cluster # 6964

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Oryza sativa
cluster # 6964 cluster # 6964 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6964#0 length = 2063 sequences # 4
consensusID : consensus_6964#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2063
fasta sequence
                              [GTCTCTTCGCCTCCGCGGCCTCCTCCTCCTCCCTCTCCTCCGCCGCCGCAGCTGCTCCCCTCTCCTCCT---CCGCCGCCGCCGCCTCCTTCGCGGTTGGCCTCCGCCGCTCGTCTCAGCGATCCCATCTAGAGCCTTCGGTTCCTCCGGCTTACCCGCCCGAGCCTGCGCTTCCTCCGGCTTCTCGGGCATGGCGGCGGTGTCTCCGCCGACGCCGC--C-GCAGCAGCAGCGGTGCGTGGTGGAGGTGAGGGAGGGCGTGGAGCTGACGGAGAAGGAGGAGCGGATCTTCCGTCGCCTGCTCGATGTCGTCCGCCACTTCGGCCTCGGCACCCAGCTCCGCGTCGCCGGCGGCTGGGTCAGGGACAAGCTATTGGGGAAAGACTCCACTGACATTGATATTGCACTTGATAATATGACGGGCCAGAATTTCTGCGAGAAAGTAAATGAGTATTCAGAATTATTGGGTGAGGAACAGAAAGGAATTGGCGTTATTCAGTGCAATCCTGATCAATCAAAGCACTTGGAAACTGCAAGGATGCTTATATTCGACATTTGGATTGACTTTGTCAACTTGAGGTCTGAAAAATATGCTGAAAACAGTCGGATTCCTACCGTGGAGATTGGTACAGCCAAAGAAGATGCATTCCGTAGGGACCTAACAATAAATAGTTTATTCTTCAATATCAACACTAACACAGTGGAAGATTTAACCGGAAGAGGTATTGAAGATCTGAAAAAGGGTCTTATTGTTACTCCTTTACCTGCCAAAGCTACCTTCTTGGATGACCCCCTTAGAGTTCTTCGAGCAATCCGATTTGCTGCTAGA-TCAACTTTACATTAACTGAAGATTTGAAAGATGCTGCTTCTGATGAAAAGGTGAAGTCTGAACTTGGTAGCAAGATTAGCAAAGAGCGCATCGGTCATGAGGTAGATCTTATGATGTCAGACAAACATCCTGTTAATGCAATGTGTTATATTCGTGATTTGGGGTTATTTTATGTTGTCTTTGCTTTTCCTGAGAAGCCCGACCCTCCAGTTCCTGACAAATGTGACCGGCTTTGTGTTTCACATATTGAAGTTGCATGGAATCTTGCTCATTCTATTGGCTGCTCTGTGTTCAGTGGTGGTTCTGATTCCAAGTCACAGGATGAGCACCGAAGGCTTTGCTTTTATAGTGCACTATTCACTCCTGTTCGGAATACAATATATTTGGATAAAAAGTCGAAGAAGATTCCTGTCACTAACTATATTATTCGTGACTCTCTGAAGTTAAAAGCTAGTGATGCTGACACGGTTGTCAACGTACATGCTGCAAGTGAAAAGTTTGCTGAATTAATTAATCTCCTTGAGTCGAATGAAAATCTGACAACTGTGAAAGAGAAATTGGATGATGAATACCTTGAGATCCCAACAGACTCAGTTAAACGTGTTTTGGCAGGGCTTATACTTCGGGAGATAAAGGACTTTTGGCGTGTGGCACTGTTTATCTGCACTCTTACCTACCCGGAGGTTAGCAGTGGTGGTGATTCTCTCGGCCAGCCAGACGAATTACATCAAAGGAAAGAAAAATACACAAGAGCTGAACGTTTAATAACTGAACTGGAGCTTGATGGCGTATGGAAGATGAAACCGTTGCTTGATGGGAAGGCCATTATGGGGATTATGCAGGTCAAGGGAGGTCCACTTATCGGAAAATGGCAACAACGACTGTTGAAGTGGCAGCTTGCTTATCCAAGGGGAACCACGGAGGAGTGCATCGAGTGGATGAAGCAGTCGCAGTCGAAACGGCAAAAAGTATAGCGCAACACCTGAGAATCTTCTGCCACATCAACATTTTGCTGGAGCATTGGCAGCCTTCAGAATTCTGATAGGGCACAAACTTAACTTCCCAAGTTCCTAGGAGTGCAGCGTTATCTTGCGTGACATGTAACAGCGCGTTGTTAGGAGTATAGCTTTATCTTGGCCGTCTTCTCTTCCGGGTATCCATGGTTGAAATTTGCAAAATTTTGTGGTCGAATATACTGTACTGTTATACCCTATGATGAAAGAGGAAAATACTTAGTGTA]

