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Oryza sativa
cluster # 6958 cluster # 6958       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6958#0 length = 2803 sequences # 3  
consensus_6958#1 length = 675 sequences # 1  

consensusID : consensus_6958#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2803
fasta sequence
                              [CTTCGCCCAGCTCGAGTCGTAGCACCAAAAGAAGCAAGCACGCCTAGCTCGTTATCGATCATGGCGGCCACGTCGCCACTGCCACGGTGGGCGCCGACGCCAAGTCCGTCGCGGCCGCTCTGGCGCTGGGGCTGGGGCGGCGGCGCCACGCCGGACGCCCGGGCGGACGGAGGTGTCACCGGTTGGACCTCGTCGTTCTTCGCCGCCGTCTTCCCGTGGACGAGGAGACGACGTGTCGATGACAGATGGGCGCCGTCGGCCGGCGGCGGAGTGGGGACGTTCGACGGCGTCGAGGTGCCGCTGCCGGCGGCGCAGGCAGTTTCGCTTCCACGGGCGGCAGCGGACGTCGTCGACGACCCCGCGGTGTTCCTGACGTGGGAGGACGTGCGCGTGACGGTGCCCGGCCGCACTCGCGGCTCGCCGCCGGCGAGGATCCTCGACGGGATCACCGGGCACGCGCGGCCGGGGGAGGTTCTGGCGATCATGGGGCCGTCGGGGTGCGGGAAGACGACGCTTCTTGACACTCTCGCAGGACGGTTAGGACAAGAAATGAATCAAACCGGTGTGATTTTAATAAATGGCCGGCAGGAAAAGCTTGCCTTCGGAACCTCGGCATATGTAACCCAAGACAACGTGCTCATGTCGACTCTATCGGTGAGAGAAGCCGTCTACTACTCGGCTCACCTGCAGCTACCTGACACGATGCTGGCGTCAGAGAAGCGCGCCCACGCGGAGCGTGTAATCCGGGAGATGGGGCTTAGCGACACCATGGACACGCGCATCGGCGGCCGTATCACCAAGGGCATCAGCGGCGGGCAGCGGAAGCGGATGAGCATCTGCATTGAGATGCTGACACGGCCGCGGCTGCTTTTCCTCGACGAGCCCACCAGCGGGCTGGATAGCGCCGCCTCCTACCACGTCATGAGCCACATCACCCGGGTCGCTGCCAGGGAAGGGATGACTGTCATTGCCGCTGTGCACCAGCCCAGTGGCGACGTCTTTGACCTCTTCCATGGTCTCTTATTGCTAGCCTATGGGAGGATGGTATTCTTTGGGACAGTTTCTAATGCTACTGAGTTTTTTACCCAAAGTGGTTTTCCATGCCCACACCTGAGGAACCCATCCGACCACTTCCTGAGAACAATCAACAAGGACTTTGATGAGGGAACTATGGAAAGCTCCAAGGCTAACAGAAAAACAGCAGCTGAAGCAACAAATATTCTAACAAATGCATACCACTCCACTTATTCAGAGAAAACAGCCAATGAGATAGTTGAGATGAAAGGGATGGGTGGAACTCCATTTAGAAGGAAAGAGCAAGCCAGCTTCTTGACAAAGCTCCTTGTGCTAACAAGAAGATCCTTCCTAAATATGCACAGGGACATAGGCTACTACTGGATGCGTTTGGGCATTTATTTGGGCATTGGCATTTGCCTCGGCACCATCTTCTACCAAGTTGGTTACAGCTACAGTTCTATCCAGAGTAGATGTGAAGTAATAATGTATACAACCGCGCTTGTAACTTTCATGGCAATTGGAGGATTCCCTTCTTTCGTAGAAGACATAAAGTTATTCAGAAGGGAGAGATTGAGCGGCCATTACGGAGTCATGGAATTTGTAATCTCAAACACCCTCTCAGCCACCCCTTACCTTGCCGTCATCGCTGTGATCCCCGGAGCAATGATGTATTACCTCACAGGGCTGACCCGAGGTGCGGAACACTTCGCATACTTCGTCGCCACACTCTGCATGTGCACGCTGCTGGTAGAGAGCATGATGATGATCATCGCAGTCATCGTCCCAGACTTCCTCATGGGAATCATCATCGGTGCCGGGATACAGGGCATGATGATGCTCAATGGTGGCTTCTTCCGCCTCCCGAACGAGCTCCCGAAGCCGGTGTGGAAGTACCCTTGCTACTACATCTCCTTCCACAAGTATGCGGTGCAGGGGTTTTACAAGAATGAGTTCATAGGGCTGTCTTTTCCAAGTGATCAGCTCATCGAGGCCAATGCCACTATCAGTGGTCTTCAGGTTCTCAAGGAAAGGCTGCAAGTGGAGATGGGCTATTCAAAGTGGGTAAACCTTGCTATCCTGTTTGGGATGATGGTGACATACAGGATGATATTCTTCGTTATTGTCAAGATTGCAGAGGAGCTCAGGCTAAAACTGAGAGGGATTAGATTTAGACGGCTTAAATAGTCGTCTTCTCTCTTGGAAAACCCGGCCAGGAGGAAGGGATCATTAAACACAAATAAAATTTGAAGTACAGAATGTACTACAGTAGTGTGGACTTATGTCATTTGAGCTTGATAATTCCTAACGGGTATTTTCTGGCAT-TTTAGTCCT-TTGCCAAT-GGAACAAAATTGTAAAGGATTTTTTAAGGTAAACCAAGTTATCGTGAACGGTTCGTTGCACAGTGTTAAAGGGCTA-ACATTGCTCCTATCGCATCGGTGGTAAGATGTCATTTCTTCATATTTCAATTTTCTTAATGCCAAGTATTGCATTCCAAAAATGAATATATGGAGCAATAATGCCTAATGTAAGCACCGACATATTTTAATGTTCTTCCTGAAAAGTGACAGCAAGAGTGAAATGTGAAGAAATAATGAATATTTATACAGGTGATGTATTTACAACGGCCTGGTTTGAAACTTTTCTTCTGGGAGAGAAAAAGTTTGGGACAATCCATATGAAAGGATTCTATAGANAAACAAATAAATGGTAGTAGAACGCATTGCTGTTTGAGATGTGTACACCTTTAAGAAATAAGATATATACAAATACAATTCTCCACCTCAAA]

