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Oryza sativa
cluster # 6970 cluster # 6970       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6970#0 length = 3382 sequences # 3  
 consensus_6970#1 length = 676 sequences # 1  
consensusID : consensus_6970#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3382
fasta sequence 
                              [AGCTGTATGAAATAATATACCGAATTTAGGCTGCTTCCTGATTTCACTCTGTATCATCTTGGAATTAAATTTAGGATTTGGTCCTGCCGACAATACCCATAATTAGTCCAACTCCAGCACGCCGGATTGCCGGAAGGTTGGCGACGCGTTATCATTGCCCAGGCCTGCTGCCCCTTCTCCCCTCCTTCTCCTTGGTGAATCGTCGGCGATGGATATCGCTCTTGCTTCTGCGGCGGCGACATGGCTGATCAACAAGCTCCTGGACCGGCTGAGCGACTATGCCATCAAGAAGCTGCTGGGCTCGGAGGGCCTGGACGCGGAGGCCAGCTCCCTCAGGGATGCGCTGCGGCGAGCCACGCTCGTCCTCGGCGCCGTGCCCGCCGGTGCCGCCGCAGGGGTCAGGATTGGGAACGACCAGCTACTTCCGCAGATCGACCTGGTTCAGCGGCTAGCCACCGATTTGGCCAGGCACCTCGACGAGCTCGAGTACTACGACGTCAAGAAAAAGGTAAAGAAGAACCAGAAGAGCAGCAATCCATTATCCAAAATGAATTTACCCCTTACTCAAGCTGGGCAATCAAAGCCGAAGTACAATAGAACAGACATAAAACAGATTAGAGATACTGTGGGATATTTGCATAGCATTTGTGATGATGTTCACAAGGCTCTCTTGCTAGATAAACTTGATGCAATTAAACAAGCTGCTCAAGATGCAAGTACAGACAAACGTGAGACTGTGGATAACTTCACTGAAAATCCTAGAAATAAGGTGTTCCCAAGGGAAGAAATGAAAGATATTATAGAACTAATTAATAGTGCTGCATCGAGTGATCAAGAACTTTTAGTTGTTCCAATAGTTGGTGCTGGTGGTGTTGGGAAGACAACACTTGCTCGATTGGTGTACCATGACCCAGAAGTAAAAGATAAATTTGACATCATGCTCTGGATCTACGTATCTGCTAACTTTGATGAAGTTAAGCTTACACAAGGGATTCTGGAACAAATACCTGAATGTGAGTTCAAAAGCGCCAAGAATCTCACTGTGCTTCAGCGTGGTATCAACAAATATTTGACCAAAAGATTTCTGCTTGTTCTGGATGACATGTGGGAAGAGAGTGAGGGTCGTTGGGACAAGTTATTGGCCCCACTTAGATCCGCACAGGCTAAGGGTAACGTACTCTTGGTAACTACTCGGAAGTTATCGGTGGCTAGGATAACTAGCAACACAGAAGCACACATTGACTTGGATGGTATGAAAAAAGATGACTTCTGGTTATTCTTCAAAAGATGCATATTTGGTGATGAAAACTATCAAGGCCAAAGGAAGCTACAGAATATTGCTAAGAAAATAGCCACCAGACTGAATGGCAATCCATTGGCAGCAAAAAGTGTTGGTACACTTTTGAGAAGAAATATTAATGAGGATTACTGGACAAGAATTCTAGATAGCAATGAATGGAAGTTACAAGAAAGTATTGATGACATTATACCTGCACTAAAGCTCAGTTACAATCAGCTTCCCTATCGTCTTCAGCTACTCTTCAGTTACTGTGCTATGTTTCCAAAGGGTTACAATTTTGACAAAGGACAGTTGATATGTACATGGATTGCTCTGGGATTTGTCATGAATGAGAGAAAGAAATTGGAGGATGAAGGAAGTGACTGTTTTGATGATTTGGTAGACCGAAGCTTTTTCCAGAAATATGGAGTGTCACAGTATTATACTGTGCATGATTTAATGCATGATGTTGCACAAGAAGTCTCCATTAACAAATGCCTTATTATTGATGGGTCAGATCTTCGAACAGTTCCGTCGTCCATTTGTCACCTTAGCATCTGGACTGAGCCGGTGTACAATGAGCAAAGCATAGAACGGAATGATAACTTTGAAGAGAAGTTAGATGCAGTCCAGGATAATGTCTTGGGAAGCTTGGAGTGTTTAATTCTTGCAGGTGTATATGATGAGAACTACTCTGCTAAGTTTGTGAAGACTCTTGAGCGAGTACGTTATGTCCGGATGCTCCAGTTAACAGCAATGCCATTCAATTCTGACATTCTACTATCCAGTATAAAGAAGTTAATCCATCTTCGCTACTTAGAACTGAGGTGTACGTCGGATAAGCCCAAATCTTTGCCTGAGGCTATATGTAAGCTCTACCACCTACAAGTACTAGATGTTCAACATTGGAGTGGTCTAAATGATTTGCCAAAGGATATGAGTAATCTTGTGAACCTACGCCATCTGTTTGTTCCGGGGTCAGGATCATTGCACTCCAAGATATCCAGAGTTGGGGAACTTAAGTTTCTACAAGAACTGAAAGAATTTCAGGTTCAAGAAGCCGATGGCTTTGAGATTTCACAACTCGGGAACATAAATGAAATCAGAGGATCACTTAGTATCCTTGGCCTTGAGACTGTCAAAAAGAAGGGAGATGCAACTCGTGCAAGGCTTAAAGACAAAAAACACCTGAGGACACTTTCACTAACATGGGGGAGTGCAAGCGGAAGTACTACTACCGTCCAGAAAGAAGTGATGGAGGGTCTTAAACCACATGAAAATCTTTCCCATCTTCTTGTCTACAATTATTCTGGTGCTACTCCATCATGGTTATTAGGAGATAGTTTCTCACTTGGCAATTTAGAAAGCCTCCATCTCCAGGATTGTGCAGCAGTGAAGATCCTTCCACCATTTGAGGAGATGCCATTCCTGAAGAAGCTGTCCTTGGTTTGTATGCCCTGTCTGAAAAGTATCAGGATTGACTTCAACTCTGCCGATGAGGAGGATGAACTTGAGTTAAGCGAAATTGAAATATCCAAATGTTTAGCTTTAACATCCATAAGACTACATTCCTGCAAGGCGTTGACTATGTTAAGCATCAATGATTGTGAGGCACTAGGTTCCTTAGAGGGCTTGTCATTTTCTGAAAAACTGAAGCAGTGTGTTGTCCAAGGATGCCCAAAACTTCCGTCAGGTTTCATCGCAAACTGATGATTTGGTGGCAAACTC-TATCAAACTAGCTACCAAAGAAGAGGAGGGAACCGGGATGTGGACGACCTTGTTTCTGCTGAAAAAGGCATGTTTTAACTTCTGTCAGTGGAGGCAGCTTGGACGCTTACTAGTTCGTGCTGTATCGTTGTGGTTTTTGCTGTTGTATTCACTATTATTTTCGTATACTTTATTGTCATTTTATTCACACTACCATATATGGAAATGTTGTGCCTGATGTGTAATATTTCGGTAGGCACACCGGCTAAAACATTAAATGGTCTTAAATACCATGGGAACACATCTGCCCTTCTATGTTACCCAGATAAATACATTGTTATTTTGTGATTATAATTGTAAGGCCGC-AATGAAGATTTGTGCTTAAAAAAAAAAAAA]

[+] EMBL AK066438             [AGCTGTATGAAATAATATACCGAATTTAGGCTGCTTCCTGATTTCACTCTGTATCATCTTGGAATTAAATTTAGGATTTGGTCCTGCCGACAATACCCATAATTAGTCCAACTCCAGCACGCCGGATTGCCGGAAGGTTGGCGACGCGTTATCATTGCCCAGGCCTGCTGCCCCTTCTCCCCTCCTTCTCCTTGGTGAATCGTCGGCGATGGATATCGCTCTTGCTTCTGCGGCGGCGACATGGCTGATCAACAAGCTCCTGGACCGGCTGAGCGACTATGCCATCAAGAAGCTGCTGGGCTCGGAGGGCCTGGACGCGGAGGCCAGCTCCCTCAGGGATGCGCTGCGGCGAGCCACGCTCGTCCTCGGCGCCGTGCCCGCCGGTGCCGCCGCAGGGGTCAGGATTGGGAACGACCAGCTACTTCCGCAGATCGACCTGGTTCAGCGGCTAGCCACCGATTTGGCCAGGCACCTCGACGAGCTCGAGTACTACGACGTCAAGAAAAAGGTAAAGAAGAACCAGAAGAGCAGCAATCCATTATCCAAAATGAATTTACCCCTTACTCAAGCTGGGCAATCAAAGCCGAAGTACAATAGAACAGACATAAAACAGATTAGAGATACTGTGGGATATTTGCATAGCATTTGTGATGATGTTCACAAGGCTCTCTTGCTAGATAAACTTGATGCAATTAAACAAGCTGCTCAAGATGCAAGTACAGACAAACGTGAGACTGTGGATAACTTCACTGAAAATCCTAGAAATAAGGTGTTCCCAAGGGAAGAAATGAAAGATATTATAGAACTAATTAATAGTGCTGCATCGAGTGATCAAGAACTTTTAGTTGTTCCAATAGTTGGTGCTGGTGGTGTTGGGAAGACAACACTTGCTCGATTGGTGTACCATGACCCAGAAGTAAAAGATAAATTTGACATCATGCTCTGGATCTACGTATCTGCTAACTTTGATGAAGTTAAGCTTACACAAGGGATTCTGGAACAAATACCTGAATGTGAGTTCAAAAGCGCCAAGAATCTCACTGTGCTTCAGCGTGGTATCAACAAATATTTGACCAAAAGATTTCTGCTTGTTCTGGATGACATGTGGGAAGAGAGTGAGGGTCGTTGGGACAAGTTATTGGCCCCACTTAGATCCGCACAGGCTAAGGGTAACGTACTCTTGGTAACTACTCGGAAGTTATCGGTGGCTAGGATAACTAGCAACACAGAAGCACACATTGACTTGGATGGTATGAAAAAAGATGACTTCTGGTTATTCTTCAAAAGATGCATATTTGGTGATGAAAACTATCAAGGCCAAAGGAAGCTACAGAATATTGCTAAGAAAATAGCCACCAGACTGAATGGCAATCCATTGGCAGCAAAAAGTGTTGGTACACTTTTGAGAAGAAATATTAATGAGGATTACTGGACAAGAATTCTAGATAGCAATGAATGGAAGTTACAAGAAAGTATTGATGACATTATACCTGCACTAAAGCTCAGTTACAATCAGCTTCCCTATCGTCTTCAGCTACTCTTCAGTTACTGTGCTATGTTTCCAAAGGGTTACAATTTTGACAAAGGACAGTTGATATGTACATGGATTGCTCTGGGATTTGTCATGAATGAGAGAAAGAAATTGGAGGATGAAGGAAGTGACTGTTTTGATGATTTGGTAGACCGAAGCTTTTTCCAGAAATATGGAGTGTCACAGTATTATACTGTGCATGATTTAATGCATGATGTTGCACAAGAAGTCTCCATTAACAAATGCCTTATTATTGATGGGTCAGATCTTCGAACAGTTCCGTCGTCCATTTGTCACCTTAGCATCTGGACTGAGCCGGTGTACAATGAGCAAAGCATAGAACGGAATGATAACTTTGAAGAGAAGTTAGATGCAGTCCAGGATAATGTCTTGGGAAGCTTGGAGTGTTTAATTCTTGCAGGTGTATATGATGAGAACTACTCTGCTAAGTTTGTGAAGACTCTTGAGCGAGTACGTTATGTCCGGATGCTCCAGTTAACAGCAATGCCATTCAATTCTGACATTCTACTATCCAGTATAAAGAAGTTAATCCATCTTCGCTACTTAGAACTGAGGTGTACGTCGGATAAGCCCAAATCTTTGCCTGAGGCTATATGTAAGCTCTACCACCTACAAGTACTAGATGTTCAACATTGGAGTGGTCTAAATGATTTGCCAAAGGATATGAGTAATCTTGTGAACCTACGCCATCTGTTTGTTCCGGGGTCAGGATCATTGCACTCCAAGATATCCAGAGTTGGGGAACTTAAGTTTCTACAAGAACTGAAAGAATTTCAGGTTCAAGAAGCCGATGGCTTTGAGATTTCACAACTCGGGAACATAAATGAAATCAGAGGATCACTTAGTATCCTTGGCCTTGAGACTGTCAAAAAGAAGGGAGATGCAACTCGTGCAAGGCTTAAAGACAAAAAACACCTGAGGACACTTTCACTAACATGGGGGAGTGCAAGCGGAAGTACTACTACCGTCCAGAAAGAAGTGATGGAGGGTCTTAAACCACATGAAAATCTTTCCCATCTTCTTGTCTACAATTATTCTGGTGCTACTCCATCATGGTTATTAGGAGATAGTTTCTCACTTGGCAATTTAGAAAGCCTCCATCTCCAGGATTGTGCAGCAGTGAAGATCCTTCCACCATTTGAGGAGATGCCATTCCTGAAGAAGCTGTCCTTGGTTTGTATGCCCTGTCTGAAAAGTATCAGGATTGACTTCAACTCTGCCGATGAGGAGGATGAACTTGAGTTAAGCGAAATTGAAATATCCAAATGTTTAGCTTTAACATCCATAAGACTACATTCCTGCAAGGCGTTGACTATGTTAAGCATCAATGATTGTGAGGCACTAGGTTCCTTAGAGGGCTTGTCATTTTCTGAAAAACTGAAGCAGTGTGTTGTCCAAGGATGCCCAAAACTTCCGTCAGGTTTCATCGCAAACTGATGATTTGGTGGCAAACTC TATCAAACTAGCTACCAAAGAAGAGGAGGGAACCGGGATGTGGACGACCTTGTTTCTGCTGAAAAAGGCATGTTTTAACTTCTGTCAGTGGAGGCAGCTTGGACGCTTACTAGTTCGTGCTGTATCGTTGTGGTTTTTGCTGTTGTATTCACTATTATTTTCGTATACTTTATTGTCATTTTATTCACACTACCATATATGGAAATGTTGTGCCTGATGTGTAATATTTCGGTAGGCACACCGGCTAAAACATTAAATGGTCTTAAATACCATGGGAACACATCTGCCCTTCTATGTTACCCAGATAAATACATTGTTATTTTGTGATTATAATTGTAAGGCCGC AATGAAGATTTGTG                ]
[+] EMBL AF456246             [                                                                                                                                                   GTTATCATTGCCCAGGCCTGCTGCCCCTTCTCCCCTCCTTCTCCTTGGTGAATCGTCGGCGATGGATATCGCTCTTGCTTCTGCGGCGGCGACATGGCTGATCAACAAGCTCCTGGACCGGCTGAGCGACTATGCCATCAAGAAGCTGCTGGGCTCGGAGGGCCTGGACGCGGAGGCCAGCTCCCTCAGGGATGCGCTGCGGCGAGCCACGCTCGTCCTCGGCGCCGTGCCCGCCGGTGCCGCCGCAGGGGTCAGGATTGGGAACGACCAGCTACTTCCGCAGATCGACCTGGTTCAGCGGCTAGCCACCGATTTGGCCAGGCACCTCGACGAGCTCGAGTACTACGACGTCAAGAAAAAGGTAAAGAAGAACCAGAAGAGCAGCAATCCATTATCCAAAATGAATTTACCCCTTACTCAAGCTGGGCAATCAAAGCCGAAGTACAATAGAACAGACATAAAACAGATTAGAGATACTGTGGGATATTTGCATAGCATTTGTGATGATGTTCACAAGGCTCTCTTGCTAGATAAACTTGATGCAATTAAACAAGCTGCTCAAGATGCAAGTACAGACAAACGTGAGACTGTGGATAACTTCACTGAAAATCCTAGAAATAAGGTGTTCCCAAGGGAAGAAATGAAAGATATTATAGAACTAATTAATAGTGCTGCATCGAGTGATCAAGAACTTTTAGTTGTTCCAATAGTTGGTGCTGGTGGTGTTGGGAAGACAACACTTGCTCGATTGGTGTACCATGACCCAGAAGTAAAAGATAAATTTGACATCATGCTCTGGATCTACGTATCTGCTAACTTTGATGAAGTTAAGCTTACACAAGGGATTCTGGAACAAATACCTGAATGTGAGTTCAAAAGCGCCAAGAATCTCACTGTGCTTCAGCGTGGTATCAACAAATATTTGACCAAAAGATTTCTGCTTGTTCTGGATGACATGTGGGAAGAGAGTGAGGGTCGTTGGGACAAGTTATTGGCCCCACTTAGATCCGCACAGGCTAAGGGTAACGTACTCTTGGTAACTACTCGGAAGTTATCGGTGGCTAGGATAACTAGCAACACAGAAGCACACATTGACTTGGATGGTATGAAAAAAGATGACTTCTGGTTATTCTTCAAAAGATGCATATTTGGTGATGAAAACTATCAAGGCCAAAGGAAGCTACAGAATATTGCTAAGAAAATAGCCACCAGACTGAATGGCAATCCATTGGCAGCAAAAAGTGTTGGTACACTTTTGAGAAGAAATATTAATGAGGATTACTGGACAAGAATTCTAGATAGCAATGAATGGAAGTTACAAGAAAGTATTGATGACATTATACCTGCACTAAAGCTCAGTTACAATCAGCTTCCCTATCGTCTTCAGCTACTCTTCAGTTACTGTGCTATGTTTCCAAAGGGTTACAATTTTGACAAAGGACAGTTGATATGTACATGGATTGCTCTGGGATTTGTCATGAATGAGAGAAAGAAATTGGAGGATGAAGGAAGTGACTGTTTTGATGATTTGGTAGACCGAAGCTTTTTCCAGAAATATGGAGTGTCACAGTATTATACTGTGCATGATTTAATGCATGATGTTGCACAAGAAGTCTCCATTAACAAATGCCTTATTATTGATGGGTCAGATCTTCGAACAGTTCCGTCGTCCATTTGTCACCTTAGCATCTGGACTGAGCCGGTGTACAATGAGCAAAGCATAGAACGGAATGATAACTTTGAAGAGAAGTTAGATGCAGTCCAGGATAATGTCTTGGGAAGCTTGGAGTGTTTAATTCTTGCAGGTGTATATGATGAGAACTACTCTGCTAAGTTTGTGAAGACTCTTGAGCGAGTACGTTATGTCCGGATGCTCCAGTTAACAGCAATGCCATTCAATTCTGACATTCTACTATCCAGTATAAAGAAGTTAATCCATCTTCGCTACTTAGAACTGAGGTGTACGTCGGATAAGCCCAAATCTTTGCCTGAGGCTATATGTAAGCTCTACCACCTACAAGTACTAGATGTTCAACATTGGAGTGGTCTAAATGATTTGCCAAAGGATATGAGTAATCTTGTGAACCTACGCCATCTGTTTGTTCCGGGGTCAGGATCATTGCACTCCAAGATATCCAGAGTTGGGGAACTTAAGTTTCTACAAGAACTGAAAGAATTTCAGGTTCAAGAAGCCGATGGCTTTGAGATTTCACAACTCGGGAACATAAATGAAATCAGAGGATCACTTAGTATCCTTGGCCTTGAGACTGTCAAAAAGAAGGGAGATGCAACTCGTGCAAGGCTTAAAGACAAAAAACACCTGAGGACACTTTCACTAACATGGGGGAGTGCAAGCGGAAGTACTACTACCGTCCAGAAAGAAGTGATGGAGGGTCTTAAACCACATGAAAATCTTTCCCATCTTCTTGTCTACAATTATTCTGGTGCTACTCCATCATGGTTATTAGGAGATAGTTTCTCACTTGGCAATTTAGAAAGCCTCCATCTCCAGGATTGTGCAGCAGTGAAGATCCTTCCACCATTTGAGGAGATGCCATTCCTGAAGAAGCTGTCCTTGGTTTGTATGCCCTGTCTGAAAAGTATCAGGATTGACTTCAACTCTGCCGATGAGGAGGATGAACTTGAGTTAAGCGAAATTGAAATATCCAAATGTTTAGCTTTAACATCCATAAGACTACATTCCTGCAAGGCGTTGACTATGTTAAGCATCAATGATTGTGAGGCACTAGGTTCCTTAGAGGGCTTGTCATTTTCTGAAAAACTGAAGCAGTGTGTTGTCCAAGGATGCCCAAAACTTCCGTCAGGTTTCATCGCAAACTGATGATTTGGTGGCAAACTC TATCAAACTAGCTGCCAAAGAAGAGGAAGTAACCTATATGAGGCCCATCTCGCTTCAGTGGAAAAAGGCTTGATATAGCTTTTGTCAAGGGTGGCTGTTAGGACTCTCACTAGATCGTGCTGTATCGATGTGGTTTTTGCTGTTGTATTCACTATTATTTTCGTATACTTTATTGTCATTTTATTCACACTACCATATATGGAAATGTTGTGCCTGATGTGTAATATTTCGGTAGGCACACCGGCTAAAACATTAAATGGTCTTAAATACCATGGGAACACATCTGCCCTTCTATGTTACCCAGATAAATACATTGTTATTTTGTGATTATAATTGTAAGGCCGCAAATGAAGATTTGTGCTTAAAAAAAAAAAAA]
