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Oryza sativa
cluster # 6962 cluster # 6962       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6962#0 length = 1735 sequences # 1  
consensus_6962#1 length = 1299 sequences # 3  

consensusID : consensus_6962#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1735
fasta sequence
                              [TTCACCTTGAGATAAACAATGCCGTTCATGCCCGAACAGAGCTGCTCCTCCTCCTCCTCGTCATCCCCGGCCACCGCCTCAAGCCGCCGTCTCTTCCTCTCCTCTTCCCGTCTCCTCCGCTGGCGTCAACCTCGAGTTCCTCGTCGTCAACGCGGCCACCGCAGGGGAGTAGGAGCTCCGGGCCGGCGCCGTCTCCCACACCGACGCCGAGGACGGCTGCGCCCCCGAGTGGCGCACGGTGGCGTCCCTCCTCCCATGCCGCATCGAGGAGGAGAAGGTGGCAGCGCCGGCGGTGGCCGCATCGAGGACGCCGCCCAGTCGAGCTCGAGGCCAGATCTGGAGTGCTCGAGGTCATCGCGACCTCCACAACGCACGGCAAGGGCGACGATGGCAAACACAACAGCGGTGGCGGCATCGACGGCGCGCGGAGCGAGGAGGACGCGGCGGAGCGAGATCCGCCGCTGTCGGCCATGGTCGCCGGCGTCGCGGGGTCGTCGCCGTCGCCAGGTCGTCTCCGTCGCGGGGTTGTCGTCGTCGCTGTTGAGGGTGGAAGAGGAAATTTGTGGTGCGGAGCTGTGTCCACGAGACACACGTCTAGCCACCGCGCGTCCAACGCGTAGCCTGGCGCCGTGGCTCAGCCAAAAGCGACTGAGGAACGCGTCCCCCTGCGAGCAAACGCGCGCCTACTCGGGGGGACGGCTCAGGCCGAAAAGCAAACGGGACGGCGACGCCGTGAGCTAGGGGAACGGCTCCAAGACACCCATTGCTTATGCTATAAGACTGTCTCCAACAAGTGACTCGTAAGGGCACCCAAACTCAAAATGGGTCTCCGATAGTATTATTTCAGCCTCTAACAGAGTACCTATACAGAAGACCCATTTTGCGTGCTATAAGAGGCATAACCTAAATCTGAGTATCCTCTCTCCTGAAGACCTATTTACAATAAGGGTTCTCTTTTAGGTCTTATTGTTGGAGAAGACTAAAAATAGGTATTGAACTCTTTGACTGTAGCGCTATGCAAACTTAAAATGGGTCTTGTATTTTGGGTTTTATTGTTGGAGATAGCCTAAGGTTTCATGAAACTTGTACAGGACTTGAGTGCTCAGCTTTGACTGGCGAGTGGTGACAATAAACAATCCAAGAGAAATGTGGGACTATATAATTAAATCCGTATGAACGCAACTAACATCTTCAACTAATATAGCACCTTACTTGCTAAAATTTATGAGATTTGTCTTTTTTTTTTATTTTGCTGATCATCTTCTCGGAGGAGTTGAAAACTTGTCAGATCACTCTTTTTTTTTTCTCCTTTTGCGACTCTAAAACACTTATGTGCCAGTCGGCAAAGGCCGAAGATATAAACCATTTCTATTATTTTAAAAGTTCAACCAACAATTTCGTTCTGCAGCCCTGACTCCTGCGTGGTCTTTCAAAGCTCCAACTTGTTAGTTCCAAGCACTTATAACTGGACTGAACCAAAACCAAAACCAAACAAAAAGAAAGTGGCAAATCCACACGTAATGTATAGTTGACCATACTGGAATTAAGCTGTTTTTTCTCCTATGTGGTTGCTTAAGGGCTTGCAATTAGTTAGTTGCCTCATTTTTCTAATATGCTCCCTCCGTTTCAGGTTATAAAATGTTTTGACTATAGTTAAAGCCAAACTATTTTATGTTTGTCCAAGTTTATAGAATAATATAGTAATATTTTTGACTCAAGATAAATTTATTATAAA]