[+] EMBL AK067639             [CTTCGCCCAGCTCGAGTCGTAGCACCAAAAGAAGCAAGCACGCCTAGCTCGTTATCGATCATGGCGGCCACGTCGCCACTGCCACGGTGGGCGCCGACGCCAAGTCCGTCGCGGCCGCTCTGGCGCTGGGGCTGGGGCGGCGGCGCCACGCCGGACGCCCGGGCGGACGGAGGTGTCACCGGTTGGACCTCGTCGTTCTTCGCCGCCGTCTTCCCGTGGACGAGGAGACGACGTGTCGATGACAGATGGGCGCCGTCGGCCGGCGGCGGAGTGGGGACGTTCGACGGCGTCGAGGTGCCGCTGCCGGCGGCGCAGGCAGTTTCGCTTCCACGGGCGGCAGCGGACGTCGTCGACGACCCCGCGGTGTTCCTGACGTGGGAGGACGTGCGCGTGACGGTGCCCGGCCGCACTCGCGGCTCGCCGCCGGCGAGGATCCTCGACGGGATCACCGGGCACGCGCGGCCGGGGGAGGTTCTGGCGATCATGGGGCCGTCGGGGTGCGGGAAGACGACGCTTCTTGACACTCTCGCAGGACGGTTAGGACAAGAAATGAATCAAACCGGTGTGATTTTAATAAATGGCCGGCAGGAAAAGCTTGCCTTCGGAACCTCGGCATATGTAACCCAAGACAACGTGCTCATGTCGACTCTATCGGTGAGAGAAGCCGTCTACTACTCGGCTCACCTGCAGCTACCTGACACGATGCTGGCGTCAGAGAAGCGCGCCCACGCGGAGCGTGTAATCCGGGAGATGGGGCTTAGCGACACCATGGACACGCGCATCGGCGGCCGTATCACCAAGGGCATCAGCGGCGGGCAGCGGAAGCGGATGAGCATCTGCATTGAGATGCTGACACGGCCGCGGCTGCTTTTCCTCGACGAGCCCACCAGCGGGCTGGATAGCGCCGCCTCCTACCACGTCATGAGCCACATCACCCGGGTCGCTGCCAGGGAAGGGATGACTGTCATTGCCGCTGTGCACCAGCCCAGTGGCGACGTCTTTGACCTCTTCCATGGTCTCTTATTGCTAGCCTATGGGAGGATGGTATTCTTTGGGACAGTTTCTAATGCTACTGAGTTTTTTACCCAAAGTGGTTTTCCATGCCCACACCTGAGGAACCCATCCGACCACTTCCTGAGAACAATCAACAAGGACTTTGATGAGGGAACTATGGAAAGCTCCAAGGCTAACAGAAAAACAGCAGCTGAAGCAACAAATATTCTAACAAATGCATACCACTCCACTTATTCAGAGAAAACAGCCAATGAGATAGTTGAGATGAAAGGGATGGGTGGAACTCCATTTAGAAGGAAAGAGCAAGCCAGCTTCTTGACAAAGCTCCTTGTGCTAACAAGAAGATCCTTCCTAAATATGCACAGGGACATAGGCTACTACTGGATGCGTTTGGGCATTTATTTGGGCATTGGCATTTGCCTCGGCACCATCTTCTACCAAGTTGGTTACAGCTACAGTTCTATCCAGAGTAGATGTGAAGTAATAATGTATACAACCGCGCTTGTAACTTTCATGGCAATTGGAGGATTCCCTTCTTTCGTAGAAGACATAAAGTTATTCAGAAGGGAGAGATTGAGCGGCCATTACGGAGTCATGGAATTTGTAATCTCAAACACCCTCTCAGCCACCCCTTACCTTGCCGTCATCGCTGTGATCCCCGGAGCAATGATGTATTACCTCACAGGGCTGACCCGAGGTGCGGAACACTTCGCATACTTCGTCGCCACACTCTGCATGTGCACGCTGCTGGTAGAGAGCATGATGATGATCATCGCAGTCATCGTCCCAGACTTCCTCATGGGAATCATCATCGGTGCCGGGATACAGGGCATGATGATGCTCAATGGTGGCTTCTTCCGCCTCCCGAACGAGCTCCCGAAGCCGGTGTGGAAGTACCCTTGCTACTACATCTCCTTCCACAAGTATGCGGTGCAGGGGTTTTACAAGAATGAGTTCATAGGGCTGTCTTTTCCAAGTGATCAGCTCATCGAGGCCAATGCCACTATCAGTGGTCTTCAGGTTCTCAAGGAAAGGCTGCAAGTGGAGATGGGCTATTCAAAGTGGGTAAACCTTGCTATCCTGTTTGGGATGATGGTGACATACAGGATGATATTCTTCGTTATTGTCAAGATTGCAGAGGAGCTCAGGCTAAAACTGAGAGGGATTAGATTTAGACGGCTTAAATAGTCGTCTTCTCTCTTGGAAAACCCGGCCAGGAGGAAGGGATCATTAAACACAAATAAAATTTGAAGTACAGAATGTACTACAGTAGTGTGGACTTATGTCATTTGAGCTTGATAATTCCTAACGGGTATTTTCTGGCAT TTTAGTCCT TTGCCAAT GGAACAAAATTGTAAAGGATTTTTTAAGGTAAACCAAGTTATCGTGAACGGTTCGTTGCACAGTGTTAAAGGGCTA ACATTGCTCCTATCGCATCGGTGGTAAGATGTCATTTCTTCATATTTCAATTTTCTTAATGCCAAGTATTGCATTCCAAAAATGAATATATGGAGCAATAATGCCTAATGTAAGCACCGACATATTTTAATGTTCTTCCTGAAAAGTGACAGCAAGAGTGAAATGTGAAGAAATAATGAATATTTATACAG                                                                                                                                                                                   ]
[+] EMBL AK104709             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATGCATACCACTCCACTTATTCAGAGAAAACAGCCAATGAGATAGTTGAGATGAAAGGGATGGGTGGAACTCCATTTAGAAGGAAAGAGCAAGCCAGCTTCTTGACAAAGCTCCTTGTGCTAACAAGAAGATCCTTCCTAAATATGCACAGGGACATAGGCTACTACTGGATGCGTTTGGGCATTTATTTGGGCATTGGCATTTGCCTCGGCACCATCTTCTACCAAGTTGGTTACAGCTACAGTTCTATCCAGAGTAGATGTGAAGTAATAATGTATACAACCGCGCTTGTAACTTTCATGGCAATTGGAGGATTCCCTTCTTTCGTAGAGGACATAAAGTTATTCAGAAGGGAGAGATTGAGCGGCCATTACGGAGTCATGGAATTTGTAATCTCAAACACCCTCTCAGCCACCCCTTACCTTGCCGTCATCGCTGTGATCCCCGGAGCAATGATGTATTACCTCACAGGGCTGACCCGAGGTGCGGAACACTTCGCATACTTCGTCGCCACACTCTGCATGTGCACGCTGCTGGTAGAGAGCATGATGATGATCATCGCAGTCATCGTCCCAGACTTCCTCATGGGAATCATCATCGGTGCCGGGATACAGGGCATGATGATGCTCAATGGTGGCTTCTTCCGCCTCCCGAACGAGCTCCCGAAGCCGGTGTGGAAGTACCCTTGCTACTACATCTCCTTCCACAAGTATGCGGTGCAGGGGTTTTACAAGAATGAGTTCATAGGGCTGTCTTTTCCAAGTGATCAGCTCATCGAGGCCAATGCCACTATCAGTGGTCTTCAGGTTCTCAAGGAAAGGCTGCAAGTGGAGATGGGCTATTCAAAGTGGGTAAACCTTGCTATCCTGTTTGGGATGATGGTGACATACAGGATGATATTCTTCGTTATTGTCAAGATTGCAGAGGAGCTCAGGCTAAAACTGAGAGGGATTAGATTTAGACGGCTTAAATAGTCGTCTTCTCTCTTGGAAAACCCGGCCAGGAGGAAGGGATCATTAAACACAAATAAAATTTGAAGTACAGAATGTACTACAGTAGTGTGGACTTATGTCATTTGAGCTTGATAATTCCTAACGGGTATTTTCTGGCAT TTTAGTCCT TTGCCAAT GGAACAAAATTGTAAAGGATTTTTTAAGGTAAACCA                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI806808             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGTGCCATGTTTAGTCCTNTTCCAAATGGGTACAAAATTGTNAAGGANTTTTTAAGGTAAACCAAGTTATCGTGNACGGTTCGTTGCACAGTGTNAAAGGGCTATACATTGCTCCTATCGCATCGGTGGTAAGATGTCATTTCTTCATATTTCAATTTTCTTAATGCCAAGTATTGCATTCC AAAATGNATGTATGGAGCAATAATGCCTNATGTAAGCACCGACATATTTTAATGTTCTTCCTGAAAAGTGACAGCAAGAGTGAAATGTGAAGAAATAATGAATATTTATACTAGTGATGTATTTACAACGGCCTGGTTTGAAACTTTTCTTCTGGGAGAGAAAAAGTTTGGGACAATCCATATGAAAGGATTCTATAGANAAACAAATAAATGGTAGTAGAACGCATTGCTGTTTGAGATGTGTACACCTTTAAGAAATAAGATATATACAAATACAATTCTCCACCTCAAA]