[+] EMBL BI805558             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTGTTGTCCAAGGATGCCC GAACTTCCGTCAGGTTTCATCGC AACTGATGATTTGGT GC AACTCNTATCAAACTAGCTACC AAGAAGAGGAGGGAACCGGGATGTGGACGACCTTGTTTCTGCTGAAAAAGGCATGTTTTAACTTCTGTCAGTGGAGGCAGCTTGGACGCTTACTAGTTCANGCTGTATCGTTGTGGTTTTT CTGTTGTATTCACTATTATTTTCGTATACTTTA TGTCATTTTATTCACACNACCANATATGGAAATGTTGTGCCTGATGTGTAATATTTCGGTAGGCACACCGTCTAAAAC TTAAATGGTCTTAAATACCATGGG ACACATCTG CCTTCNATG TACCCAGATAA                                                                    ]




>consensus_6970#0
AGCTGTATGAAATAATATACCGAATTTAGGCTGCTTCCTGATTTCACTCTGTATCATCTT
GGAATTAAATTTAGGATTTGGTCCTGCCGACAATACCCATAATTAGTCCAACTCCAGCAC
GCCGGATTGCCGGAAGGTTGGCGACGCGTTATCATTGCCCAGGCCTGCTGCCCCTTCTCC
CCTCCTTCTCCTTGGTGAATCGTCGGCGATGGATATCGCTCTTGCTTCTGCGGCGGCGAC
ATGGCTGATCAACAAGCTCCTGGACCGGCTGAGCGACTATGCCATCAAGAAGCTGCTGGG
CTCGGAGGGCCTGGACGCGGAGGCCAGCTCCCTCAGGGATGCGCTGCGGCGAGCCACGCT
CGTCCTCGGCGCCGTGCCCGCCGGTGCCGCCGCAGGGGTCAGGATTGGGAACGACCAGCT
ACTTCCGCAGATCGACCTGGTTCAGCGGCTAGCCACCGATTTGGCCAGGCACCTCGACGA
GCTCGAGTACTACGACGTCAAGAAAAAGGTAAAGAAGAACCAGAAGAGCAGCAATCCATT
ATCCAAAATGAATTTACCCCTTACTCAAGCTGGGCAATCAAAGCCGAAGTACAATAGAAC
AGACATAAAACAGATTAGAGATACTGTGGGATATTTGCATAGCATTTGTGATGATGTTCA
CAAGGCTCTCTTGCTAGATAAACTTGATGCAATTAAACAAGCTGCTCAAGATGCAAGTAC
AGACAAACGTGAGACTGTGGATAACTTCACTGAAAATCCTAGAAATAAGGTGTTCCCAAG
GGAAGAAATGAAAGATATTATAGAACTAATTAATAGTGCTGCATCGAGTGATCAAGAACT
TTTAGTTGTTCCAATAGTTGGTGCTGGTGGTGTTGGGAAGACAACACTTGCTCGATTGGT
GTACCATGACCCAGAAGTAAAAGATAAATTTGACATCATGCTCTGGATCTACGTATCTGC
TAACTTTGATGAAGTTAAGCTTACACAAGGGATTCTGGAACAAATACCTGAATGTGAGTT
CAAAAGCGCCAAGAATCTCACTGTGCTTCAGCGTGGTATCAACAAATATTTGACCAAAAG
ATTTCTGCTTGTTCTGGATGACATGTGGGAAGAGAGTGAGGGTCGTTGGGACAAGTTATT
GGCCCCACTTAGATCCGCACAGGCTAAGGGTAACGTACTCTTGGTAACTACTCGGAAGTT
ATCGGTGGCTAGGATAACTAGCAACACAGAAGCACACATTGACTTGGATGGTATGAAAAA
AGATGACTTCTGGTTATTCTTCAAAAGATGCATATTTGGTGATGAAAACTATCAAGGCCA
AAGGAAGCTACAGAATATTGCTAAGAAAATAGCCACCAGACTGAATGGCAATCCATTGGC
AGCAAAAAGTGTTGGTACACTTTTGAGAAGAAATATTAATGAGGATTACTGGACAAGAAT
TCTAGATAGCAATGAATGGAAGTTACAAGAAAGTATTGATGACATTATACCTGCACTAAA
GCTCAGTTACAATCAGCTTCCCTATCGTCTTCAGCTACTCTTCAGTTACTGTGCTATGTT
TCCAAAGGGTTACAATTTTGACAAAGGACAGTTGATATGTACATGGATTGCTCTGGGATT
TGTCATGAATGAGAGAAAGAAATTGGAGGATGAAGGAAGTGACTGTTTTGATGATTTGGT