[+] EMBL AK109722             [TTCACCTTGAGATAAACAATGCCGTTCATGCCCGAACAGAGCTGCTCCTCCTCCTCCTCGTCATCCCCGGCCACCGCCTCAAGCCGCCGTCTCTTCCTCTCCTCTTCCCGTCTCCTCCGCTGGCGTCAACCTCGAGTTCCTCGTCGTCAACGCGGCCACCGCAGGGGAGTAGGAGCTCCGGGCCGGCGCCGTCTCCCACACCGACGCCGAGGACGGCTGCGCCCCCGAGTGGCGCACGGTGGCGTCCCTCCTCCCATGCCGCATCGAGGAGGAGAAGGTGGCAGCGCCGGCGGTGGCCGCATCGAGGACGCCGCCCAGTCGAGCTCGAGGCCAGATCTGGAGTGCTCGAGGTCATCGCGACCTCCACAACGCACGGCAAGGGCGACGATGGCAAACACAACAGCGGTGGCGGCATCGACGGCGCGCGGAGCGAGGAGGACGCGGCGGAGCGAGATCCGCCGCTGTCGGCCATGGTCGCCGGCGTCGCGGGGTCGTCGCCGTCGCCAGGTCGTCTCCGTCGCGGGGTTGTCGTCGTCGCTGTTGAGGGTGGAAGAGGAAATTTGTGGTGCGGAGCTGTGTCCACGAGACACACGTCTAGCCACCGCGCGTCCAACGCGTAGCCTGGCGCCGTGGCTCAGCCAAAAGCGACTGAGGAACGCGTCCCCCTGCGAGCAAACGCGCGCCTACTCGGGGGGACGGCTCAGGCCGAAAAGCAAACGGGACGGCGACGCCGTGAGCTAGGGGAACGGCTCCAAGACACCCATTGCTTATGCTATAAGACTGTCTCCAACAAGTGACTCGTAAGGGCACCCAAACTCAAAATGGGTCTCCGATAGTATTATTTCAGCCTCTAACAGAGTACCTATACAGAAGACCCATTTTGCGTGCTATAAGAGGCATAACCTAAATCTGAGTATCCTCTCTCCTGAAGACCTATTTACAATAAGGGTTCTCTTTTAGGTCTTATTGTTGGAGAAGACTAAAAATAGGTATTGAACTCTTTGACTGTAGCGCTATGCAAACTTAAAATGGGTCTTGTATTTTGGGTTTTATTGTTGGAGATAGCCTAAGGTTTCATGAAACTTGTACAGGACTTGAGTGCTCAGCTTTGACTGGCGAGTGGTGACAATAAACAATCCAAGAGAAATGTGGGACTATATAATTAAATCCGTATGAACGCAACTAACATCTTCAACTAATATAGCACCTTACTTGCTAAAATTTATGAGATTTGTCTTTTTTTTTTATTTTGCTGATCATCTTCTCGGAGGAGTTGAAAACTTGTCAGATCACTCTTTTTTTTTTCTCCTTTTGCGACTCTAAAACACTTATGTGCCAGTCGGCAAAGGCCGAAGATATAAACCATTTCTATTATTTTAAAAGTTCAACCAACAATTTCGTTCTGCAGCCCTGACTCCTGCGTGGTCTTTCAAAGCTCCAACTTGTTAGTTCCAAGCACTTATAACTGGACTGAACCAAAACCAAAACCAAACAAAAAGAAAGTGGCAAATCCACACGTAATGTATAGTTGACCATACTGGAATTAAGCTGTTTTTTCTCCTATGTGGTTGCTTAAGGGCTTGCAATTAGTTAGTTGCCTCATTTTTCTAATATGCTCCCTCCGTTTCAGGTTATAAAATGTTTTGACTATAGTTAAAGCCAAACTATTTTATGTTTGTCCAAGTTTATAGAATAATATAGTAATATTTTTGACTCAAGATAAATTTATTATAAA]