>consensus_6958#0 CTTCGCCCAGCTCGAGTCGTAGCACCAAAAGAAGCAAGCACGCCTAGCTCGTTATCGATC ATGGCGGCCACGTCGCCACTGCCACGGTGGGCGCCGACGCCAAGTCCGTCGCGGCCGCTC TGGCGCTGGGGCTGGGGCGGCGGCGCCACGCCGGACGCCCGGGCGGACGGAGGTGTCACC GGTTGGACCTCGTCGTTCTTCGCCGCCGTCTTCCCGTGGACGAGGAGACGACGTGTCGAT GACAGATGGGCGCCGTCGGCCGGCGGCGGAGTGGGGACGTTCGACGGCGTCGAGGTGCCG CTGCCGGCGGCGCAGGCAGTTTCGCTTCCACGGGCGGCAGCGGACGTCGTCGACGACCCC GCGGTGTTCCTGACGTGGGAGGACGTGCGCGTGACGGTGCCCGGCCGCACTCGCGGCTCG CCGCCGGCGAGGATCCTCGACGGGATCACCGGGCACGCGCGGCCGGGGGAGGTTCTGGCG ATCATGGGGCCGTCGGGGTGCGGGAAGACGACGCTTCTTGACACTCTCGCAGGACGGTTA GGACAAGAAATGAATCAAACCGGTGTGATTTTAATAAATGGCCGGCAGGAAAAGCTTGCC TTCGGAACCTCGGCATATGTAACCCAAGACAACGTGCTCATGTCGACTCTATCGGTGAGA GAAGCCGTCTACTACTCGGCTCACCTGCAGCTACCTGACACGATGCTGGCGTCAGAGAAG CGCGCCCACGCGGAGCGTGTAATCCGGGAGATGGGGCTTAGCGACACCATGGACACGCGC ATCGGCGGCCGTATCACCAAGGGCATCAGCGGCGGGCAGCGGAAGCGGATGAGCATCTGC ATTGAGATGCTGACACGGCCGCGGCTGCTTTTCCTCGACGAGCCCACCAGCGGGCTGGAT AGCGCCGCCTCCTACCACGTCATGAGCCACATCACCCGGGTCGCTGCCAGGGAAGGGATG ACTGTCATTGCCGCTGTGCACCAGCCCAGTGGCGACGTCTTTGACCTCTTCCATGGTCTC TTATTGCTAGCCTATGGGAGGATGGTATTCTTTGGGACAGTTTCTAATGCTACTGAGTTT TTTACCCAAAGTGGTTTTCCATGCCCACACCTGAGGAACCCATCCGACCACTTCCTGAGA ACAATCAACAAGGACTTTGATGAGGGAACTATGGAAAGCTCCAAGGCTAACAGAAAAACA GCAGCTGAAGCAACAAATATTCTAACAAATGCATACCACTCCACTTATTCAGAGAAAACA GCCAATGAGATAGTTGAGATGAAAGGGATGGGTGGAACTCCATTTAGAAGGAAAGAGCAA GCCAGCTTCTTGACAAAGCTCCTTGTGCTAACAAGAAGATCCTTCCTAAATATGCACAGG GACATAGGCTACTACTGGATGCGTTTGGGCATTTATTTGGGCATTGGCATTTGCCTCGGC ACCATCTTCTACCAAGTTGGTTACAGCTACAGTTCTATCCAGAGTAGATGTGAAGTAATA ATGTATACAACCGCGCTTGTAACTTTCATGGCAATTGGAGGATTCCCTTCTTTCGTAGAA GACATAAAGTTATTCAGAAGGGAGAGATTGAGCGGCCATTACGGAGTCATGGAATTTGTA ATCTCAAACACCCTCTCAGCCACCCCTTACCTTGCCGTCATCGCTGTGATCCCCGGAGCA ATGATGTATTACCTCACAGGGCTGACCCGAGGTGCGGAACACTTCGCATACTTCGTCGCC ACACTCTGCATGTGCACGCTGCTGGTAGAGAGCATGATGATGATCATCGCAGTCATCGTC CCAGACTTCCTCATGGGAATCATCATCGGTGCCGGGATACAGGGCATGATGATGCTCAAT GGTGGCTTCTTCCGCCTCCCGAACGAGCTCCCGAAGCCGGTGTGGAAGTACCCTTGCTAC TACATCTCCTTCCACAAGTATGCGGTGCAGGGGTTTTACAAGAATGAGTTCATAGGGCTG TCTTTTCCAAGTGATCAGCTCATCGAGGCCAATGCCACTATCAGTGGTCTTCAGGTTCTC AAGGAAAGGCTGCAAGTGGAGATGGGCTATTCAAAGTGGGTAAACCTTGCTATCCTGTTT GGGATGATGGTGACATACAGGATGATATTCTTCGTTATTGTCAAGATTGCAGAGGAGCTC AGGCTAAAACTGAGAGGGATTAGATTTAGACGGCTTAAATAGTCGTCTTCTCTCTTGGAA AACCCGGCCAGGAGGAAGGGATCATTAAACACAAATAAAATTTGAAGTACAGAATGTACT ACAGTAGTGTGGACTTATGTCATTTGAGCTTGATAATTCCTAACGGGTATTTTCTGGCAT TTTAGTCCTTTGCCAATGGAACAAAATTGTAAAGGATTTTTTAAGGTAAACCAAGTTATC GTGAACGGTTCGTTGCACAGTGTTAAAGGGCTAACATTGCTCCTATCGCATCGGTGGTAA GATGTCATTTCTTCATATTTCAATTTTCTTAATGCCAAGTATTGCATTCCAAAAATGAAT ATATGGAGCAATAATGCCTAATGTAAGCACCGACATATTTTAATGTTCTTCCTGAAAAGT GACAGCAAGAGTGAAATGTGAAGAAATAATGAATATTTATACAGGTGATGTATTTACAAC GGCCTGGTTTGAAACTTTTCTTCTGGGAGAGAAAAAGTTTGGGACAATCCATATGAAAGG ATTCTATAGANAAACAAATAAATGGTAGTAGAACGCATTGCTGTTTGAGATGTGTACACC TTTAAGAAATAAGATATATACAAATACAATTCTCCACCTCAAA