AGACCGAAGCTTTTTCCAGAAATATGGAGTGTCACAGTATTATACTGTGCATGATTTAAT
GCATGATGTTGCACAAGAAGTCTCCATTAACAAATGCCTTATTATTGATGGGTCAGATCT
TCGAACAGTTCCGTCGTCCATTTGTCACCTTAGCATCTGGACTGAGCCGGTGTACAATGA
GCAAAGCATAGAACGGAATGATAACTTTGAAGAGAAGTTAGATGCAGTCCAGGATAATGT
CTTGGGAAGCTTGGAGTGTTTAATTCTTGCAGGTGTATATGATGAGAACTACTCTGCTAA
GTTTGTGAAGACTCTTGAGCGAGTACGTTATGTCCGGATGCTCCAGTTAACAGCAATGCC
ATTCAATTCTGACATTCTACTATCCAGTATAAAGAAGTTAATCCATCTTCGCTACTTAGA
ACTGAGGTGTACGTCGGATAAGCCCAAATCTTTGCCTGAGGCTATATGTAAGCTCTACCA
CCTACAAGTACTAGATGTTCAACATTGGAGTGGTCTAAATGATTTGCCAAAGGATATGAG
TAATCTTGTGAACCTACGCCATCTGTTTGTTCCGGGGTCAGGATCATTGCACTCCAAGAT
ATCCAGAGTTGGGGAACTTAAGTTTCTACAAGAACTGAAAGAATTTCAGGTTCAAGAAGC
CGATGGCTTTGAGATTTCACAACTCGGGAACATAAATGAAATCAGAGGATCACTTAGTAT
CCTTGGCCTTGAGACTGTCAAAAAGAAGGGAGATGCAACTCGTGCAAGGCTTAAAGACAA
AAAACACCTGAGGACACTTTCACTAACATGGGGGAGTGCAAGCGGAAGTACTACTACCGT
CCAGAAAGAAGTGATGGAGGGTCTTAAACCACATGAAAATCTTTCCCATCTTCTTGTCTA
CAATTATTCTGGTGCTACTCCATCATGGTTATTAGGAGATAGTTTCTCACTTGGCAATTT
AGAAAGCCTCCATCTCCAGGATTGTGCAGCAGTGAAGATCCTTCCACCATTTGAGGAGAT
GCCATTCCTGAAGAAGCTGTCCTTGGTTTGTATGCCCTGTCTGAAAAGTATCAGGATTGA
CTTCAACTCTGCCGATGAGGAGGATGAACTTGAGTTAAGCGAAATTGAAATATCCAAATG
TTTAGCTTTAACATCCATAAGACTACATTCCTGCAAGGCGTTGACTATGTTAAGCATCAA
TGATTGTGAGGCACTAGGTTCCTTAGAGGGCTTGTCATTTTCTGAAAAACTGAAGCAGTG
TGTTGTCCAAGGATGCCCAAAACTTCCGTCAGGTTTCATCGCAAACTGATGATTTGGTGG
CAAACTCTATCAAACTAGCTACCAAAGAAGAGGAGGGAACCGGGATGTGGACGACCTTGT
TTCTGCTGAAAAAGGCATGTTTTAACTTCTGTCAGTGGAGGCAGCTTGGACGCTTACTAG
TTCGTGCTGTATCGTTGTGGTTTTTGCTGTTGTATTCACTATTATTTTCGTATACTTTAT
TGTCATTTTATTCACACTACCATATATGGAAATGTTGTGCCTGATGTGTAATATTTCGGT
AGGCACACCGGCTAAAACATTAAATGGTCTTAAATACCATGGGAACACATCTGCCCTTCT
ATGTTACCCAGATAAATACATTGTTATTTTGTGATTATAATTGTAAGGCCGCAATGAAGA
TTTGTGCTTAAAAAAAAAAAAA

consensusID : consensus_6970#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 676
fasta sequence 
