cluster # 6942

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Oryza sativa
cluster # 6942 cluster # 6942 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6942#0 length = 2187 sequences # 4
consensusID : consensus_6942#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2187
fasta sequence
                              [CTCCACCGCGCGCCGAATCCTACTCCCGTCGCCTCTCCGCGTCCCGGCCCGCGCCATCGAGTCCTCCCCCGGCACCACAAAGCAGGAGCCGACTCCGGCTGCCGGTGAGGGTGAGGCCCAGGAGCCGCCGCCCCCCGCTGCGTCGGCGTTCGAGGTGGAGGAGCTCGGGTGGGGGACCCAGCTCGCCGTGAAGCTACGCATGCTCGTGGCCCCGCCATGGAAGCGCGTCCGCAAGGGCAGCGTCCTTAACATGAAGCTTCGGGGCGAGATATCCGATCAGTTGAAGACACGCTTCTCTTCCGGGCTGTCATTGCCACAAATCTGCGAGAATTTTGTTAAAGCTGCATATGACCAGCGAATATCGGGGATCTATCTGCACATAGAGCCTCTGAGATGTGGGTGGGGGAAGGT-GGATGAGATCAGAAGACACATTGTCGATTTCAAGAAGTCCGGTAAATTTGTTGTTGGTTATATGCCTGTGTGTGGGGAGAAAGAGTACTACCTTGCTTGTGCGTGTGGTGAGCTGTATGCACCGCCAAGTGCTTATGTTGCTTTGTTTGGTCTAACTGTTCAGCAAACATTTCTCAGAGGTGTTCTTGAGAAAGTCGGGATAGAACCAGAAATTCAGCGAATTGGTCGTTACAAAAGTGCGGGAGGCCAACTTGCACGGGAGAGCATGTCAAATGAGGTTAGGGAGATGCTAGCCACACTGCTCGACAATATTTATGGAAACTGGCTGGATACAATATCTTCCAAACATGGGAAGAAAAAAGAAGAAATCGAGGAATTCATTAATTCAGGAGTCTATCAGGTTGCCAGACTTAAGGAAGAAGGTTGGATAACAGATTTACTTTATGATGATGAGGTCATGGCAATGTTGAAGGAGAGAGTAGCACAGAAAGACAAGAAAAGTCTGCGTATGGTTGATTACAGTAAATATTCACGTGTAAGTAAATGGACTCTTGGGTTACAAGGAGGGGGTGAACAAATTGCAGTGATCAGAGCATCTGGAAGCATAACACGTACTCGCAGCCCATTGAGTGTTCCTAGTTCAGGCATCATTGCTGAGCAGTTGATCGAGAAGATACGTACTGTTAGAGAGTCAGAAAAGTATAAAGCTGTTATCCTCCGTATAGACAGCCCTGGTGGTGATGCTCTTGCTTCTGATCTGATGTGGCGGGAAATTCGACTCCTAGCTGACACCAAGCCTGTGGTTGCTTCAATGTCTGATGTTGCTGCAAGTGGTGGGTACTACATGGCAATGGCTGCACCGGTCATTGTTGCTGAAAAACTCACGCTAACAGGATCAATTGGAGTTGTAACAGGGAAGTTCATCCTGCAAAAGCTATATGAGCGGATTGACTTCAATAAAGAAATTATATCTAAGGGTAGATATGCAGAGCTTAATGCTGCTGATCAACGCCCTTTAAGACCAGATGAGGCAGAACTTTTTGAAAAGTCAGCACAAAATGCTTATGCATTGTTTCGAGATAAAGCAGCCATGTCACGCTCAATGAATGTTGATCAGATGGAGACTGTTGCACAAGGTCGGGTGTGGAGTGGCCAAGATGCAGCTTCAAGAGGATTGGTTGATTCACTGGGTGGATTCTCACAAGCTCTTGCTATTGCAAAACAGAAAGCCAATATACCCCATGATAGGAAGGTCCAGCTAGTTGAGATCTCAAAGCCCTCACCAACATTACCAGAGATCTTGTCAGGAATTGGCA-GTTCATTGCTTGGAGTTGACAGGGCAGTGAAGGGAGTGCTCCAGGATGTCACTTCCCTAAATGGAGTCCAAGCTAGAATGGATGGAATATTGTTTGAAAGATTGGAAGATTTGTCTGGAGAAAATCAACTCTTATTGCTCGTAAAAGATATTGTTAATTATTTTGATTGATTCCACCAGTCAGTACCCTATGTTTTACAAACAGTTATACATAGAAGAAGAAAATGTCAACATGTCAATAATAATTCACCTTACCTAGAGGCTAGAAGCA-GGTAGACTTGGGATCCGTTCAGTACTTTTGGCACTGTATATTCTATTTTGTTCTTTTCATACTGCTGCCTATGGAAATGTTGTACATGCCTTACTGAAAATTCAAGCGATCTTGATTTTCTAGTTCGCTTGAACTGGAACCCAATAGATCACATTTACTCTTTGTTTATGAGATTTTATCAAAAAAAAAA]

[+] EMBL AK070290             [CTCCACCGCGCGCCGAATCCTACTCCCGTCGCCTCTCCGCGTCCCGGCCCGCGCCATCGAGTCCTCCCCCGGCACCACAAAGCAGGAGCCGACTCCGGCTGCCGGTGAGGGTGAGGCCCAGGAGCCGCCGCCCCCCGCTGCGTCGGCGTTCGAGGTGGAGGAGCTCGGGTGGGGGACCCAGCTCGCCGTGAAGCTACGCATGCTCGTGGCCCCGCCATGGAAGCGCGTCCGCAAGGGCAGCGTCCTTAACATGAAGCTTCGGGGCGAGATATCCGATCAGTTGAAGACACGCTTCTCTTCCGGGCTGTCATTGCCACAAATCTGCGAGAATTTTGTTAAAGCTGCATATGACCAGCGAATATCGGGGATCTATCTGCACATAGAGCCTCTGAGATGTGGGTGGGGGAAGGT GGATGAGATCAGAAGACACATTGTCGATTTCAAGAAGTCCGGTAAATTTGTTGTTGGTTATATGCCTGTGTGTGGGGAGAAAGAGTACTACCTTGCTTGTGCGTGTGGTGAGCTGTATGCACCGCCAAGTGCTTATGTTGCTTTGTTTGGTCTAACTGTTCAGCAAACATTTCTCAGAGGTGTTCTTGAGAAAGTCGGGATAGAACCAGAAATTCAGCGAATTGGTCGTTACAAAAGTGCGGGAGGCCAACTTGCACGGGAGAGCATGTCAAATGAGGTTAGGGAGATGCTAGCCACACTGCTCGACAATATTTATGGAAACTGGCTGGATACAATATCTTCCAAACATGGGAAGAAAAAAGAAGAAATCGAGGAATTCATTAATTCAGGAGTCTATCAGGTTGCCAGACTTAAGGAAGAAGGTTGGATAACAGATTTACTTTATGATGATGAGGTCATGGCAATGTTGAAGGAGAGAGTAGCACAGAAAGACAAGAAAAGTCTGCGTATGGTTGATTACAGTAAATATTCACGTGTAAGTAAATGGACTCTTGGGTTACAAGGAGGGGGTGAACAAATTGCAGTGATCAGAGCATCTGGAAGCATAACACGTACTCGCAGCCCATTGAGTGTTCCTAGTTCAGGCATCATTGCTGAGCAGTTGATCGAGAAGATACGTACTGTTAGAGAGTCAGAAAAGTATAAAGCTGTTATCCTCCGTATAGACAGCCCTGGTGGTGATGCTCTTGCTTCTGATCTGATGTGGCGGGAAATTCGACTCCTAGCTGACACCAAGCCTGTGGTTGCTTCAATGTCTGATGTTGCTGCAAGTGGTGGGTACTACATGGCAATGGCTGCACCGGTCATTGTTGCTGAAAAACTCACGCTAACAGGATCAATTGGAGTTGTAACAGGGAAGTTCATCCTGCAAAAGCTATATGAGCGGATTGACTTCAATAAAGAAATTATATCTAAGGGTAGATATGCAGAGCTTAATGCTGCTGATCAACGCCCTTTAAGACCAGATGAGGCAGAACTTTTTGAAAAGTCAGCACAAAATGCTTATGCATTGTTTCGAGATAAAGCAGCCATGTCACGCTCAATGAATGTTGATCAGATGGAGACTGTTGCACAAGGTCGGGTGTGGAGTGGCCAAGATGCAGCTTCAAGAGGATTGGTTGATTCACTGGGTGGATTCTCACAAGCTCTTGCTATTGCAAAACAGAAAGCCAATATACCCCATGATAGGAAGGTCCAGCTAGTTGAGATCTCAAAGCCCTCACCAACATTACCAGAGATCTTGTCAGGAATTGGCA GTTCATTGCTTGGAGTTGACAGGGCAGTGAAGGGAGTGCTCCAGGATGTCACTTCCCTAAATGGAGTCCAAGCTAGAATGGATGGAATATTGTTTGAAAGATTGGAAGATTTGTCTGGAGAAAATCAACTCTTATTGCTCGTAAAAGATATTGTTAATTATTTTGATTGATTCCACCAGTCAGTACCCTATGTTTTACAAACAGTTATACATAGAAGAAGAAAATGTCAACATGTCAATAATAATTCACCTTACCTAGAGGCTAGAAGCA GGTAGACTTGGGATCCGTTCAGTACTTTTGGCACTGTATATTCTATTTTGTTCTTTTCATACTGCTGCCTATGGAAATGTTGTACATGCCTTACTGAAAATTCAAGCGATCTTGATTTTCTAGTTCGCTTGAACTGGAACCCAATAGATCACATTTACTC                              ]
[+] EMBL CB633196             [CTCCACCGCGCGCCGAATCCTACTCCCGTCGCCTCTCCGCGTCCCGGCCCGCGCCATCGAGTCCTCCCCCGGCACCACAAAGCAGGAGCCGACTCCGGCTGCCGGTGAGGGTGAGGCCCAGGAGCTGCCGCCCCCCGCTGCGTCGGCGTTCGAGGTGGAGGAGCTCGGGTGGGGGACCCAGCTCGCCGTGAAGCTACGCATGCTCGTGGCCCCGCCATGGAAGCGCGTCCGCAAGGGCAGCGTCCTTAACATGAAGCTTCGGGGCGAGATATCCGATCAGTTGAAGACACGCTTCTCTTCCGGGCTGTCATTGCCACAAATCTGCGAGAATTTTGTTAAAGCTGCATATGACCCGCGAATATCGGGGATCTATCTGCACATAGAGCCTCTGAGATGTGGGTGGGGGAAGGTCGGATGAGATCAGAAGACACATTGTCGATTTCAAGAAGTCCGGTAAATTTGTTGTTGGTTATATGCCTGTGTGTGGGGAGAAAGAGTACTACCTTGCTTGTGCGTGTGGTGAGCTGTATGCACCGCCAAGTGCTTATGTTGCTTTGTTTGGTCTAACTGTTCAGCAAACATTTCTCAGAGGTGTTCTTGAGAAAGTCGGGATAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB633197             