consensusID : consensus_6958#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence
                              [GGCATATGTAACCCAAGACAACGTGCTCATGTCGACTCTATCGGTGAGAGAAGCCGTCTACTACTCGGCTCACCTGCAGCTACCTGACACGATGCTGGCGTCAGAGAAGCGCGCCCACGCGGAGCGTGTAATCCGGGAGATGGGGCTTAGCGACACCATGGACACGCGCATCGGCGGCCGTATCACCAAGGGCATCAGCGGCGGGCAGCGGAAGCGGATGAGCATCTGCATTGAGATGCTGACACGGCCGCGGCTGCTTTTCCTCGACGAGCCCACCAGCGGGCTGGATAGCGCCGCCTCCTACCACGTCATGAGCCACATCACCCGGGTCGCTGCCAGGGAAGGGATGACTGTCATTGCCGCTGTGCACCAGCCCAGTGGCGACGTCTTTGACCTCTTCCATGGTCTCTTATTGCTAGCCTATGGGAGGATGGTATTCTTTGGGACAGTTTCTAATGCTACTGAGGTAATTAATTGACACTCTTTTTGTATGCTATCTATTTTCACTGGAATTTTGACTTTTGATTAAAATTTTATTCACAAAGATTTTAGATTTTAGGTACTACTTTTCCATCCAACCACCCCTCATTTAATTTTCACCCGATTTTACACATAAACACGCTCCACTCATTAACTACCCCTCATTTAATGATGGACATTATAGTCTTTTCCTTT]

