGCAAAAGTAAAGTGCTTCTGTGGTAATTGTTACGAGTTTTG
TTCCATTGAATATAGTCAAGACGATTGCATAGCAAAAAAAAA
clustalw multiple alignements is not computed in this case