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTGACTTCAATAAAGAAATTATATCTAAGGGTAGATATGCAGAGCTTAATGCTGCTGATCAACGCCCTTTAAGACCAGATGAGGCAGAACTTTTTGAAAAGTCAGCACAAAATGCTTATGCATTGTTTCGAGATAAAGCAGCCATGTCACGCTCAATGAATGTTGATCAGATGGAGACTGTTGCACAAGGTCGGGTGTGGAGTGGCCAAGATGCAGCTTCAAGAGGATTGGTTGATTCACTGGGTGGATTCTCACAAGCTCTTGCTATTGCAAAACAGAAAGCCAATATACCCCATGATAGGAAGGTCCAGCTAGTTGAGATCTCAAAGCCCTCACCAACATTACCAGAGATCTTGTCAGGAATTGGCA GTTCATTGCTTGGAGTTGACAGGGCAGTGAAGGGAGTGCTCCAGGATGTCACTTCCCTAAATGGAGTCCAAGCTAGAATGGATGGAATATTGTTTGAAAGATTGGAAGATTTGTCTGGAGAAAATCAACTCTTATTGCTCGTAAAAGATATTGTTAATTATTTTGATTGATTCCACCAGTCAGTACCCTATGTTTTACAAACAGTTATACATAGAAGAAGAAAATGTCAACATGTCAATAATAATTCACCTTACCTAGAGGCTAGAAGCA GGTAGACTTGGGATCCGTTCAGTACTTTTGGCACTGTATATTCTATTTTGTTCTTTTCATACTGCTGCCTATGGAAATGTTGTACATGCCTTACTGAAAATTCAAGCGATCTTGATTTTCTAGTTCGCTTGAACTGGAACCCAATAGATCACATTTAC                                ]
[+] EMBL BI807201             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGATA GAA GTCCANCTAGTTGAGATCTC AAGCCCTC CC ACATTACCAGAGATCTTTTCAGGAATTTGCACGTTCATTGCTTGGAGTTGACA GGCAGTGAAGGGAGTGCTCCAGGATGTCACTTCCCTAAATGGAGTCC AGCTAGAATGGATGGAATATTGTTTGAAAGATTGGAAGATTTGTCTGGAGAAAATCAACTCTTATTGCTCGTAAAAGATATTGTTAATTATTTTGATTGATTCCACCAGTCAGTACCCTATGTTTTAC AACAGTTATACATAGAAGAAGAAAATGTC ACATGTCAATAATAATTCACCTTACCTAGAGGCTAGAAGCACGGTAGACTTGGGATCCGTTCAGTACTTTTGGCCCTGTATATTCTATTTTGTTCTTTTCATACTGCTGCCTATGGAAATGTTGTACATGCCTTACTGAAAATTCAAGCGATCTTGATTTTCTAGTTCGCTTGAACTGGAACCC ATAGATCACATTTACTCTTTGTTTATGAGATTTTATCAAAAAAAAAA]




>consensus_6942#0
CTCCACCGCGCGCCGAATCCTACTCCCGTCGCCTCTCCGCGTCCCGGCCCGCGCCATCGA
GTCCTCCCCCGGCACCACAAAGCAGGAGCCGACTCCGGCTGCCGGTGAGGGTGAGGCCCA
GGAGCCGCCGCCCCCCGCTGCGTCGGCGTTCGAGGTGGAGGAGCTCGGGTGGGGGACCCA
GCTCGCCGTGAAGCTACGCATGCTCGTGGCCCCGCCATGGAAGCGCGTCCGCAAGGGCAG
CGTCCTTAACATGAAGCTTCGGGGCGAGATATCCGATCAGTTGAAGACACGCTTCTCTTC
CGGGCTGTCATTGCCACAAATCTGCGAGAATTTTGTTAAAGCTGCATATGACCAGCGAAT
ATCGGGGATCTATCTGCACATAGAGCCTCTGAGATGTGGGTGGGGGAAGGTGGATGAGAT