[+] EMBL CB673723             [GGCATATGTAACCCAAGACAACGTGCTCATGTCGACTCTATCGGTGAGAGAAGCCGTCTACTACTCGGCTCACCTGCAGCTACCTGACACGATGCTGGCGTCAGAGAAGCGCGCCCACGCGGAGCGTGTAATCCGGGAGATGGGGCTTAGCGACACCATGGACACGCGCATCGGCGGCCGTATCACCAAGGGCATCAGCGGCGGGCAGCGGAAGCGGATGAGCATCTGCATTGAGATGCTGACACGGCCGCGGCTGCTTTTCCTCGACGAGCCCACCAGCGGGCTGGATAGCGCCGCCTCCTACCACGTCATGAGCCACATCACCCGGGTCGCTGCCAGGGAAGGGATGACTGTCATTGCCGCTGTGCACCAGCCCAGTGGCGACGTCTTTGACCTCTTCCATGGTCTCTTATTGCTAGCCTATGGGAGGATGGTATTCTTTGGGACAGTTTCTAATGCTACTGAGGTAATTAATTGACACTCTTTTTGTATGCTATCTATTTTCACTGGAATTTTGACTTTTGATTAAAATTTTATTCACAAAGATTTTAGATTTTAGGTACTACTTTTCCATCCAACCACCCCTCATTTAATTTTCACCCGATTTTACACATAAACACGCTCCACTCATTAACTACCCCTCATTTAATGATGGACATTATAGTCTTTTCCTTT]


