These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6900#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1771 fasta sequence [GCCGAAGTCCATTGTCCACTCCATCCAAGTCGGCGCCGCTCTGAACTCTCTGGTAGTAACCCGACCGAAGCAATCCCACTGCCATCTCGGATCTCCCCACCTCCCTCCGCTCCACGCAAAGCACCCGAGTCCCCCCACCCCGACCTCCCTCCCGCTCAAAATCCCCCACCCCCGCGCGCCACGCCACCCCCTCCTCCTCGCCATCCGTCCTGCCCCCGCCGTGGCGCCGAGCTCGCATGAGGTGCACCTCCTCCCCGCGCCGTCCGCAGCAGCCATGGGAGCTCAGCAGAGCGTCAATGCGGGGAAAGCCAAGGTGGATGTGCACGTCGACCTCACCCACATGCTCTGCGAGGCGCTCCTGCTGCCGCCCATGAGGAACTCTGGCGCCACCTTCTCGCAAATCGTCGGAAGGATATCACTCAAACATCCAAGCCTATTTGGGAGGAGCGAGAAGTTAGATGTCATATTGGATAAGGGTATCAATGAATCCAATGCTGTCATTGCCTTTAGACGGCCAAGGCCTGAATGGTTATCACAACAGTCATTTGTCATTCAGCACACAATGACACCGGAAATAGCGGTGCATGGCTTTCCGGCTGACAACTTCACACGATCAGGGAGCAGAGGGATAAATCTTAGTCGATTGTCGCTTGGTGTTGAGCTTAATGAACCATCAACATCAAACTGGACATCCGGAACCAGTGTTAAATTCGAGCATATCCGGCCTGTTAATAACGAGGGACGCTCCATAGCCAGGGACCATGATGGCTTTCCTCTAACATGCAGTGGTAACCTCCATGATAACATGATTATCTTGAAGCAAGAGTCTGGTTATGCAGATGTTAATGATAATAGCTTCTTAAAAGTTAACCTCCAAATGGAACAAGGATTGCCACTTGTACCAAAATCTCTGACCTTCAACAGAGTAAAATGTGCAGTTTCGAAAGGCATGAAATTGGGGCCAACATTTTTGGTTACTAGCTTGACAGGTGGTTCCATTGTGGGGGACATGGCGCCATATCAAGCATTTGCAATAGGCGGACTTGGTAGCGTACGGGGTTATGGTGAGGGTGCAGTTGGTGCAGGAAGACTGTGCCTAATTGCTAACTGTGAATATACGGTTCC-TTTGGCAAAGCATCTGGAGGGTTCTATTTTCATGGACTGCGGCAGTGACTTAGGATCTGCTTGTCATGTCCCTGGTAATCCAGCTCTTCGACAAGGAAAACCGGGATTTGGTGTTGGATTTGGATATGGAATCCACTTTAACACAGACCTTGGTCAAATCCGAGTCGACTATGCTATGAATGCCTTCAGTCGCAAGACGATCTACTTCGGTAT-CAACAGTGGTGGCGGTTCATAGATTATGAATACAGAGGATTCACATAGCATAGAATTGGCAGTTTGGCACTCAAATTGATTCTTTGCCATAAGATGGACACAAACCCTTCTTTTTTCCATTTCAACTAGTGCTGACATAAGCCGGTGGTTCTAACTTGTGACTTCTGGCAGACCCCTAGATCAGTAGACCCAGTGGGTGTTCCAAACATGCCACCGAAATCATTTGCATGTTTGTGCCAGCATTCGGAAGCTGTACAGTTGAGATGTGTGCCTTTTGTATTTTCTCCTGTTTGGAGATTGAACAGATGGGCCATAAGATAGACATGCACGAACAGCAAACCCTGTGAGATGTGGAAATTTTGACGCTTCTCATGATCTTATTCTTTTATATAGAAATGAGAAAAATACATCATTCATGATGGTCTGTCAAAAA] [+] EMBL AK064302 [GCCGAAGTCCATTGTCCACTCCATCCAAGTCGGCGCCGCTCTGAACTCTCTGGTAGTAACCCGACCGAAGCAATCCCACTGCCATCTCGGATCTCCCCACCTCCCTCCGCTCCACGCAAAGCACCCGAGTCCCCCCACCCCGACCTCCCTCCCGCTCAAAATCCCCCACCCCCGCGCGCCACGCCACCCCCTCCTCCTCGCCATCCGTCCTGCCCCCGCCGTGGCGCCGAGCTCGCATGAGGTGCACCTCCTCCCCGCGCCGTCCGCAGCAGCCATGGGAGCTCAGCAGAGCGTCAATGCGGGGAAAGCCAAGGTGGATGTGCACGTCGACCTCACCCACATGCTCTGCGAGGCGCTCCTGCTGCCGCCCATGAGGAACTCTGGCGCCACCTTCTCGCAAATCGTCGGAAGGATATCACTCAAACATCCAAGCCTATTTGGGAGGAGCGAGAAGTTAGATGTCATATTGGATAAGGGTATCAATGAATCCAATGCTGTCATTGCCTTTAGACGGCCAAGGCCTGAATGGTTATCACAACAGTCATTTGTCATTCAGCACACAATGACACCGGAAATAGCGGTGCATGGCTTTCCGGCTGACAACTTCACACGATCAGGGAGCAGAGGGATAAATCTTAGTCGATTGTCGCTTGGTGTTGAGCTTAATGAACCATCAACATCAAACTGGACATCCGGAACCAGTGTTAAATTCGAGCATATCCGGCCTGTTAATAACGAGGGACGCTCCATAGCCAGGGACCATGATGGCTTTCCTCTAACATGCAGTGGTAACCTCCATGATAACATGATTATCTTGAAGCAAGAGTCTGGTTATGCAGATGTTAATGATAATAGCTTCTTAAAAGTTAACCTCCAAATGGAACAAGGATTGCCACTTGTACCAAAATCTCTGACCTTCAACAGAGTAAAATGTGCAGTTTCGAAAGGCATGAAATTGGGGCCAACATTTTTGGTTACTAGCTTGACAGGTGGTTCCATTGTGGGGGACATGGCGCCATATCAAGCATTTGCAATAGGCGGACTTGGTAGCGTACGGGGTTATGGTGAGGGTGCAGTTGGTGCAGGAAGACTGTGCCTAATTGCTAACTGTGAATATACGGTTCC TTTGGCAAAGCATCTGGAGGGTTCTATTTTCATGGACTGTGGCAGTGACTTAGGATCTGCTTGTCATGTCCCTGGTAATCCAGCTCTTCGACAAGGAAAACCGGGATTTGGTGTTGGATTTGGATATGGAATCCACTTTAACACAGACCTTGGTCAAATCCGAGTCGACTATGCTATGAATGCCTTCAGTCGCAAGACGATCTACTTCGGTAT CAACAGTGGTGGCGGTTCATAGATTATGAATACAGAGGATTCACATAGCATAGAATTGGCAGTTTGGCACTCAAATTGATTCTTTGCCATAAGATGGACACAAACCCTTCTTTTTTCCATTTCAACTAGTGCTGACATAAGCCGGTGGTTCTAACTTGTGACTTCTGGCAGACCCCTAGATCAGTAGACCCAGTGGGTGTTCCAAACATGCCACCGAAATCATTTGCATGTTTGTGCCAGCATTCGGAAGCTGTACAGTTGAGATGTGTGCCTTTTGTATTTTCTCCTGTTTGGAGATTGAACAGATGGGCCATAAGATAGACATGCACGAACAGCAAGCCCTGTGAGATGTGGAAATTTTGACGCTTCTCATGATCTTATTCTTTTATATAGAAATGAGAAAAA ] [+] EMBL OSS11241A [ CAGATGTTAATGATAATAGCTTCTTAAAAGTTAACCTCCAAATGGAACAAGGATTGCCACTTGTACCAAAATCTCTGACCTTCAACAGAGTAAAATGTGCAGTTTCGAAAGGCATGAAATTGGGGCCAACATTTTTGGTTACTAGCTTGACAGGTGGTTCCATTGTGGGGGACATGGCGCCATATCAAGCATTTGCAATAGGCGGACTTGGTAGCGTACGGGGTTATGGTGAGGGTGCAGTTGGTGCAGGAAGACTGTGCCTAATTGCTAACTGTGAATATACGGTTCCTTTTGGCAAAGCATCTGGAGGG TCTATTTTCATGGACTTCGGCAG ] [+] EMBL AU032601 [ AATTGCTAACTGTGAATAT CCGTTCC TTTGGCAAAGCNTCTGGAGGGTTCTATTTTCATGGACTGCGGCAGTGACTTAGGATCTGCTGGTCATGNCCCTGGTAATCCAGCTC TCGACAAGGAAAACCGGGATTTGGTGTTGGATTTGGATATGGAATCCACTTTAACACAGCCCTTGNTCAAATCCGAGTCGACTATGCTATGAATGCCTTCAGTCGCAAGNCGATCTACTTCGGTATCCAACANTGGTGGCGGTTCATAGATTATGAATACAGAGGATTCACATAGCATAGAATTGGCAGTTTGGCACTCAAATTGATTCTTTGCCATAAGATGGACACAAACCCTTCTTTTTTCCATTTCAACTAGTGCTGACATAAGCCGGTGGTTCTAACTTGTGACTTCTGGCAGACCCCTAGATCAGTAGACCCAGTGGGTGTTCCAAACATGCCACCGAAATCATTTGCATGTTTGTGCCAGCATTCGGAAGCTGTACAGTTGAGATGTGTGCCTTTTGTATTTTCTCCTGTTTGGAGATTGAACAGATGGGCCATAAGATAGACATGCACGAACAGCAAACCCTGTGAGATGTGGAAATTTTGACGCTTCTCATGATCTTATTCTTTTATATAGAAATGAGAAAAATACATCATTCATGATGGTCTGTCAAAAA] [+] EMBL AU173987 [ CAGTGGTGGCGGTTCATAGATTATGAATACAGAGGATTCACATAGCATAGAATTGGCAGTTTGGCACTCAAATTGATTCTTTGCCATAAGATGGACACAAACCCTTCTTTTTTCCATTTCAACTAGTGCTGACATAAGCCGGTGGTTCTAACTTGTGACTTNTGGCAGACCCCTAGATCAGTAGACCCAGTGGGTGTTCCAAACATGCCACCGAAATCATTTGCATGTTTGTGCCAGCATTCGGAAGCTGTACAGTTGAGATGTGTGCCTTTTGTATTTTNTCCTGTTTGGAGATTGAACAGATGGGCCATAAGATAGACATGCACGAACAGCAAACCCTGTGAGATGTGGAAATTTTGACGCTTCTCATGATCTTATTCTTTTATATAGAAATGAGAAAAATACATCATTCATGATGGTCTGTCAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||