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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6911 cluster # 6911       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6911#0 length = 655 sequences # 4  

consensusID : consensus_6911#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 655
fasta sequence
                              [ATATAGGAACATACAGTACAGAACACAATACTGGGTAAGTATACACTGGATTATTCCGTATTCGTTGGATATGATACTCCAAACAGGAGATGCTTTTTAGCCTTCCCACTAGCCTGCACCAAGTGGCTTGGCAAACAAACAATAGGTGATGCTGACACCTTTCGATGGCATCAGCACAAGTGCACAACACATGTTGAGTTTTGAGATTGTCTACCTCATCCATTTCTTTCTTGGGAGCCTGTTCAACTCATTATAGATGCATTGCATGTATATATGTCTGATTAAAAAGGCCTGAGCCTGCAGTTCCGTGCTTTTCCACCACGGCACAGCTTGCCAGGTTGAAGCAGTATATAGTTAT-AAATT-GT-CTTCTTTTGTCACTAT-CA-GGGAGGTT-GGGTTGAGAGGGAGATGCTTTGTCAATTTGGTTGTATAAGTTGCATCGTAGGCACAGTTGAGCCCACATCTTGCTTAGGAACAGTTCGCCTCCATTTGGCTTTGCATACTATAGTTGTCTTCCATTTAGTTTTCAGCCAGCATAGGATTTCAGATTTCTTCTAATTTTGCCTTTCCTGCCTGGATTGTATATATTGATTTATATATATCTTGACGACCTGCCTCTCATCGTTGGTGCAGAGGCCGAATTCCATTATCCAAAAAA]

[+] EMBL AK063889             [ATATAGGAACATACAGTACAGAACACAATACTGGGTAAGTATACACTGGATTATTCCGTATTCGTTGGATATGATACTCCAAACAGGAGATGCTTTTTAGCCTTCCCACTAGCCTGCACCAAGTGGCTTGGCAAACAAACAATAGGTGATGCTGACACCTTTCGATGGCATCAGCACAAGTGCACAACACATGTTGAGTTTTGAGATTGTCTACCTCATCCATTTCTTTCTTGGGAGCCTGTTCAACTCATTATAGATGCATTGCATGTATATATGTCTGATTAAAAAGGCCTGAGCCTGCAGTTCCGTGCTTTTCCACCACGGCACAGCTTGCCAGGTTGAAGCAGTATATAGTTAT AAATT GT CTTCTTTTGTCACTAT CA GGGAGGTT GGGTTGAGAGGGAGATGCTTTGTCAATTTGGTTGTATAAGTTGCATCGTAGGCACAGTTGAGCCCACATCTTGCTTAGGAACAGTTCGCCTCCATTTGGCTTTGCATACTATAGTTGTCTTCCATTTAGTTTTCAGCCAGCATAGGATTTCAGATTTCTTCTAATTTTGCCTTTCCTGCCTGGATTGTATATATTGATTTATATATATCTTGACGACCTGCCTCTCATCGTTGGTGCAGAGGCCGAAT                ]
[+] EMBL AU174305             [                                                                                                                                                                                                                         ATCCATTTCTTTCTTGGGAGCCTGTTCAACTCATTATAGATGCATTGCATGTATATATGTCTGATTAAAAAGGCCTGAGCCTGCAGTTCCGTGCTTTTCCACCACGGCACAGCTTGCCAGGTTGAAGCAGTATATAGTTAT AAATT GT CTTCTTTTGTCACTAT CA GGGAGGTT GGGTTGAGAGGGAGATGCTTTGTCAATTTGGTTGTATAAGTTGCATCGTAGGCACAGTTGAGCCCACATCTTGCTTAGGAACAGTTCGCCTCCATTTGGCTTTGCATACTATAGTTGTCTTCCATTTAGTTTTCAGCCAGCATAGGATTTCAGATTTCTTCTAATTTTGCCTTTCCTGCCTGGATTGTATATATTGATTTATATATATCTTGACGACCTGCCTCTCATCGTTGGTGCAGAGGCCGAATTCCATTATCCAAAAAA]
[+] EMBL AU223137             [                                                                                                                                                                                                                                TCTTTCTTGGGAGCCTGTTCAACTCATTATAGATGCATTGCATGTATATATGTCTGATTAAAAAGGCCTGAGCCTGCAGTTCCGTGCTTTTCCACCACGGCACAGCTTGCCAGGTTGAAGCAGTATATAGTTAT AAATT GT CTTCTTTTGTCACTAT CA GGGAGGTT GGGTTGAGAGGGANATGCTTTGTCAATTTGGTTGTATAAGTTGCATCGTAGGCACAGTTGAGCCCACATCTTGCTTAGGAACAGTTCGCCTCCATTTGGCTTTGCATACTATAGTTGTCTTCCATTTAGTTTTCAGCCAGCATAGGATTTCAGATTTCTTCTAATTTTGCCTTTCCTGCCTGGATTGTATATATTGATTTATATATATCTTGACGACCTGCCTCTCATCGTTGGTGCAGAGGCCGAATTCCATTATCCAAAAAA]
[+] EMBL AU033119             [                                                                                                                                                                                                                                                                                                                                                                   TATAAAATTGGTCCTTCTTTGGCCACTATCCAGGGGAGNTTGGGGTTGAGAGGGAGATGCTTTGTCAATTTGGTTGTATAAGTTGCATCGTAGGCACAGTTGAGCCCACATCTTGCTTAGGAACAGTTCGCCTCCATTTGGCTTTGCATACTATAGTTGTCTTCCATTTAGTTTTCAGCCAGCATAGGATTTCAGATTTCTTCTAATTTTGCCTTTCCTGCCTGGATTGTATATATTGATTTATATATATCTTGACGACCTGCCTCTCATCGTTGGTGCAGAGGCCGAATTCCATTATCCAAAAAA]


>consensus_6911#0 ATATAGGAACATACAGTACAGAACACAATACTGGGTAAGTATACACTGGATTATTCCGTA TTCGTTGGATATGATACTCCAAACAGGAGATGCTTTTTAGCCTTCCCACTAGCCTGCACC AAGTGGCTTGGCAAACAAACAATAGGTGATGCTGACACCTTTCGATGGCATCAGCACAAG TGCACAACACATGTTGAGTTTTGAGATTGTCTACCTCATCCATTTCTTTCTTGGGAGCCT GTTCAACTCATTATAGATGCATTGCATGTATATATGTCTGATTAAAAAGGCCTGAGCCTG CAGTTCCGTGCTTTTCCACCACGGCACAGCTTGCCAGGTTGAAGCAGTATATAGTTATAA ATTGTCTTCTTTTGTCACTATCAGGGAGGTTGGGTTGAGAGGGAGATGCTTTGTCAATTT GGTTGTATAAGTTGCATCGTAGGCACAGTTGAGCCCACATCTTGCTTAGGAACAGTTCGC CTCCATTTGGCTTTGCATACTATAGTTGTCTTCCATTTAGTTTTCAGCCAGCATAGGATT TCAGATTTCTTCTAATTTTGCCTTTCCTGCCTGGATTGTATATATTGATTTATATATATC TTGACGACCTGCCTCTCATCGTTGGTGCAGAGGCCGAATTCCATTATCCAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)