>consensus_6962#0 TTCACCTTGAGATAAACAATGCCGTTCATGCCCGAACAGAGCTGCTCCTCCTCCTCCTCG TCATCCCCGGCCACCGCCTCAAGCCGCCGTCTCTTCCTCTCCTCTTCCCGTCTCCTCCGC TGGCGTCAACCTCGAGTTCCTCGTCGTCAACGCGGCCACCGCAGGGGAGTAGGAGCTCCG GGCCGGCGCCGTCTCCCACACCGACGCCGAGGACGGCTGCGCCCCCGAGTGGCGCACGGT GGCGTCCCTCCTCCCATGCCGCATCGAGGAGGAGAAGGTGGCAGCGCCGGCGGTGGCCGC ATCGAGGACGCCGCCCAGTCGAGCTCGAGGCCAGATCTGGAGTGCTCGAGGTCATCGCGA CCTCCACAACGCACGGCAAGGGCGACGATGGCAAACACAACAGCGGTGGCGGCATCGACG GCGCGCGGAGCGAGGAGGACGCGGCGGAGCGAGATCCGCCGCTGTCGGCCATGGTCGCCG GCGTCGCGGGGTCGTCGCCGTCGCCAGGTCGTCTCCGTCGCGGGGTTGTCGTCGTCGCTG TTGAGGGTGGAAGAGGAAATTTGTGGTGCGGAGCTGTGTCCACGAGACACACGTCTAGCC ACCGCGCGTCCAACGCGTAGCCTGGCGCCGTGGCTCAGCCAAAAGCGACTGAGGAACGCG TCCCCCTGCGAGCAAACGCGCGCCTACTCGGGGGGACGGCTCAGGCCGAAAAGCAAACGG GACGGCGACGCCGTGAGCTAGGGGAACGGCTCCAAGACACCCATTGCTTATGCTATAAGA CTGTCTCCAACAAGTGACTCGTAAGGGCACCCAAACTCAAAATGGGTCTCCGATAGTATT ATTTCAGCCTCTAACAGAGTACCTATACAGAAGACCCATTTTGCGTGCTATAAGAGGCAT AACCTAAATCTGAGTATCCTCTCTCCTGAAGACCTATTTACAATAAGGGTTCTCTTTTAG GTCTTATTGTTGGAGAAGACTAAAAATAGGTATTGAACTCTTTGACTGTAGCGCTATGCA AACTTAAAATGGGTCTTGTATTTTGGGTTTTATTGTTGGAGATAGCCTAAGGTTTCATGA AACTTGTACAGGACTTGAGTGCTCAGCTTTGACTGGCGAGTGGTGACAATAAACAATCCA AGAGAAATGTGGGACTATATAATTAAATCCGTATGAACGCAACTAACATCTTCAACTAAT ATAGCACCTTACTTGCTAAAATTTATGAGATTTGTCTTTTTTTTTTATTTTGCTGATCAT CTTCTCGGAGGAGTTGAAAACTTGTCAGATCACTCTTTTTTTTTTCTCCTTTTGCGACTC TAAAACACTTATGTGCCAGTCGGCAAAGGCCGAAGATATAAACCATTTCTATTATTTTAA AAGTTCAACCAACAATTTCGTTCTGCAGCCCTGACTCCTGCGTGGTCTTTCAAAGCTCCA ACTTGTTAGTTCCAAGCACTTATAACTGGACTGAACCAAAACCAAAACCAAACAAAAAGA AAGTGGCAAATCCACACGTAATGTATAGTTGACCATACTGGAATTAAGCTGTTTTTTCTC CTATGTGGTTGCTTAAGGGCTTGCAATTAGTTAGTTGCCTCATTTTTCTAATATGCTCCC TCCGTTTCAGGTTATAAAATGTTTTGACTATAGTTAAAGCCAAACTATTTTATGTTTGTC CAAGTTTATAGAATAATATAGTAATATTTTTGACTCAAGATAAATTTATTATAAA



