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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6938#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1928 fasta sequence
[ATATCATCCATAATCCTTCAAGCTCTTGTTGGCTTTGCTTAATTGCAGCTGCCACTAGCTTTGTTAGGATCAATCACATCCATCTACGTGTGTAGAGCGTCGTGACAGAGAGTTTTGTGATGGAGCAGCTTCCCAAGCGCCCGGCGAACTACGTGCCACTGAGCCCTGTGGGGTTCCTGCCGCGCGCCAATGCCGTCTACGGCGACCGCACCTCCGTCATCTACGGCCGCGTCCGCTTCACCTGGAGCCAGACCTACGCCCGCTGCCGCCGCCTCGCCTCCTCCCTCCTCTCCCTCGGCGTCCGCAACCACGACGTCGTGTCGGTTTTGGCGCCGAACGTGCCGGCAATGTACGAGATGCACTTCGCGGTGCCGATGGCCGGGGCGGTGCTCAACACCATCAACACGCGGCTCGACGCGAGGGCGGTGGCGGGCATCCTGCGGCACTCCGAGGCCAAGGTGTTCTTCGTCGACTACCAGTACGTGCGCCTCGCCAGCGACGCGCTCCAGATCGTCGCCGACGAGGGGAGGCACGTCCCGCTCGTCGCCGTCATCGACGACATTGACGTGCCCACCGGCGTCCGCCTCGGCGAGCTCGAGTACGAGGGGCTGGTCGCCCGTGGC-AC-C-CGGCCGCCGAGCTGCCCAGCCTCGCCGACGAGTGGGACGCCGTCACGCTCAACTACACGTCGGGCACCACGTCGGCGCCCAAGGGCGTGGTGTACAGCCACCGCGGCGCGTACCTGAGCACCATGAGCTTGCTCATGT-CGTGGGTCGTCGGCGACGAGCC-GGTGTACCTGCGGACGCTGCCCATGTTCCACTGCAACGGGTGGACCTTCACCTGGGGCATGGCAGCGCGCGGCGGCGTCAACGTCTGCATCCGCGACGCGCGCGCCGCGGACATCTACCGCGCCATCGCG-GCCACGGCGTCACCCACCTGTGCTGCGCGCCGGTGGTGTTCAACATCCTGCTCGAGGGCGGCGAGGCGGCGGCGAAGCAGCTCGCGGCCCCGGTCCACGTGCTCACCGGCGGGGCGCCACCGCCGGCCGCCCTCCTCGAGCGCGTCGAGCGGATCGGCTTCCGCGTGACGCACGCGTACGGGCTCACCGAGGCCACCGGCCCGGCGCTGGCGTGCGAGTGGCGCGCGCAGTGGGACCGCCTGCCGCTGCCGGAGCGCGCGCGGCTCAAGTCCCGGCAGGGCGTCAGCGTCCTGTCCCTCGCCGACGCCGACGTCAAGGACGCCAAGACGATGGCGAGAGTGCCGCGCGACGGCAAGACCGTCGGCGAGATCGTGCTCCGCGGCAGCAGCATCATGAAGGGCTACCTCAACAACCCGGAGGCGAACAGCGACGCCTTCAAGGGCGAGTGGTTCCTGACCGGCGACGTCGGCGTCGTGCACGCCGACGGCTACATCGAGATCAAGGACAGGTCCAAGGACGTGATCATCAGCGGCGGCGAGAACATCTGCAGCAAGGAGGTGGAGGAGGTGCTGTTCCAGCACCCCGCCGTCGCCGACGCGGCGGTGGTCGCCATGCCGCACCCGCACTGGGGCGAGACGCCGTGCGCGTTCGTCGTGGCGAGGGACAAGGCGGCCGGGGTGTGCGAGGACGACGTCGTCGCGTTCTGCCGCAAGCACATGGCGCGGTTCATGGTGCCCAAGAAGGTGGTCGTCTACGACGCCATCCCGAGGAACGGCAACGGCAAGGTCGAGAAGAACTTGCTCCGGGAGGCGGCCAAGAAGCTGGCGCCGGCGGCCGTGCCGGCGCAGAAGACGAAGGTGAAGACGACGACGACGACGGTCGGCGGCCGCCGCGGCGAGCACCCGGTGGCGCATGTCATGGCCGTGTCAAGGCTTTAGGGCAATCACCAAAATGTCACCAATCTTTATCGGTGAACCGGTGATATCACCTTTTGCACGTAGGAATTTGGCAC]
[+] EMBL AK110783 [ATATCATCCATAATCCTTCAAGCTCTTGTTGGCTTTGCTTAATTGCAGCTGCCACTAGCTTTGTTAGGATCAATCACATCCATCTACGTGTGTAGAGCGTCGTGACAGAGAGTTTTGTGATGGAGCAGCTTCCCAAGCGCCCGGCGAACTACGTGCCACTGAGCCCTGTGGGGTTCCTGCCGCGCGCCAATGCCGTCTACGGCGACCGCACCTCCGTCATCTACGGCCGCGTCCGCTTCACCTGGAGCCAGACCTACGCCCGCTGCCGCCGCCTCGCCTCCTCCCTCCTCTCCCTCGGCGTCCGCAACCACGACGTCGTGTCGGTTTTGGCGCCGAACGTGCCGGCAATGTACGAGATGCACTTCGCGGTGCCGATGGCCGGGGCGGTGCTCAACACCATCAACACGCGGCTCGACGCGAGGGCGGTGGCGGGCATCCTGCGGCACTCCGAGGCCAAGGTGTTCTTCGTCGACTACCAGTACGTGCGCCTCGCCAGCGACGCGCTCCAGATCGTCGCCGACGAGGGGAGGCACGTCCCGCTCGTCGCCGTCATCGACGACATTGACGTGCCCACCGGCGTCCGCCTCGGCGAGCTCGAGTACGAGGGGCTGGTCGCCCGTGGCGAC