CAGAAGACACATTGTCGATTTCAAGAAGTCCGGTAAATTTGTTGTTGGTTATATGCCTGT
GTGTGGGGAGAAAGAGTACTACCTTGCTTGTGCGTGTGGTGAGCTGTATGCACCGCCAAG
TGCTTATGTTGCTTTGTTTGGTCTAACTGTTCAGCAAACATTTCTCAGAGGTGTTCTTGA
GAAAGTCGGGATAGAACCAGAAATTCAGCGAATTGGTCGTTACAAAAGTGCGGGAGGCCA
ACTTGCACGGGAGAGCATGTCAAATGAGGTTAGGGAGATGCTAGCCACACTGCTCGACAA
TATTTATGGAAACTGGCTGGATACAATATCTTCCAAACATGGGAAGAAAAAAGAAGAAAT
CGAGGAATTCATTAATTCAGGAGTCTATCAGGTTGCCAGACTTAAGGAAGAAGGTTGGAT
AACAGATTTACTTTATGATGATGAGGTCATGGCAATGTTGAAGGAGAGAGTAGCACAGAA
AGACAAGAAAAGTCTGCGTATGGTTGATTACAGTAAATATTCACGTGTAAGTAAATGGAC
TCTTGGGTTACAAGGAGGGGGTGAACAAATTGCAGTGATCAGAGCATCTGGAAGCATAAC
ACGTACTCGCAGCCCATTGAGTGTTCCTAGTTCAGGCATCATTGCTGAGCAGTTGATCGA
GAAGATACGTACTGTTAGAGAGTCAGAAAAGTATAAAGCTGTTATCCTCCGTATAGACAG
CCCTGGTGGTGATGCTCTTGCTTCTGATCTGATGTGGCGGGAAATTCGACTCCTAGCTGA
CACCAAGCCTGTGGTTGCTTCAATGTCTGATGTTGCTGCAAGTGGTGGGTACTACATGGC
AATGGCTGCACCGGTCATTGTTGCTGAAAAACTCACGCTAACAGGATCAATTGGAGTTGT
AACAGGGAAGTTCATCCTGCAAAAGCTATATGAGCGGATTGACTTCAATAAAGAAATTAT
ATCTAAGGGTAGATATGCAGAGCTTAATGCTGCTGATCAACGCCCTTTAAGACCAGATGA
GGCAGAACTTTTTGAAAAGTCAGCACAAAATGCTTATGCATTGTTTCGAGATAAAGCAGC
CATGTCACGCTCAATGAATGTTGATCAGATGGAGACTGTTGCACAAGGTCGGGTGTGGAG
TGGCCAAGATGCAGCTTCAAGAGGATTGGTTGATTCACTGGGTGGATTCTCACAAGCTCT
TGCTATTGCAAAACAGAAAGCCAATATACCCCATGATAGGAAGGTCCAGCTAGTTGAGAT
CTCAAAGCCCTCACCAACATTACCAGAGATCTTGTCAGGAATTGGCAGTTCATTGCTTGG
AGTTGACAGGGCAGTGAAGGGAGTGCTCCAGGATGTCACTTCCCTAAATGGAGTCCAAGC
TAGAATGGATGGAATATTGTTTGAAAGATTGGAAGATTTGTCTGGAGAAAATCAACTCTT
ATTGCTCGTAAAAGATATTGTTAATTATTTTGATTGATTCCACCAGTCAGTACCCTATGT
TTTACAAACAGTTATACATAGAAGAAGAAAATGTCAACATGTCAATAATAATTCACCTTA
CCTAGAGGCTAGAAGCAGGTAGACTTGGGATCCGTTCAGTACTTTTGGCACTGTATATTC
TATTTTGTTCTTTTCATACTGCTGCCTATGGAAATGTTGTACATGCCTTACTGAAAATTC
AAGCGATCTTGATTTTCTAGTTCGCTTGAACTGGAACCCAATAGATCACATTTACTCTTT
GTTTATGAGATTTTATCAAAAAAAAAA
clustalw multiple alignements is not computed in this case