consensusID : consensus_6962#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1299
fasta sequence
                              [TTTATTCAAGAGGCTCCATATTTTCATTGTGTTTGTGTAGCTTTTAGTTTGGGGGCATTTATTCTTTGGTTTGGCCCTAGAAACCAAAACCAATAACTCTTCTCAAAAGAACCACTAGTAGCTCACACAAACTAGTACAGGGGGAATTTATTCATCGTACTAGTCTAGTAGCTCTCTCTCTCACACACACAGAGAAATAGAGCTAGCTTGCTCGCTCTCTCTCTTTTCACCTTGAGATAAACAATGCCGTTCATGCCCGAGCAGAGCTGCTCCTCCTCCTCGCCATGCCGCTACATCCGGGGAGGACGCGCACGGCACGCCCAGCCTCCATGCCGTCGAGCAGAGCTGCTCCTCCTCCTCCTCGTCATCCCCGGCCACCGCCTCAAGCCGCCGTCTCTTCCTCTCCTCTTCCCGTCTCCTCCGCTGGCGTCAACCTCGAGTTCCTCGTCGTCAACGCGGCCACCGCGGGGGAGTAGGAGCTCCGGGCCGTCGCCGTCTCCCACACCGACGCTGAGGACGGCTGCGCCCCCGAGTGGCGCACGGTGGCGTCCCTCCTCCCATGCCGCATCGAGGAGGAGAAGGTGGCAGCGCCGGCGGTGGCCGCATCGAGGACGCCGCCCAGTCGAGCTCGAGGCCAGATCTGGAGTGCTCGAGGTCATCGCGACCTCCACAACGCACGGCAAGGGCGACGACGGCAAACACAACAGCGGTGGCGGCATCGACGGCGCGCGGAGCGAGGAGGACGCGGCGGAGCGAGATCCGCCGCTGTCGGCCATGGTCGCCGTCGTCGCGGGGTCGTCTCCGTCGCAGGGTTGTC-GTCGTCGCTGTTGAGGGTGGAAGAGGAAATTTGTGGTGCGGAGCTGTGTCCACGAGACACACGTCTAGCCACCGCGCGTCCAACGCGTAGCCTGGCGCCGTGGCTCAGCCAAAAGCGACTGAGGAACGCATCCCCCCGCGAGCAAACGCGCGCCTACGCGGGGGGACGGCTCAGGCCGAAAAGCAAACGGTACGGCGACGCCGTGAGCTAGGGGAACGGCTCCAAGACACCCATTGCTTATGCTCTAAGGCTAGTTTCACTGTTCCCGCGACAGAAAAAAAGATGTTTGGACAAAGATGGCTTCATAAACAGAATCAGATAATTTCTTCCAAATCACGAGTAACATACGGCATTCGGCATATTTTATTCATAAATCTGGAGCACGACAAACGGAAATAGAAACTAAGTAGCTTCAATATTCAAGAATGAGCATGTCTGATTGCATGACAATCTGCAGGAAATTTATTCCACAAACAACAAAA]