>consensus_6958#1 GGCATATGTAACCCAAGACAACGTGCTCATGTCGACTCTATCGGTGAGAGAAGCCGTCTA CTACTCGGCTCACCTGCAGCTACCTGACACGATGCTGGCGTCAGAGAAGCGCGCCCACGC GGAGCGTGTAATCCGGGAGATGGGGCTTAGCGACACCATGGACACGCGCATCGGCGGCCG TATCACCAAGGGCATCAGCGGCGGGCAGCGGAAGCGGATGAGCATCTGCATTGAGATGCT GACACGGCCGCGGCTGCTTTTCCTCGACGAGCCCACCAGCGGGCTGGATAGCGCCGCCTC CTACCACGTCATGAGCCACATCACCCGGGTCGCTGCCAGGGAAGGGATGACTGTCATTGC CGCTGTGCACCAGCCCAGTGGCGACGTCTTTGACCTCTTCCATGGTCTCTTATTGCTAGC CTATGGGAGGATGGTATTCTTTGGGACAGTTTCTAATGCTACTGAGGTAATTAATTGACA CTCTTTTTGTATGCTATCTATTTTCACTGGAATTTTGACTTTTGATTAAAATTTTATTCA CAAAGATTTTAGATTTTAGGTACTACTTTTCCATCCAACCACCCCTCATTTAATTTTCAC CCGATTTTACACATAAACACGCTCCACTCATTAACTACCCCTCATTTAATGATGGACATT ATAGTCTTTTCCTTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6958#0      CTTCGCCCAGCTCGAGTCGTAGCACCAAAAGAAGCAAGCACGCCTAGCTCGTTATCGATC 60
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      ATGGCGGCCACGTCGCCACTGCCACGGTGGGCGCCGACGCCAAGTCCGTCGCGGCCGCTC 120
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      TGGCGCTGGGGCTGGGGCGGCGGCGCCACGCCGGACGCCCGGGCGGACGGAGGTGTCACC 180
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GGTTGGACCTCGTCGTTCTTCGCCGCCGTCTTCCCGTGGACGAGGAGACGACGTGTCGAT 240
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GACAGATGGGCGCCGTCGGCCGGCGGCGGAGTGGGGACGTTCGACGGCGTCGAGGTGCCG 300
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      CTGCCGGCGGCGCAGGCAGTTTCGCTTCCACGGGCGGCAGCGGACGTCGTCGACGACCCC 360
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GCGGTGTTCCTGACGTGGGAGGACGTGCGCGTGACGGTGCCCGGCCGCACTCGCGGCTCG 420
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      CCGCCGGCGAGGATCCTCGACGGGATCACCGGGCACGCGCGGCCGGGGGAGGTTCTGGCG 480
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      ATCATGGGGCCGTCGGGGTGCGGGAAGACGACGCTTCTTGACACTCTCGCAGGACGGTTA 540
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GGACAAGAAATGAATCAAACCGGTGTGATTTTAATAAATGGCCGGCAGGAAAAGCTTGCC 600
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      TTCGGAACCTCGGCATATGTAACCCAAGACAACGTGCTCATGTCGACTCTATCGGTGAGA 660
consensus_6958#1      -----------GGCATATGTAACCCAAGACAACGTGCTCATGTCGACTCTATCGGTGAGA 49
                                 *************************************************

