cluster # 6936

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Oryza sativa
cluster # 6936 cluster # 6936 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6936#0 length = 1151 sequences # 4
consensusID : consensus_6936#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1151
fasta sequence
                              [CCGAGGGAGGGGAAGAGGGAACGGAGTCTATCGTGCGGTGCGGTTCTCCGCTCGCCACGACGACGACGAGCCCCATGCCTCCTCCGCCCCATCGCGGCGGCGGCGGCGGCCGCGACACGAGCGCGTTCTTCGCGGCGACGCTGGTGCTGTGGGCGGTGTCGGTGGGGTTCGAGATCGGCGCGCGCGGGCGGCGGGAGCTGGCGCCCGTGGCCGCAGGGTTTGCCTTCTTCCAGGCCGCCAGCGCCGCCGTGCGCGCCGCCGTCTCCCGCGACCCGCTCTTCGTCAACACCGCCGTTTCGCTCCTGCACTCCTCGCTCACGTCGGCCTCCGTTATCTTTGTTCTTGTCAACCGATGGCATAATAAGGACCTCAAGAACATGTTTGAGCATGAAGAATTGTTTGGTGGCAGTTGGGTTGGAGCATATTCTGCTCTGTGCTTTTCTTGTGGCTATTTTGCTTATGATCAATTAGATATGCTTCGTTACCGACTGTACAGTGGACGGATTCCTGGAATTCTCATGCACCACCTGATTCTGCTCATTTGCTTTACACTAGCTCTGTATCGGAATGTGACGATCAACTACCTAATTCTAACTCTTGTATGCGAGCTGCACTCCGTATTTTTGCACATAAGGAAATTGAGGCGAATGGCTGGATTTCGGGATTACAACAGAAAAATTGTGAAACTGGAATGGGTCCTCAACT-GGACTACATTTGT-ATCAGCAAGGGTGGCATGCCACATACTGATTACATACAAACTGATCATTGATGCCCACAAGTTTGATAGTGGAATTGAGCTTCCACTAGCTCTTTTTGGCATGGCAGGAATGAATCTGCTCAACATATTTTTAGGACTTGATCTATTAAAAGCTTACACGCTCGAGAGAAATCAGCAGACACATCAGGACTGAG-TGTGCCTCTACTGATGTGGTACTCCAAAAGTTTTGGCAAGTTGTAGTCAAACAACAATTAATATAGATCAGCAGACAGAGGTATGTCAATGTGTTATTGGCCTCTACGTTCGGTAGAAACTAGTAATGATGTACTATATTATGTGTTCTGAACTCATTATAAGATCTCTACCAGCAAATGATTCTTTGCTATTGTGCTACTATTTGTATATTGCGTTTCATTTATCATCATATGCAGAC]

[+] EMBL AK070678             [CCGAGGGAGGGGAAGAGGGAACGGAGTCTATCGTGCGGTGCGGTTCTCCGCTCGCCACGACGACGACGAGCCCCATGCCTCCTCCGCCCCATCGCGGCGGCGGCGGCGGCCGCGACACGAGCGCGTTCTTCGCGGCGACGCTGGTGCTGTGGGCGGTGTCGGTGGGGTTCGAGATCGGCGCGCGCGGGCGGCGGGAGCTGGCGCCCGTGGCCGCAGGGTTTGCCTTCTTCCAGGCCGCCAGCGCCGCCGTGCGCGCCGCCGTCTCCCGCGACCCGCTCTTCGTCAACACCGCCGTTTCGCTCCTGCACTCCTCGCTCACGTCGGCCTCCGTTATCTTTGTTCTTGTCAACCGATGGCATAATAAGGACCTCAAGAACATGTTTGAGCATGAAGAATTGTTTGGTGGCAGTTGGGTTGGAGCATATTCTGCTCTGTGCTTTTCTTGTGGCTATTTTGCTTATGATCAATTAGATATGCTTCGTTACCGACTGTACAGTGGACGGATTCCTGGAATTCTCATGCACCACCTGATTCTGCTCATTTGCTTTACACTAGCTCTGTATCGGAATGTGACGATCAACTACCTAATTCTAACTCTTGTATGCGAGCTGCACTCCGTATTTTTGCACATAAGGAAATTGAGGCGAATGGCTGGATTTCGGGATTACAACAGAAAAATTGTGAAACTGGAATGGGTCCTCAACT