[-] EMBL AK111244             [TTTATTCAAGAGGCTCCATATTTTCATTGTGTTTGTGTAGCTTTTAGTTTGGGGGCATTTATTCTTTGGTTTGGCCCTAGAAACCAAAACCAATAACTCTTCTCAAAAGAACCACTAGTAGCTCACACAAACTAGTACAGGGGGAATTTATTCATCGTACTAGTCTAGTAGCTCTCTCTCTCACACACACAGAGAAATAGAGCTAGCTTGCTCGCTCTCTCTCTTTTCACCTTGAGATAAACAATGCCGTTCATGCCCGAGCAGAGCTGCTCCTCCTCCTCGCCATGCCGCTACATCCGGGGAGGACGCGCACGGCACGCCCAGCCTCCATGCCGTCGAGCAGAGCTGCTCCTCCTCCTCCTCGTCATCCCCGGCCACCGCCTCAAGCCGCCGTCTCTTCCTCTCCTCTTCCCGTCTCCTCCGCTGGCGTCAACCTCGAGTTCCTCGTCGTCAACGCGGCCACCGCGGGGGAGTAGGAGCTCCGGGCCGTCGCCGTCTCCCACACCGACGCTGAGGACGGCTGCGCCCCCGAGTGGCGCACGGTGGCGTCCCTCCTCCCATGCCGCATCGAGGAGGAGAAGGTGGCAGCGCCGGCGGTGGCCGCATCGAGGACGCCGCCCAGTCGAGCTCGAGGCCAGATCTGGAGTGCTCGAGGTCATCGCGACCTCCACAACGCACGGCAAGGGCGACGACGGCAAACACAACAGCGGTGGCGGCATCGACGGCGCGCGGAGCGAGGAGGACGCGGCGGAGCGAGATCCGCCGCTGTCGGCCATGGTCGCCGTCGTCGCGGGGTCGTCTCCGTCGCAGGGTTGTC GTCGTCGCTGTTGAGGGTGGAAGAGGAAATTTGTGGTGCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK111487             [                                  GTGTAGCTTTTAGTTTGGGGGCATTTATTCTTTGGTTTGGCCCTAGAAACCAAAACCAATAACTCTTCTCAAAAGAACCACTAGTAGCTCACACAAACTAGTACAGGGGGAATTTATTCATCGTACTAGTCTAGTAGCTCTCTCTCTCACACACACAGAGAAATAGAGCTAGCTTGCTCGCTCTCTCTCTTTTCACCTTGAGATAAACAATGCCGTTCATGCCCGAGCAGAGCTGCTCCTCCTCCTCGCCATGCCGCTACATCCGGGGAGGACGCGCACGGCACGCCCAGCCTCCATGCCGTCGAGCAGAGCTGCTCCTCCTCCTCCTCGTCATCCCCGGCCACCGCCTCAAGCCGCCGTCTCTTCCTCTCCTCTTCCCGTCTCCTCCGCTGGCGTCAACCTCGAGTTCCTCGTCGTCAACGCGGCCACCGCGGGGGAGTAGGAGCTCCGGGCCGTCGCCGTCTCCCACACCGACGCTGAGGACGGCTGCGCCCCCGAGTGGCGCACGGTGGCGTCCCTCCTCCCATGCCGCATCGAGGAGGAGAAGGTGGCAGCGCCGGCGGTGGCCGCATCGAGGACGCCGCCCAGTCGAGCTCGAGGCCAGATCTGGAGTGCTCGAGGTCATCGCGACCTCCACAACGCACGGCAAGGGCGACGACGGCAAACACAACAGCGGTGGCGGCATCGACGGCGCGCGGAGCGAGGAGGACGCGGCGGAGCGAGATCCGCCGCTGTCGGCCATGGTCGCCGTCGTCGCGGGGTCGTCTCCGTCGCAGGGTTGTC GTCGTCGCTGTTGAGGGTGGAAGAGGAAATTTGTGGTGCGGAGCTGTGTCCACGAGACACACGTCTAGCCACCGCGCGTCCAACGCGTAGCCTGGCGCCGTGGCTCAGCCAAAAGCGACTGAGGAACGCATCCCCCCGCGAGCAAACGCGCGCCTACGCGGGGGGACGGCTCAGGCCGAAAAGCAAACGGTACGGCGACGCCGTGAGCTAGGGGAACGGCTCCAAGACACCCATTGCTTATGCTCTAAGGCTAGTTTCACTGTTCCCGCGACAGAAAAAAAGATGTTTGGACAAAGATGGCTTCATAAACAGAATCAGAT                                                                                                                                                                  ]
[+] EMBL BI806763             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGCTGTCGGCCAT GTC CCGTCGTCGCGGGGTCGTCTCCGTCGCAGGGTTGTCTGTCGTCGCTGTTGAGGGTGGAAGAGGAAATTTGTGGT CGGAGCTGTGTCCACGAGACACACGTCTAGCCACCGCGCGTCC ACGCGTAGCCTGGCGCCGTGGCTCAGCCAAAAGCGACTGAGGAACGCATCCCCCCGCGAGCAAACGCGCGCCTACGCGGGGGGACGGCTCAGGCCGAAAAGCAAACGGTACGGCGACGCCGTGAGCTAGGGGAACGGCTCCAAGACACCCATTGCTTATGCTCTAAGGCTAGTTTCACTGTTCCCGCGACAGAAAAAAAGATGTTTGGACAAAGATGGCTTCATAAACAGAATCAGATAATTTCTTCCAAATCACGAGTAACATACGGCATTCGGCATATTTTATTCATAAATCTGGAGCACGACAAACGGAAATAGAAACTAAGTAGCTTCAATATTCAAGAATGAGCATGTCTGATTGCATGACAATCTGCAGGAAATTTATTCCACAAACAACAAAA]