consensus_6958#0      GAAGCCGTCTACTACTCGGCTCACCTGCAGCTACCTGACACGATGCTGGCGTCAGAGAAG 720
consensus_6958#1      GAAGCCGTCTACTACTCGGCTCACCTGCAGCTACCTGACACGATGCTGGCGTCAGAGAAG 109
                      ************************************************************

consensus_6958#0      CGCGCCCACGCGGAGCGTGTAATCCGGGAGATGGGGCTTAGCGACACCATGGACACGCGC 780
consensus_6958#1      CGCGCCCACGCGGAGCGTGTAATCCGGGAGATGGGGCTTAGCGACACCATGGACACGCGC 169
                      ************************************************************

consensus_6958#0      ATCGGCGGCCGTATCACCAAGGGCATCAGCGGCGGGCAGCGGAAGCGGATGAGCATCTGC 840
consensus_6958#1      ATCGGCGGCCGTATCACCAAGGGCATCAGCGGCGGGCAGCGGAAGCGGATGAGCATCTGC 229
                      ************************************************************

consensus_6958#0      ATTGAGATGCTGACACGGCCGCGGCTGCTTTTCCTCGACGAGCCCACCAGCGGGCTGGAT 900
consensus_6958#1      ATTGAGATGCTGACACGGCCGCGGCTGCTTTTCCTCGACGAGCCCACCAGCGGGCTGGAT 289
                      ************************************************************

consensus_6958#0      AGCGCCGCCTCCTACCACGTCATGAGCCACATCACCCGGGTCGCTGCCAGGGAAGGGATG 960
consensus_6958#1      AGCGCCGCCTCCTACCACGTCATGAGCCACATCACCCGGGTCGCTGCCAGGGAAGGGATG 349
                      ************************************************************

consensus_6958#0      ACTGTCATTGCCGCTGTGCACCAGCCCAGTGGCGACGTCTTTGACCTCTTCCATGGTCTC 1020
consensus_6958#1      ACTGTCATTGCCGCTGTGCACCAGCCCAGTGGCGACGTCTTTGACCTCTTCCATGGTCTC 409
                      ************************************************************

consensus_6958#0      TTATTGCTAGCCTATGGGAGGATGGTATTCTTTGGGACAGTTTCTAATGCTACTGAGTTT 1080
consensus_6958#1      TTATTGCTAGCCTATGGGAGGATGGTATTCTTTGGGACAGTTTCTAATGCTACTGAGGTA 469
                      ********************************************************* * 

consensus_6958#0      TTTACCCAA-AGTGGTTTTCCATGCCCAC-ACCTGAGGAACCCATCCGACCACTTCCTGA 1138
consensus_6958#1      ATTAATTGACACTCTTTTTGTATGCTATCTATTTTCACTGGAATTTTGACTTTTGATTAA 529
                       ***    * * *  ****  ****   * *  *          *  ***   *   * *

consensus_6958#0      GAACA-ATCAACAAGGACTTTGATGAGGGAACTATGGAAAGCTCCAAGGCTAACAGAAAA 1197
consensus_6958#1      AATTTTATTCACAAAGATTTTAG-------ATTTTAGGTA-CTACTTTTCCATCCAACCA 581
                       *    **  **** ** ***         * * * *  * ** *    * * *  *  *