GGACTACATTTGT ATCAGCAAGGGTGGCATGCCACATACTGATTACATACAAACTGATCATTGATGCCCACAAGTTTGATAGTGGAATTGAGCTTCCACTAGCTCTTTTTGGCATGGCAGGAATGAATCTGCTCAACATATTTTTAGGACTTGATCTATTAAAAGCTTACACGCTCGAGAGAAATCAGCAGACACATCAGGACTGAG TGTGCCTCTACTGATGTGGTACTCCAAAAGTTTTGGCAAGTTGTAGTCAAACAACAATTAATATAGATCAGCAGACAGAGGTATGTCAATGTGTTATTGGCCTCTACGTTCGGTAGAAACTAGTAATGATGTACTATATTATGTGTTCTGAACTCATTATAAGATCTCTACCAGCAAATGATTCTTTG                                                   ]
[+] EMBL AK060596             [ CGAGGGAGGGGAAGAGGGAACGGAGTCTATCGTGCGGTGCGGTTCTCCGCTCGCCACGACGACGACGAGCCCCATGCCTCCTCCGCCCCATCGCGGCGGCGGCGGCGGCCGCGACACGAGCGCGTTCTTCGCGGCGACGCTGGTGCTGTGGGCGGTGTCGGTGGGGTTCGAGATCGGCGCGCGCGGGCGGCGGGAGCTGGCGCCCGTGGCCGCAGGGTTTGCCTTCTTCCAGGCCGCCAGCGCCGCCGTGCGCGCCGCCGTCTCCCGCGACCCGCTCTTCGTCAACACCGCCGTTTCGCTCCTGCACTCCTCGCTCACGTCGGCCTCCGTTATCTTTGTTCTTGTCAACCGATGGCATAATAAGGACCTCAAGAACATGTTTGAGCATGAAGAATTGTTTGGTGGCAGTTGGGTTGGAGCATATTCTGCTCTGTGCTTTTCTTGTGGCTATTTTGCTTATGATCAATTAGATATGCTTCGTTACCGACTGTACAGTGGACGGATTCCTGGAATTCTCATGCACCACCTGATTCTGCTCATTTGCTTTACACTAGCTCTGTATCGGAATGTGACGATCAACTACCTAATTCTAACTCTTGTATGCGAGCTGCACTCCGTATTTTTGCACATAAGGAAATTGAGGCGAATGGCTGGATTTCGGGATTACAACAGAAAAATTGTGAAACTGGAATGGGTCCTCAACT GGACTACATTTGT ATCAGCAAGGGTGGCATGCCACATACTGATTACATACAAACTGATCATTGATGCCCACAAGTTTGATAGTGGAATTGAGCTTCCACTAGCTCTTTTTGGCATGGCAGGAATGAATCTGCTCAACATATTTTTAGGACTTGATCTATTAAAAGCTTACACGCTCGAGAGAAATCAGCAGACACATCAGGACTGAG TGTGCCTCTACTGATGTGGTACTCCAAAAGTTTTGGCAAGTTGTAGTCAAACAACAATTAATATAGATCAGCAGACAGAGGTATGTCAATGTGTTATTGGCCTCTACGTTCGGTAGAAACTAGTAATGATGTACTATATTATGTGTTCTGAACTCATTATAAGATCTCTACCAGCAAATGATTCTTTGCTATTGTGC                                          ]
[-] EMBL AU093251             [                                                                                                                           CGTTCTTCGCGGCGACGCTGGTGCTGTGGGCGGTGTCGGTGGGGTTCGAGATCGGCGCGCGCGGGCGGCGGGAGCTGGCGCCCGTGGCCGCA GGTTTGCCTTCTTCCAGGCCGCCAGCGCCGCCGTGCGCGCCGCCGTCTCCCGCGACCCGCTCTTCGTCAACACCGCCGTTTCGCTCCTGCACTCCTCGCTCACGTCGGCCTCCGTTATCTTTGTTCTTGTCAACCGATGGCATAATAAGGACCTCAAGAACATGTTTGAGCATGAAGAATTGTTTGGTGGCAGTTGGGTTGGAGCATATTCTGCTCTGTGCTTTTCTTGTGGCTA