>consensus_6962#1 TTTATTCAAGAGGCTCCATATTTTCATTGTGTTTGTGTAGCTTTTAGTTTGGGGGCATTT ATTCTTTGGTTTGGCCCTAGAAACCAAAACCAATAACTCTTCTCAAAAGAACCACTAGTA GCTCACACAAACTAGTACAGGGGGAATTTATTCATCGTACTAGTCTAGTAGCTCTCTCTC TCACACACACAGAGAAATAGAGCTAGCTTGCTCGCTCTCTCTCTTTTCACCTTGAGATAA ACAATGCCGTTCATGCCCGAGCAGAGCTGCTCCTCCTCCTCGCCATGCCGCTACATCCGG GGAGGACGCGCACGGCACGCCCAGCCTCCATGCCGTCGAGCAGAGCTGCTCCTCCTCCTC CTCGTCATCCCCGGCCACCGCCTCAAGCCGCCGTCTCTTCCTCTCCTCTTCCCGTCTCCT CCGCTGGCGTCAACCTCGAGTTCCTCGTCGTCAACGCGGCCACCGCGGGGGAGTAGGAGC TCCGGGCCGTCGCCGTCTCCCACACCGACGCTGAGGACGGCTGCGCCCCCGAGTGGCGCA CGGTGGCGTCCCTCCTCCCATGCCGCATCGAGGAGGAGAAGGTGGCAGCGCCGGCGGTGG CCGCATCGAGGACGCCGCCCAGTCGAGCTCGAGGCCAGATCTGGAGTGCTCGAGGTCATC GCGACCTCCACAACGCACGGCAAGGGCGACGACGGCAAACACAACAGCGGTGGCGGCATC GACGGCGCGCGGAGCGAGGAGGACGCGGCGGAGCGAGATCCGCCGCTGTCGGCCATGGTC GCCGTCGTCGCGGGGTCGTCTCCGTCGCAGGGTTGTCGTCGTCGCTGTTGAGGGTGGAAG AGGAAATTTGTGGTGCGGAGCTGTGTCCACGAGACACACGTCTAGCCACCGCGCGTCCAA CGCGTAGCCTGGCGCCGTGGCTCAGCCAAAAGCGACTGAGGAACGCATCCCCCCGCGAGC AAACGCGCGCCTACGCGGGGGGACGGCTCAGGCCGAAAAGCAAACGGTACGGCGACGCCG TGAGCTAGGGGAACGGCTCCAAGACACCCATTGCTTATGCTCTAAGGCTAGTTTCACTGT TCCCGCGACAGAAAAAAAGATGTTTGGACAAAGATGGCTTCATAAACAGAATCAGATAAT TTCTTCCAAATCACGAGTAACATACGGCATTCGGCATATTTTATTCATAAATCTGGAGCA CGACAAACGGAAATAGAAACTAAGTAGCTTCAATATTCAAGAATGAGCATGTCTGATTGC ATGACAATCTGCAGGAAATTTATTCCACAAACAACAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6962#0      ------------------------------------------------------------
consensus_6962#1      TTTATTCAAGAGGCTCCATATTTTCATTGTGTTTGTGTAGCTTTTAGTTTGGGGGCATTT 60
                                                                                  

consensus_6962#0      ------------------------------------------------------------
consensus_6962#1      ATTCTTTGGTTTGGCCCTAGAAACCAAAACCAATAACTCTTCTCAAAAGAACCACTAGTA 120
                                                                                  

consensus_6962#0      ------------------------------------------------------------
consensus_6962#1      GCTCACACAAACTAGTACAGGGGGAATTTATTCATCGTACTAGTCTAGTAGCTCTCTCTC 180
                                                                                  

consensus_6962#0      ------------------------------------------------------------
consensus_6962#1      TCACACACACAGAGAAATAGAGCTAGCTTGCTCGCTCTCTCTCTTTTCACCTTGAGATAA 240
                                                                                  

consensus_6962#0      ---------------------------------------------------TTCACCTTG 9
consensus_6962#1      ACAATGCCGTTCATGCCCGAGCAGAGCTGCTCCTCCTCCTCGCCATGCCGCTACATCCGG 300
                                                                         * ** *  *

consensus_6962#0      AGATAA-----ACAATGC------CGTTCATGCC--CGAACAGAGCTGCTCCTCCTCCTC 56
consensus_6962#1      GGAGGACGCGCACGGCACGCCCAGCCTCCATGCCGTCGAGCAGAGCTGCTCCTCCTCCTC 360
                       **  *     **    *      * * ******  *** ********************

consensus_6962#0      CTCGTCATCCCCGGCCACCGCCTCAAGCCGCCGTCTCTTCCTCTCCTCTTCCCGTCTCCT 116
consensus_6962#1      CTCGTCATCCCCGGCCACCGCCTCAAGCCGCCGTCTCTTCCTCTCCTCTTCCCGTCTCCT 420
                      ************************************************************