[+] EMBL CB620799             [GTCTCTTCGCCTCCGCGGCCTCCTCCTCCTCCCTCTCCTCCGCCGCCGCAGCTGCTCCCCTCTCCTCCT   CCGCCGCCGCCGCCTCCTTCGCGGTTGGCCTCCGCCGCTCGTCTCAGCGATCCCATCTAGAGCCTTCTGTTCCTCCGGCTTACCCGCCCGAGCCTGCGCTTCCTCCGGCTTCTCGGGCATGGCGGCGGTGTCTCCGCCGACGCCGC  C GCAGCAGCAGCGGTGCGTGGTGGAGGTGAGGGAGGGCGTGGAGCTGACGGAGAAGGAGGAGCGGATCTTCCGTCGCCTGCTCGATGTCATCCGCCACTTCGGCCTCGGCACCCAGCTCCGCGTCGCCGGCGGCTGGGTCAGGGACAAGCTATTGGGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB632311             [                GGCCTCCTCCTCCTCCCTCTCCTCCGCCGCCGCAGCTGCTCCCCTCTCCTCCTCCGCCGCCGCCGCCGCCTCCTTCGCGGTTGGCCTCCGCCGCTCGTCTCAGCGATCCCATCTAGAGCCTTCGGTTCCTCCGGCTTACCCGCCCGAGCCTGCGCTTCCTCCGGCTTCTCGGGCATGGCGGCGGTGTCTCCGCCGACGCCGC  C GCAGCAGCAGCGGTGCGTGGTGGAGGTGAGGGAGGGCGTGGAGCTGACGGAGAAGGAGGAGCGGATCTTCCGTCGCCTGCTCGATGTCGTCCGCCACTTCGGCCTCGGCACCCAGCTCCGCGTCGCCGGCGGCTGGGTCAGGGACAAGCTATTGGGGAAAGACTCCACTGACATTGATATTGCACTTGATAATATGACGGGCCAGAATTTCTGCGAGAAAGTAAATGAGTATTCAGAATTATTGGGTGAGGAACAGAAAGGAATTGGCGTTATTCAGTGCAATCCTGATCAATCAAAGCACTTGGAAACTGCAAGGATGCTTATATTCGACATTTGGATTGACTTTGTCAACTTGAGGTCTGAAAAATATGCTGAAAACAGTCGGATTCCTACCGTGGAGATTGGTACAGCCAAAGAAGATGCATTCCGTAGGGACCTAACAATAAATAGTTTATTCTTCAATATCAACACTAACACAGTGGAAGATTTAACCGGAAGAGGTATTGAAGATCTGAAAAAGGGTCTTATTGTTACTCCTTTACCTGCCAAAGCTACCTTCTTGGATGACCCCCTTAGAGTTCTTCGAGCAATCCGATTTGCTGCTAGA TCAACTTTACATTAACTGAAGATTTGAAAGATGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK107402             [                         ccCCTCCCTCTCCTCCGCCGCCGCAGCTGCTCCCCTCTCCTCCT   CCGCCGCCGCCGCCTCCTTCGCGGTTGGCCTCCGCCGCTCGTCTCAGCGATCCCATCTAGAGCCTTCGGTTCCTCCGGCTTACCCGCCCGAGCCTGCGCTTCCTCCGGCTTCTCGGGCATGGCGGCGGTGTCTCCGCCGACGCCGCAGCAGCAGCAGCAGCGGTGCGTGGTGGAGGTGAGGGAGGGCGTGGAGCTGACGGAGAAGGAGGAGCGGATCTTCCGTCGCCTGCTCGATGTCGTCCGCCACTTCGGCCTCGGCACCCAGCTCCGCGTCGCCGGCGGCTGGGTCAGGGACAAGCTATTGGGGAAAGACTCCACTGACATTGATATTGCACTTGATAATATGACGGGCCAGAATTTCTGCGAGAAAGTAAATGAGTATTCAGAATTATTGGGTGAGGAACAGAAAGGAATTGGCGTTATTCAGTGCAATCCTGATCAATCAAAGCACTTGGAAACTGCAAGGATGCTTATATTCGACATTTGGATTGACTTTGTCAACTTGAGGTCTGAAAAATATGCTGAAAACAGTCGGATTCCTACCGTGGAGATTGGTACAGCCAAAGAAGATGCATTCCGTAGGGACCTAACAATAAATAGTTTATTCTTCAATATCAACACTAACACAGTGGAAGATTTAACCGGAAGAGGTATTGAAGATCTGAAAAAGGGTCTTATTGTTACTCCTTTACCTGCCAAAGCTACCTTCTTGGATGACCCCCTTAGAGTTCTTCGAGCAATCCGATTTGCTGCTAGATTCAACTTTACATTAACTGAAGATTTGAAAGATGCTGCTTCTGATGAAAAGGTGAAGTCTGAACTTGGTAGCAAGATTAGCAAAGAGCGCATCGGTCATGAGGTAGATCTTATGATGTCAGACAAACATCCTGTTAATGCAATGTGTTATATTCGTGATTTGGGGTTATTTTATGTTGTCTTTGCTTTTCCTGAGAAGCCCGACCCTCCAGTTCCTGACAAATGTGACCGGCTTTGTGTTTCACATATTGAAGTTGCATGGAATCTTGCTCATTCTATTGGCTGCTCTGTGTTCAGTGGTGGTTCTGATTCCAAGTCACAGGATGAGCACCGAAGGCTTTGCTTTTATAGTGCACTATTCACTCCTGTTCGGAATACAATATATTTGGATAAAAAGTCGAAGAAGATTCCTGTCACTAACTATATTATTCGTGACTCTCTGAAGTTAAAAGCTAGTGATGCTGACACGGTTGTCAACGTACATGCTGCAAGTGAAAAGTTTGCTGAATTAATTAATCTCCTTGAGTCGAATGAAAATCTGACAACTGTGAAAGAGAAATTGGATGATGAATACCTTGAGATCCCAACAGACTCAGTTAAACGTGTTTTGGCAGGGCTTATACTTCGGGAGATAAAGGACTTTTGGCGTGTGGCACTGTTTATCTGCACTCTTACCTACCCGGAGGTTAGCAGTGGTGGTGATTCTCTCGGCCAGCCAGACGAATTACATCAAAGGAAAGAAAAATACACAAGAGCTGAACGTTTAATAACTGAACTGGAGCTTGATGGCGTATGGAAGATGAAACCGTTGCTTGATGGGAAGGCCATTATGGGGATTATGCAGGTCAAGGGAGGTCCACTTATCGGAAAATGGCAACAACGACTGTTGAAGTGGCAGCTTGCTTATCCAAGGGGAACCACGGAGGAGTGCATCGAGTGGATGAAGCAGTCGCAGTCGAAACGGCAAAAAGTATAGCGCAACACCTGAGAATCTTCTGCCACATCAACATTTTGCTGGAGCATTGGCAGCCTTCAGAATTCTGATAGGGCACAAACTTAACTTCCCAAGTTCCTAGGAGTGCAGCGTTATCTTGCGTGACATGTAACAGCGCGTTGTTAGGAGTATAGCTTTATCTTGGCCGTCTTCTCTTCCGGGTATCCATGGTTGAAATTTGCAAAATTTTGTGGTCGAATATACTGTACTGTTATACCCTATGATGAAAGAGGAAAATACTTAGTGTA]
[-] EMBL CB620800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGTTTGCTGAATTAATTAATCTCCTTGAGTCGAATGAAAATCTGACAACTGTGAAAGAGAAATTGGATGATGAATACCTTGAGATCCCAACAGACTCAGTTAAACGTGTTTTGGCAGGGCTTATACTTCGGGAGATAAAGGACTTTTGGCGTGTGGCACTGTTTATCTGCACTCTTACCTACCCGGAGGTTAGCAGTGGTGGTGATCCTCTCGGCCAGCCAGACGAATTACATCAAAGGAAAGAAAAATACCCAAGAGCTGAACGTTTAATAACTGAACTGGAGCTTGATGCCGTATGGAAGATGAAACCGTTGCTTGATGGGAAGGCCATTATGGGGATTATGCAGGTCAAGGGAGGTCCACTTATCGGAAAATGGCAACAACGACTGTTGAAGTGGCAGCTTGCTTATCCAAGGGGAACCACGGAGGAGTGCATCGAGTGGATGAAGCAGTCGCAGTCAAAACGGCAAAAAGTATAGCGCAACCCCTGAGAATCTTCTGCCACATCAACATTTTGCTGGAGCATTGGCAGTCTTCAGAATTCTGATAGGGCACAAACTTAACTTCCCAAGTTCCTAGGAGTGCAGCGTTATCTTGCTTGACATGTAACAACGCGTTGTTAGGAGTATAGCTTTATCTTGGCCGTCTTCTCTTCCGGGTATCCATGGTTGAAATTTGCAAAATTTTGTGGTCGAATATACTGTACTGTTATCCCCTATGATGAAAGAGGAAAATACTTAGTG  ]