TTTGCTTATGATCAATTAGATATGCTTCGTTACCGACTGTACA TGGACGGATTCCTGGAA TCTCATGCACCACCTGATTCTGCTCA TTGCTTTACACTAGCTCTGTATCGGAATGTGACGATCAACTACCTAATTCTAACTCTTGTATGCGAGCTGCACTCCGTATTTTTGCACATAAGGAAATTGAGGCGAATGGCTGGATTTCGGGATTACAACAGAAAAATTGTGAAA TGGAATGGGTCCTCAACTGGGACTACA TTGTAATCAGCAANGGTGGCA GCCACATACTGATTACATACAAACTGATCATTGAAGCCCACAAATTTGATAGTGGGAATGAGCTTCCACTAGTCCTTTTGGGCA GGCAGGA                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AU062876             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    cnATCAGGACNGAGTTGTGCCTCTACTGATGTGGTACTCCAAAAGTTTTGGCAAGTTGTAGTCAAACAACAATTAATATAGATCAGCAGACAGAGGTATGTCAATGTGTTATTGGCCTCTACGTTCGGTAGAAACTAGTAATGATGTACTATATTATGTGTTCTGAACTCATTATAAGATCTCTACCAGCAAATGATTCTTTGCTATTGTGCTACTATTTGTATATTGCGTTTCATTTATCATCATATGCAGAC]




>consensus_6936#0
CCGAGGGAGGGGAAGAGGGAACGGAGTCTATCGTGCGGTGCGGTTCTCCGCTCGCCACGA
CGACGACGAGCCCCATGCCTCCTCCGCCCCATCGCGGCGGCGGCGGCGGCCGCGACACGA
GCGCGTTCTTCGCGGCGACGCTGGTGCTGTGGGCGGTGTCGGTGGGGTTCGAGATCGGCG
CGCGCGGGCGGCGGGAGCTGGCGCCCGTGGCCGCAGGGTTTGCCTTCTTCCAGGCCGCCA
GCGCCGCCGTGCGCGCCGCCGTCTCCCGCGACCCGCTCTTCGTCAACACCGCCGTTTCGC
TCCTGCACTCCTCGCTCACGTCGGCCTCCGTTATCTTTGTTCTTGTCAACCGATGGCATA
ATAAGGACCTCAAGAACATGTTTGAGCATGAAGAATTGTTTGGTGGCAGTTGGGTTGGAG
CATATTCTGCTCTGTGCTTTTCTTGTGGCTATTTTGCTTATGATCAATTAGATATGCTTC
GTTACCGACTGTACAGTGGACGGATTCCTGGAATTCTCATGCACCACCTGATTCTGCTCA
TTTGCTTTACACTAGCTCTGTATCGGAATGTGACGATCAACTACCTAATTCTAACTCTTG
TATGCGAGCTGCACTCCGTATTTTTGCACATAAGGAAATTGAGGCGAATGGCTGGATTTC
GGGATTACAACAGAAAAATTGTGAAACTGGAATGGGTCCTCAACTGGACTACATTTGTAT
CAGCAAGGGTGGCATGCCACATACTGATTACATACAAACTGATCATTGATGCCCACAAGT
TTGATAGTGGAATTGAGCTTCCACTAGCTCTTTTTGGCATGGCAGGAATGAATCTGCTCA
ACATATTTTTAGGACTTGATCTATTAAAAGCTTACACGCTCGAGAGAAATCAGCAGACAC
ATCAGGACTGAGTGTGCCTCTACTGATGTGGTACTCCAAAAGTTTTGGCAAGTTGTAGTC
AAACAACAATTAATATAGATCAGCAGACAGAGGTATGTCAATGTGTTATTGGCCTCTACG
TTCGGTAGAAACTAGTAATGATGTACTATATTATGTGTTCTGAACTCATTATAAGATCTC
TACCAGCAAATGATTCTTTGCTATTGTGCTACTATTTGTATATTGCGTTTCATTTATCAT
CATATGCAGAC
clustalw multiple alignements is not computed in this case