cluster # 6956

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Oryza sativa
cluster # 6956 cluster # 6956 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6956#0 length = 539 sequences # 4

consensusID : consensus_6956#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 539
fasta sequence

                              [NATGNACAGAGGGAGATGTGCCGCAGGCTCAATGTTCATGTATTGCCAATGTTCCGCTTTTACAGAGGNGCAGAAGGCCGTATCTGTAGCTTCANCTGTNCAATTTCAACTATTTATAAGATCAAAGATGCATTGAAAAGGCATGGGGTTCAGCTAGAGAATCTNGGNCCAGATAAGGGCTTGGAGAAATCAGAACTTCAGAACTCTGATATTGACGCTTCATATAACATGGATGGAGGTGTGGGTGCTGTCCTGCCCAACAATGAATAGGCATCAATTTTATGATGCAAATTGCACGATTTGGTGCTTTATAATTTGGATGTATGTTTATAGAAGCCAAGAGTCTGATTGTGGGTGTGATAATCTTGAATATTGGCGCCCATAGATGCTCATAAAAATCCTATATATTAAAAGGATAAGGCAATGCGCCAGTGTGTCTCTAGTTTTGTAACATTGAAGCATTTTAAGCTTCTTGTATTCCGCTTACTTTTTTCATAATAAATCGTACTGGTGTGGATTACTTTTTTCATAAAAAAAAA]

[+] EMBL CA765372             [NATGNACAGAGGGAGATGTGCCGCAGGCTCAATGTTCATGTATTGCCAATGTTCCGCTTTTACAGAGGNGCAGAAGGCCGTATCTGTAGCTTCANCTGTNCAATTTCAACTATTTATAAGATCAAAGATGCATTGAAAAGGCATGGGGTTCAGCTAGAGAATCTNGGNCCAGATAAGGGCTTGGAGAAATCAGAACTTCAGAACTCTGATATTGACGCTTCATATAACATGGATGGAGGTGTGGGTGCTGTCCTGCCCAACAATGAATAGGCATCAATTTTATGATGCAAATTGCACGATTTGGNGCTTTATAATTTGGATGTNTGTTTATAGAAGCCAAGAGTCTGATTGTGGGTGTGATAATCTTGAATATTGGCGCCCATAGATGCTCATAAAAATCCTATATATTAAAAGGATAAGGCAATGCGCCAGNGTGTCTCTAGTTTTGTAACATTGAAGCATTTTAAGCTTCTTGNATTCCGNTTACTTTTTTCATAATAAATCGGACTGGGGNGGATTACTT                ]
[+] EMBL BI795787             [                                                                                                                                    TTGAAAAGGCAT GGGTTCAGCTAGAGAATCTTGGACCAGATAAGGGCTTGGAGAAATCAGAACTTCAGAACTCTGATATTGACGCTTCATATAACATGGATGGAGGTGTGGGT CTGTCGTGCCCAAC ATGAATAGGCATCAATTTTATGATGC AATTGCACGATTTGGTGCTTTATAATTTGGATGTATGTTTATAGAAGCCAAGAGTCTGATTGTGGGTGTGATAATCTTGAATATTGGCGCCCATAGATGCTCATAAAAATCCTATATATTAAAAGGATAAGGC ATGCGCCAGTGTGTCTCTAGTTTTGTAACATTGAAGCATTTTAAGCTTCTTGTATTCCGCTTACTTTTTTCATAATAAATCGTACTGGTGTGGATTACTTTTTTCAAAAAAAA   ]
[+] EMBL C99178               [                                                                                                                                                                                                                                                                   ACAATGAATAGGCATCAATTNNATGATGCAAATTGCACAATTTGGTGCTTTATAATTTGGATGTATGTTTATAGAAGCCAAGAGNCTGATTGTGGGTGTGATAATCTTGAATATTGGCGCCCATAGATGCTCATAAAAATCCTATATATTAAAAGGATAAGGCAATGCGCCAGTGTGTCTCTAGTTTTGTAACATTGAAGCATTTTAAGCTTCTTGTATTCCGCTTACTTTTTTCATAATAAATCGTACTGGTGTGGATTACTTTTTTCATAATAAAAAA]
[+] EMBL C99146               [                                                                                                                                                                                                                                                                                                          ATTTGGTGCTTTATAATTTGGATGTATGTTTATAGAAGCCAAGAGTCTGATTGTGGGTGTGATAATCTTGAATATTGGCGCCCATAGATGCTCATAAAAATCCTATATATTAAAAGGATAAGGCAATGCGCCAGTGTGTCTCTAGTTTTGTAACATTGAAGCATTTTAAGCTTCTTGTATTCCGCTTACTTTTTTCATAATAAATCGTACTGGTGTGGATTACTTTTTTCATAAAAn    ]




>consensus_6956#0
NATGNACAGAGGGAGATGTGCCGCAGGCTCAATGTTCATGTATTGCCAATGTTCCGCTTT
TACAGAGGNGCAGAAGGCCGTATCTGTAGCTTCANCTGTNCAATTTCAACTATTTATAAG
ATCAAAGATGCATTGAAAAGGCATGGGGTTCAGCTAGAGAATCTNGGNCCAGATAAGGGC
TTGGAGAAATCAGAACTTCAGAACTCTGATATTGACGCTTCATATAACATGGATGGAGGT
GTGGGTGCTGTCCTGCCCAACAATGAATAGGCATCAATTTTATGATGCAAATTGCACGAT
TTGGTGCTTTATAATTTGGATGTATGTTTATAGAAGCCAAGAGTCTGATTGTGGGTGTGA
TAATCTTGAATATTGGCGCCCATAGATGCTCATAAAAATCCTATATATTAAAAGGATAAG
GCAATGCGCCAGTGTGTCTCTAGTTTTGTAACATTGAAGCATTTTAAGCTTCTTGTATTC
CGCTTACTTTTTTCATAATAAATCGTACTGGTGTGGATTACTTTTTTCATAAAAAAAAA

clustalw multiple alignements is not computed in this case