consensus_6962#0      CCGCTGGCGTCAACCTCGAGTTCCTCGTCGTCAACGCGGCCACCGCAGGGGAGTAGGAGC 176
consensus_6962#1      CCGCTGGCGTCAACCTCGAGTTCCTCGTCGTCAACGCGGCCACCGCGGGGGAGTAGGAGC 480
                      ********************************************** *************

consensus_6962#0      TCCGGGCCGGCGCCGTCTCCCACACCGACGCCGAGGACGGCTGCGCCCCCGAGTGGCGCA 236
consensus_6962#1      TCCGGGCCGTCGCCGTCTCCCACACCGACGCTGAGGACGGCTGCGCCCCCGAGTGGCGCA 540
                      ********* ********************* ****************************

consensus_6962#0      CGGTGGCGTCCCTCCTCCCATGCCGCATCGAGGAGGAGAAGGTGGCAGCGCCGGCGGTGG 296
consensus_6962#1      CGGTGGCGTCCCTCCTCCCATGCCGCATCGAGGAGGAGAAGGTGGCAGCGCCGGCGGTGG 600
                      ************************************************************

consensus_6962#0      CCGCATCGAGGACGCCGCCCAGTCGAGCTCGAGGCCAGATCTGGAGTGCTCGAGGTCATC 356
consensus_6962#1      CCGCATCGAGGACGCCGCCCAGTCGAGCTCGAGGCCAGATCTGGAGTGCTCGAGGTCATC 660
                      ************************************************************

consensus_6962#0      GCGACCTCCACAACGCACGGCAAGGGCGACGATGGCAAACACAACAGCGGTGGCGGCATC 416
consensus_6962#1      GCGACCTCCACAACGCACGGCAAGGGCGACGACGGCAAACACAACAGCGGTGGCGGCATC 720
                      ******************************** ***************************

consensus_6962#0      GACGGCGCGCGGAGCGAGGAGGACGCGGCGGAGCGAGATCCGCCGCTGTCGGCCATGGTC 476
consensus_6962#1      GACGGCGCGCGGAGCGAGGAGGACGCGGCGGAGCGAGATCCGCCGCTGTCGGCCATGGTC 780
                      ************************************************************

consensus_6962#0      GCCGGCGTCGCGGGGTCGTCGCCGTCGCCAGGTCGTCTCCGTCGCGGGGTTGTCGTCGTC 536
consensus_6962#1      GCCGTCGTCGCGGGGTCGTC-----------------TCCGTCGCAGGGTTGTCGTCGTC 823
                      **** ***************                 ******** **************

consensus_6962#0      GCTGTTGAGGGTGGAAGAGGAAATTTGTGGTGCGGAGCTGTGTCCACGAGACACACGTCT 596
consensus_6962#1      GCTGTTGAGGGTGGAAGAGGAAATTTGTGGTGCGGAGCTGTGTCCACGAGACACACGTCT 883
                      ************************************************************

consensus_6962#0      AGCCACCGCGCGTCCAACGCGTAGCCTGGCGCCGTGGCTCAGCCAAAAGCGACTGAGGAA 656
consensus_6962#1      AGCCACCGCGCGTCCAACGCGTAGCCTGGCGCCGTGGCTCAGCCAAAAGCGACTGAGGAA 943
                      ************************************************************

consensus_6962#0      CGCGTCCCCCTGCGAGCAAACGCGCGCCTACTCGGGGGGACGGCTCAGGCCGAAAAGCAA 716
consensus_6962#1      CGCATCCCCCCGCGAGCAAACGCGCGCCTACGCGGGGGGACGGCTCAGGCCGAAAAGCAA 1003
                      *** ****** ******************** ****************************

consensus_6962#0      ACGGGACGGCGACGCCGTGAGCTAGGGGAACGGCTCCAAGACACCCATTGCTTATGCTAT 776
consensus_6962#1      ACGGTACGGCGACGCCGTGAGCTAGGGGAACGGCTCCAAGACACCCATTGCTTATGCTCT 1063
                      **** ***************************************************** *

