cluster # 6923

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Oryza sativa
cluster # 6923 cluster # 6923 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6923#0 length = 734 sequences # 4

consensusID : consensus_6923#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 734
fasta sequence

                              [TCTCGAGTTTTTTTTTTTTTTTTTTTTTTTGGCAAATAGTAGCATGAATATATAGTGTCTCATGTATCTGTAATATCAGAAAACGAGAGCACATATATAAGTAGCACCAAGGCACATACATCATCTGCTTACATTCTTATTATTCCAGAATTTTCAGAGACTCATTAATTCACTCACTCACTCACACACACACACACACACCACAGCAATAGTATTTTCTGAAAACCCAACCCCAAGATCCAACACAAAGACACGCCCACAGAACTAATTAACACATGATCTAAACCACCACTGACACACCATCACTCTCACTGATCACAAACATGAAACTGAAACTGAACTGAAACCATCACCAACACACACAACAGATTAGCTAAAACGAGATAGCCCCCTCCTCCTCCTCCAAAAACGGATTTAGATGGAGAGAGGGAGACCTGGAAGAAAGGCTTAGCCTTCCCTTGCCGATAAGACTTGCCTTCTTTCTTCTTCTGCCGCCGCCGCCGCCTGCTCGCTCGCCGACCACCGCTGGAAGCCATGGCAGCAAGCATGCTAAGCTTCGTCCCGACCTGCAGCTCGCACTCACAACACTTCACACCTCTGAAAGTGCGATAGCTTGGCACCTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGACATCGTTCGCGAGGAAGCTCCCGGGCTATTCAGATGGGGACAGGTGTTAGAGCATTAATTGATCTCTTTTCTACTC]

[+] EMBL CA754591             [TCTCGAGTTTTTTTTTTTTTTTTTTTTTTTGGCAAATAGTAGCATGAATATATAGTGTCTCATGTATCTGTAATATCAGAAAACGAGAGCACATATATAAGTAGCACCAAGGCACATACATCATCTGCTTACATTCTTATTATTCCAGAATTTTCAGAGACTCATTAATTCACTCACTCACTCACACACACACACACACACCACAGCAATAGTATTTTCTGAAAACCCAACCCCAAGATCCAACACAAAGACACGCCCACAGAACTAATTAACACATGATCTAAACCACCACTGACACACCATCACTCTCACTGATCACAAACATGAAACTGAAACTGAACTGAAACCATCACCAACACACACAACAGATTAGCTAAAACGAGATAGCCCCCTCCTCCTCCTCCAAAAACGGATTTAGATGGAGAGAGGGAGACCTGGAAGAAAGGCTTAGCCTTCCCTTGCCGATAAGACTTGCCTTCTTTCTTCTTCTGCCGCCGCCGCCGCCTGCTCGCTCGCCGACCACCGGTGGAAGCCATGGCAGCAAGCATGCTAAGCTTCGTCCCGACCTGCAGCTCGCACTCACAACACTTCACACCTCTGAAAGTGCGATAGCTTGGCACCTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTNGACATCGTTCGCGAGGAAGCTCCCGGGCTATTCAGATGGGGACAGGTGT                             ]
[+] EMBL BE607450             [                                                                                                                CACATACATCATCTGCTTACATTCTTATTATTCCAGAATTTTCAGAGACTCATTAATTCACTCACTCACTCACACACACACACACACACCACAGCAATAGTATTTTCTGAAAACCCAACCCCAAGATCCAACACAAAGACACGCCCACAGAACTAATTAACACATGATCTAAACCACCACTGACACACCATCACTCTCACTGATCACAAACATGAAACTGAAACTGAACTGAAACCATCACCAACACACACAACAGATTAGCTAAAACGAGATAGCCCCCTCCTCCTCCTCCAAAAACGGATTTAGATGGAGAGAGGGAGACCTGGAAGAAAGGCTTAGCCTTCCCTTGCCGATAAGACTTGCCTTCTTTCTTCTTCTGCCGCCGCCGCCGTCTGCTCGCTCGCCGACCACCGCTGGAAGC                                                                                                                                                                                                         ]
[-] EMBL CF291210             [                                                                                                                                                                                                                                                    ACAAAGACACGCCCACAGAACTAATTAACACATGATNTAAACCACCACTGACACACCATCACTCTCACTGATCACAAACATGAAACTGAAACTGAACTGAAACCATCACCAACACACACAACAGATTAGCTAAAACGAGATAGCCCCCTCCTCCTCCTCCAAAAACGGATTTAGATGGAGAGAGGGAGACCTGGAAGAAAGGCTTAGCCTTCCCTTGCCGATAAGACTTGCCTTCTTTCTTCTTCTGCCGCCGCCGCCGCCTGCTCGCTCGCCGACCACCGCTGGAAGCCATGGCAGCAAGCATGCTAAGCTTCGTCCCGACCTGCAGCTCGCACTCACAACACTTCACACCTCTGAAAGTGCGATAGCTTGGCACCTCTTNTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGACATCGTTCGCGAGGAAGCTCCCGGGCTATTCAGATGGGGACAGGTGTTAGAGCATTAATTGATCTCTTTTCTACTC]
[-] EMBL AU033295             [                                                                                                                                                                                                                                                                                                                                               CTGAACTGAAACCATAACCAACACACACAACAGATTAGCTAAAACGAGATAGCCCCCTCCTCCTCCTCCAAAAACGGATTTAGATGGAGAGAGGGAGACCTGGAAGAAAGGCTTAGCCTTCCCTTGCCGATAAGACTTGCCTTCTTTCTTCTTCTGCCGCCGCCGCCGCCTGCTNGCTCGCCGACCACCGCTGGAAGCCATGGCAGNAAGCATGCTAAGCTTCGTCCCGACCTGCAGNTCGNACTNACAACACTTCACACCTCTGAAAGTGCGATAGCTTGGCACCTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGACATNGTTCGCGAGGAAGCTCCCGGGCTATTCAGATGGGGACAGGTGTTAG                          ]




>consensus_6923#0
TCTCGAGTTTTTTTTTTTTTTTTTTTTTTTGGCAAATAGTAGCATGAATATATAGTGTCT
CATGTATCTGTAATATCAGAAAACGAGAGCACATATATAAGTAGCACCAAGGCACATACA
TCATCTGCTTACATTCTTATTATTCCAGAATTTTCAGAGACTCATTAATTCACTCACTCA
CTCACACACACACACACACACCACAGCAATAGTATTTTCTGAAAACCCAACCCCAAGATC
CAACACAAAGACACGCCCACAGAACTAATTAACACATGATCTAAACCACCACTGACACAC
CATCACTCTCACTGATCACAAACATGAAACTGAAACTGAACTGAAACCATCACCAACACA
CACAACAGATTAGCTAAAACGAGATAGCCCCCTCCTCCTCCTCCAAAAACGGATTTAGAT
GGAGAGAGGGAGACCTGGAAGAAAGGCTTAGCCTTCCCTTGCCGATAAGACTTGCCTTCT
TTCTTCTTCTGCCGCCGCCGCCGCCTGCTCGCTCGCCGACCACCGCTGGAAGCCATGGCA
GCAAGCATGCTAAGCTTCGTCCCGACCTGCAGCTCGCACTCACAACACTTCACACCTCTG
AAAGTGCGATAGCTTGGCACCTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGACA
TCGTTCGCGAGGAAGCTCCCGGGCTATTCAGATGGGGACAGGTGTTAGAGCATTAATTGA
TCTCTTTTCTACTC

clustalw multiple alignements is not computed in this case