>consensus_6964#0
GTCTCTTCGCCTCCGCGGCCTCCTCCTCCTCCCTCTCCTCCGCCGCCGCAGCTGCTCCCC
TCTCCTCCTCCGCCGCCGCCGCCTCCTTCGCGGTTGGCCTCCGCCGCTCGTCTCAGCGAT
CCCATCTAGAGCCTTCGGTTCCTCCGGCTTACCCGCCCGAGCCTGCGCTTCCTCCGGCTT
CTCGGGCATGGCGGCGGTGTCTCCGCCGACGCCGCCGCAGCAGCAGCGGTGCGTGGTGGA
GGTGAGGGAGGGCGTGGAGCTGACGGAGAAGGAGGAGCGGATCTTCCGTCGCCTGCTCGA
TGTCGTCCGCCACTTCGGCCTCGGCACCCAGCTCCGCGTCGCCGGCGGCTGGGTCAGGGA
CAAGCTATTGGGGAAAGACTCCACTGACATTGATATTGCACTTGATAATATGACGGGCCA
GAATTTCTGCGAGAAAGTAAATGAGTATTCAGAATTATTGGGTGAGGAACAGAAAGGAAT
TGGCGTTATTCAGTGCAATCCTGATCAATCAAAGCACTTGGAAACTGCAAGGATGCTTAT
ATTCGACATTTGGATTGACTTTGTCAACTTGAGGTCTGAAAAATATGCTGAAAACAGTCG
GATTCCTACCGTGGAGATTGGTACAGCCAAAGAAGATGCATTCCGTAGGGACCTAACAAT
AAATAGTTTATTCTTCAATATCAACACTAACACAGTGGAAGATTTAACCGGAAGAGGTAT
TGAAGATCTGAAAAAGGGTCTTATTGTTACTCCTTTACCTGCCAAAGCTACCTTCTTGGA
TGACCCCCTTAGAGTTCTTCGAGCAATCCGATTTGCTGCTAGATCAACTTTACATTAACT
GAAGATTTGAAAGATGCTGCTTCTGATGAAAAGGTGAAGTCTGAACTTGGTAGCAAGATT
AGCAAAGAGCGCATCGGTCATGAGGTAGATCTTATGATGTCAGACAAACATCCTGTTAAT
GCAATGTGTTATATTCGTGATTTGGGGTTATTTTATGTTGTCTTTGCTTTTCCTGAGAAG
CCCGACCCTCCAGTTCCTGACAAATGTGACCGGCTTTGTGTTTCACATATTGAAGTTGCA
TGGAATCTTGCTCATTCTATTGGCTGCTCTGTGTTCAGTGGTGGTTCTGATTCCAAGTCA
CAGGATGAGCACCGAAGGCTTTGCTTTTATAGTGCACTATTCACTCCTGTTCGGAATACA
ATATATTTGGATAAAAAGTCGAAGAAGATTCCTGTCACTAACTATATTATTCGTGACTCT
CTGAAGTTAAAAGCTAGTGATGCTGACACGGTTGTCAACGTACATGCTGCAAGTGAAAAG
TTTGCTGAATTAATTAATCTCCTTGAGTCGAATGAAAATCTGACAACTGTGAAAGAGAAA
TTGGATGATGAATACCTTGAGATCCCAACAGACTCAGTTAAACGTGTTTTGGCAGGGCTT
ATACTTCGGGAGATAAAGGACTTTTGGCGTGTGGCACTGTTTATCTGCACTCTTACCTAC
CCGGAGGTTAGCAGTGGTGGTGATTCTCTCGGCCAGCCAGACGAATTACATCAAAGGAAA
GAAAAATACACAAGAGCTGAACGTTTAATAACTGAACTGGAGCTTGATGGCGTATGGAAG
ATGAAACCGTTGCTTGATGGGAAGGCCATTATGGGGATTATGCAGGTCAAGGGAGGTCCA
CTTATCGGAAAATGGCAACAACGACTGTTGAAGTGGCAGCTTGCTTATCCAAGGGGAACC
ACGGAGGAGTGCATCGAGTGGATGAAGCAGTCGCAGTCGAAACGGCAAAAAGTATAGCGC
AACACCTGAGAATCTTCTGCCACATCAACATTTTGCTGGAGCATTGGCAGCCTTCAGAAT
TCTGATAGGGCACAAACTTAACTTCCCAAGTTCCTAGGAGTGCAGCGTTATCTTGCGTGA
CATGTAACAGCGCGTTGTTAGGAGTATAGCTTTATCTTGGCCGTCTTCTCTTCCGGGTAT
CCATGGTTGAAATTTGCAAAATTTTGTGGTCGAATATACTGTACTGTTATACCCTATGAT
GAAAGAGGAAAATACTTAGTGTA
clustalw multiple alignements is not computed in this case