consensus_6958#0      ACAGCAGCTGAAGCAACAAATATTCTAACAAATGCATACCACTCCACTTATTCAGAGAAA 1257
consensus_6958#1      CCCCTCATTTAATTTTCACCCGATTTTACACATAAACAC-GCTCCACTCATT-------A 633
                       *      * **    **     * * *** **  * **  ******* ***       *

consensus_6958#0      ACAGCCAATGAGATAGTTGAGATGAAAGGGATGGGTGGAACTCCATTTAGAAGGAAAGAG 1317
consensus_6958#1      ACTACCCCTCATTTAAT---GATGGACATTATAGTC---TTTTCCTTT------------ 675
                      **  **  * *  ** *   **** *    ** *       * * ***            

consensus_6958#0      CAAGCCAGCTTCTTGACAAAGCTCCTTGTGCTAACAAGAAGATCCTTCCTAAATATGCAC 1377
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      AGGGACATAGGCTACTACTGGATGCGTTTGGGCATTTATTTGGGCATTGGCATTTGCCTC 1437
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GGCACCATCTTCTACCAAGTTGGTTACAGCTACAGTTCTATCCAGAGTAGATGTGAAGTA 1497
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      ATAATGTATACAACCGCGCTTGTAACTTTCATGGCAATTGGAGGATTCCCTTCTTTCGTA 1557
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GAAGACATAAAGTTATTCAGAAGGGAGAGATTGAGCGGCCATTACGGAGTCATGGAATTT 1617
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GTAATCTCAAACACCCTCTCAGCCACCCCTTACCTTGCCGTCATCGCTGTGATCCCCGGA 1677
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GCAATGATGTATTACCTCACAGGGCTGACCCGAGGTGCGGAACACTTCGCATACTTCGTC 1737
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GCCACACTCTGCATGTGCACGCTGCTGGTAGAGAGCATGATGATGATCATCGCAGTCATC 1797
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GTCCCAGACTTCCTCATGGGAATCATCATCGGTGCCGGGATACAGGGCATGATGATGCTC 1857
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      AATGGTGGCTTCTTCCGCCTCCCGAACGAGCTCCCGAAGCCGGTGTGGAAGTACCCTTGC 1917
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      TACTACATCTCCTTCCACAAGTATGCGGTGCAGGGGTTTTACAAGAATGAGTTCATAGGG 1977
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      CTGTCTTTTCCAAGTGATCAGCTCATCGAGGCCAATGCCACTATCAGTGGTCTTCAGGTT 2037
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      CTCAAGGAAAGGCTGCAAGTGGAGATGGGCTATTCAAAGTGGGTAAACCTTGCTATCCTG 2097
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      TTTGGGATGATGGTGACATACAGGATGATATTCTTCGTTATTGTCAAGATTGCAGAGGAG 2157
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      CTCAGGCTAAAACTGAGAGGGATTAGATTTAGACGGCTTAAATAGTCGTCTTCTCTCTTG 2217
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      GAAAACCCGGCCAGGAGGAAGGGATCATTAAACACAAATAAAATTTGAAGTACAGAATGT 2277
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      ACTACAGTAGTGTGGACTTATGTCATTTGAGCTTGATAATTCCTAACGGGTATTTTCTGG 2337
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      CATTTTAGTCCTTTGCCAATGGAACAAAATTGTAAAGGATTTTTTAAGGTAAACCAAGTT 2397
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      ATCGTGAACGGTTCGTTGCACAGTGTTAAAGGGCTAACATTGCTCCTATCGCATCGGTGG 2457
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      TAAGATGTCATTTCTTCATATTTCAATTTTCTTAATGCCAAGTATTGCATTCCAAAAATG 2517
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      AATATATGGAGCAATAATGCCTAATGTAAGCACCGACATATTTTAATGTTCTTCCTGAAA 2577
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      AGTGACAGCAAGAGTGAAATGTGAAGAAATAATGAATATTTATACAGGTGATGTATTTAC 2637
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      AACGGCCTGGTTTGAAACTTTTCTTCTGGGAGAGAAAAAGTTTGGGACAATCCATATGAA 2697
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      AGGATTCTATAGANAAACAAATAAATGGTAGTAGAACGCATTGCTGTTTGAGATGTGTAC 2757
consensus_6958#1      ------------------------------------------------------------
                                                                                  

consensus_6958#0      ACCTTTAAGAAATAAGATATATACAAATACAATTCTCCACCTCAAA 2803
consensus_6958#1      ----------------------------------------------
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)