C CCGCCGCCGAGCTGCCCAGCCTCGCCGACGAGTGGGACGCCGTCACGCTCAACTACACGTCGGGCACCACGTCGGCGCCCAAGGGCGTGGTGTACAGCCACCGCGGCGCGTACCTGAGCACCATGAGCTTGCTCATGT CGTGGGTCGTCGGCGACGAGCC GGTGTACCTGTGGACGCTGCCCATGTTCCACTGCAACGGGTGGACCTTCACCTGGGGCATGGCAGCGCGCGGCGGCGTCAACGTCTGCATCCGCGACGCGCGCGCCGCGGACATCTACCGCGCCATCGCGCGCCACGGCGTCACCCACCTGTGCTGCGCGCCGGTGGTGTTCAACATCCTGCTCGAGGGCGGCGAGGCGGCGGCGAAGCAGCTCGCGGCCCCGGTCCACGTGCTCACCGGCGGGGCGCCACCGCCGGCCGCCCTCCTCGAGCGCGTCGAGCGGATCGGCTTCCGCGTGACGCACGCGTACGGGCTCACCGAGGCCACCGGCCCGGCGCTGGCGTGCGAGTGGCGCGCGCAGTGGGACCGCCTGCCGCTGCCGGAGCGCGCGCGGCTCAAGTCCCGGCAGGGCGTCAGCGTCCTGTCCCTCGCCGACGCCGACGTCAAGGACGCCAAGACGATGGCGAGAGTGCCGCGCGACGGCAAGACCGTCGGCGAGATCGTGCTCCGCGGCAGCAGCATCATGAAGGGCTACCTCAACAACCCGGAGGCGAACAGCGACGCCTTCAAGGGCGAGTGGTTCCTGACCGGCGACGTCGGCGTCGTGCACGCCGACGGCTACATCGAGATCAAGGACAGGTCCAAGGACGTGATCATCAGCGGCGGCGAGAACATCTGCAGCAAGGAGGTGGAGGAGGTGCTGTTCCAGCACCCCGCCGTCGCCGACGCGGCGGTGGTCGCCATGCCGCACCCGCACTGGGGCGAGACGCCGTGCGCGTTCGTCGTGGCGAGGGACAAGGCGGCCGGGGTGTGCGAGGACGACGTCGTCGCGTTCTGCCGCAAGCACATGGCGCGGTTCATGGTGCCCAAGAAGGTGGTCGTCTACGACGCCATCCCGAGGAACGGCAACGGCAAGGTCGAGAAGAACTTGCTCCGGGAGGCGGCCAAGAAGCTGGCGCCGGCGGCCGTGCCGGCGCAGAAGACGAAGGTGAAGACGACGACGACGACGGTCGGCGGCCGCCGCGGCGAGCACCCGGTGGCGCATGTCATGGCCGTGTCAAGGCTTTAGGGCAATCACCAAAATGTCACCAATCTTTATCGGTGAACCGGTGATATCACCTTTTGCACGTAGGAATTTGGCAC]
[+] EMBL AU070350 [ GCTCGAGTACGAGGGGCTGGTCGCCCGTGGC AC CGCGGCCGCCGAGCTGCCCAGCCTCGCCGACGAGTGGGACGCCGTCACGCTCAACTACACGTCGGGCACCACGTCGGCGCCCAAGGGCGTGGTGTACAGCCACCGCGGCGCGTACCTGAGCACCATGAGCTTGCTCATGT CGTGGGTCGTCGGCGACGAGCC GGTGTACCTGCGGACGCTGCCCATGTTCCACTGCAACGGGTGGACCTTCACCTGGGGCATGGCAGCGCGCGGCGGCGTCAACGTCTGCATCCGCGACGCGCGCGCCGCGAACATCTACCGNGCCATCACG GCCACGGCGTCANCCACCTGTGCTGCACGCCGGTGG ]
[+] EMBL AU070346 [ GCTCGAGTACGAGGGGCTGGTCGCCCGTGGC ACNC CGGCCGCCGAGCTGCCCAGCCTCGCCGACGAGTGGGACGCCGTCACGCTCAACTACACGTCGGGCACCACGTCGGCGCCCAAGGGCGTGGTGTACAGCCACCGCGGCGCGTACCTGAGCACCATGAGCTTGCTCATGT CGTGGGTCGTCGGCGACGAGCC GGTGTACCTGCGGACGCTGCCCATGTTCCACTGCAACGGGTGGACCTTCACCTGGGGCATGGCAGCGCGCGGCGGCGTCAACGTCTGCATCCGCGACGCGCGCGCCGC GACATCTACCGCGCCATCGCG GCCACGGCGTCACC ]
[+] EMBL OSS12256A [ GCTCGAGTACGAGGGGCTGGTCGCCCGTGGC CN C NGNCCGCCGAGCTGCCCAGCCTCGCCGACGAGTGGGACGCCGTCACGCTCAACTACACGTCGGGCACCACGTCGGCGCCCAAGGGCGTGGTGTACAGCCACCGCGGCGCGTACCTNAGCACCATGAGCTTGCTCATGTCCGTGGGTCGTCGGCGACGAGCCNGTTGTACCTGCGGACGCTGCCCATGTTCCACTGCAACGGGTGGACCTTCACCTGGGGCATGGCAGCCCGCGGCGGCGTCAACGTCTTCATCCGCNACG GCGCTCCG GGACATNTACC ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||