consensus_6962#0      AAGACTGTCTCCAACAAGTGACTCGTAAGGGCACCCAAACTCAAAATGGGTCTCCGATAG 836
consensus_6962#1      AAGGCTAGTTTCACTGTT---CCCGCGACAG-----AAA---AAAAGATGTTTGGACAAA 1112
                      *** **   * **        * **  *  *     ***   ****   ** *     * 

consensus_6962#0      TATTATTTCAGCCTCTAACAGAGTACCTATACAGAAGACCCATTTTGCGTGCTATAAGAG 896
consensus_6962#1      GATGGCTTCA----TAAACAGAAT-CAGATA-ATTTCTTCCAAATCACGAGTAACATACG 1166
                       **   ****      ****** * *  *** *      ***  *  ** *  * *   *

consensus_6962#0      GCATAACCTAAATCTGAGTATCCTCTCTCCTGAAGACCTATTTACAATAAGGGTTCTCTT 956
consensus_6962#1      GCATTCGGCATATTT---TATTCATAAATCTGGAGCACGACAAACGGAAATAGAAACTAA 1223
                      ****     * ** *   *** *      *** **  * *   **   **  *       

consensus_6962#0      TTAGGTCTTATTGTTGGAGAAGACTAAAAATAGGTATTGAACTCTTTGACTGTAGCGCTA 1016
consensus_6962#1      GTAGCTTCAATATTCAAGAATGAGCATGTCTGATTGCATGACAATCTGCAGGAAATTTAT 1283
                       *** *   **  *     * **  *    *   *     **  * **   * *      

consensus_6962#0      TGCAAACTTAAAATGGGTCTTGTATTTTGGGTTTTATTGTTGGAGATAGCCTAAGGTTTC 1076
consensus_6962#1      TCCACAAACAACAAAA-------------------------------------------- 1299
                      * ** *   ** *                                               

consensus_6962#0      ATGAAACTTGTACAGGACTTGAGTGCTCAGCTTTGACTGGCGAGTGGTGACAATAAACAA 1136
consensus_6962#1      ------------------------------------------------------------
                                                                                  

consensus_6962#0      TCCAAGAGAAATGTGGGACTATATAATTAAATCCGTATGAACGCAACTAACATCTTCAAC 1196
consensus_6962#1      ------------------------------------------------------------
                                                                                  

consensus_6962#0      TAATATAGCACCTTACTTGCTAAAATTTATGAGATTTGTCTTTTTTTTTTATTTTGCTGA 1256
consensus_6962#1      ------------------------------------------------------------
                                                                                  

consensus_6962#0      TCATCTTCTCGGAGGAGTTGAAAACTTGTCAGATCACTCTTTTTTTTTTCTCCTTTTGCG 1316
consensus_6962#1      ------------------------------------------------------------
                                                                                  

consensus_6962#0      ACTCTAAAACACTTATGTGCCAGTCGGCAAAGGCCGAAGATATAAACCATTTCTATTATT 1376
consensus_6962#1      ------------------------------------------------------------
                                                                                  

consensus_6962#0      TTAAAAGTTCAACCAACAATTTCGTTCTGCAGCCCTGACTCCTGCGTGGTCTTTCAAAGC 1436
consensus_6962#1      ------------------------------------------------------------
                                                                                  

consensus_6962#0      TCCAACTTGTTAGTTCCAAGCACTTATAACTGGACTGAACCAAAACCAAAACCAAACAAA 1496
consensus_6962#1      ------------------------------------------------------------
                                                                                  

consensus_6962#0      AAGAAAGTGGCAAATCCACACGTAATGTATAGTTGACCATACTGGAATTAAGCTGTTTTT 1556
consensus_6962#1      ------------------------------------------------------------
                                                                                  

consensus_6962#0      TCTCCTATGTGGTTGCTTAAGGGCTTGCAATTAGTTAGTTGCCTCATTTTTCTAATATGC 1616
consensus_6962#1      ------------------------------------------------------------
                                                                                  

consensus_6962#0      TCCCTCCGTTTCAGGTTATAAAATGTTTTGACTATAGTTAAAGCCAAACTATTTTATGTT 1676
consensus_6962#1      ------------------------------------------------------------
                                                                                  

consensus_6962#0      TGTCCAAGTTTATAGAATAATATAGTAATATTTTTGACTCAAGATAAATTTATTATAAA 1735
consensus_6962#1      -----------------------------------------------------------
                                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)