                              [GGAGGGAGATGCCATTCCTGAAGAAACTGTCCTTGGTTTGTATGCCCTGTCTGAAAAGTATCAGGATTGACTTCAACTCTGCCGATGAGGAGGATGAACTTGAGTTAAGCAAAATTGAAACATCCAAATGTTTAGCTTTAACATCCATAAGACTACATTCCTGCAAGGCGTTGACTATGTTAAGCATCAATGATTGCGAGGCACTAGGTTCCTTAGAGGGCTTGTCATTTTCTGAAAAGCTGAAGCAGTGTGTTGTCCAAGGATGCCCAAAACTTCCGTCAGGTTTCATCGCAAACTGATGATTTGGTGGCAAACTCTATCAAACTAGCTACCAAAGAAGAGGAGGGAACCGGGATGTGGACGACCTTGTTTCTGCTGAAAAAGGCATGTTTTAACTTCTGCCAGTGGAGGCAGCTTGGACGCTTACTAGTTCATGCTGTATCGTTGTGGTTTTTGCTGTTGTATTCACTATTATTTTCGTATACTTTATTGTCATTTTATTCACACTACCATATATGGAAATGTTATGCTTGATGTGTAATATTTCGGTAGGCACACCGGCTAAAACATTAAATGGTCTTAAATACCATGGGAACACATCTGCCCTTCTATGTTACCCAGATAAATACATTGTTATTTTGTGATTATAATTGTAAGGCCGCAAAAAAAAAAAAAA]

[-] EMBL CA759677             [GGAGGGAGATGCCATTCCTGAAGAAACTGTCCTTGGTTTGTATGCCCTGTCTGAAAAGTATCAGGATTGACTTCAACTCTGCCGATGAGGAGGATGAACTTGAGTTAAGCAAAATTGAAACATCCAAATGTTTAGCTTTAACATCCATAAGACTACATTCCTGCAAGGCGTTGACTATGTTAAGCATCAATGATTGCGAGGCACTAGGTTCCTTAGAGGGCTTGTCATTTTCTGAAAAGCTGAAGCAGTGTGTTGTCCAAGGATGCCCAAAACTTCCGTCAGGTTTCATCGCAAACTGATGATTTGGTGGCAAACTCTATCAAACTAGCTACCAAAGAAGAGGAGGGAACCGGGATGTGGACGACCTTGTTTCTGCTGAAAAAGGCATGTTTTAACTTCTGCCAGTGGAGGCAGCTTGGACGCTTACTAGTTCATGCTGTATCGTTGTGGTTTTTGCTGTTGTATTCACTATTATTTTCGTATACTTTATTGTCATTTTATTCACACTACCATATATGGAAATGTTATGCTTGATGTGTAATATTTCGGTAGGCACACCGGCTAAAACATTAAATGGTCTTAAATACCATGGGAACACATCTGCCCTTCTATGTTACCCAGATAAATACATTGTTATTTTGTGATTATAATTGTAAGGCCGCAAAAAAAAAAAAAA]




>consensus_6970#1
GGAGGGAGATGCCATTCCTGAAGAAACTGTCCTTGGTTTGTATGCCCTGTCTGAAAAGTA
TCAGGATTGACTTCAACTCTGCCGATGAGGAGGATGAACTTGAGTTAAGCAAAATTGAAA
CATCCAAATGTTTAGCTTTAACATCCATAAGACTACATTCCTGCAAGGCGTTGACTATGT
TAAGCATCAATGATTGCGAGGCACTAGGTTCCTTAGAGGGCTTGTCATTTTCTGAAAAGC
TGAAGCAGTGTGTTGTCCAAGGATGCCCAAAACTTCCGTCAGGTTTCATCGCAAACTGAT
GATTTGGTGGCAAACTCTATCAAACTAGCTACCAAAGAAGAGGAGGGAACCGGGATGTGG
ACGACCTTGTTTCTGCTGAAAAAGGCATGTTTTAACTTCTGCCAGTGGAGGCAGCTTGGA
CGCTTACTAGTTCATGCTGTATCGTTGTGGTTTTTGCTGTTGTATTCACTATTATTTTCG
TATACTTTATTGTCATTTTATTCACACTACCATATATGGAAATGTTATGCTTGATGTGTA
ATATTTCGGTAGGCACACCGGCTAAAACATTAAATGGTCTTAAATACCATGGGAACACAT
CTGCCCTTCTATGTTACCCAGATAAATACATTGTTATTTTGTGATTATAATTGTAAGGCC
GCAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6970#0      AGCTGTATGAAATAATATACCGAATTTAGGCTGCTTCCTGATTTCACTCTGTATCATCTT 60
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      GGAATTAAATTTAGGATTTGGTCCTGCCGACAATACCCATAATTAGTCCAACTCCAGCAC 120
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      GCCGGATTGCCGGAAGGTTGGCGACGCGTTATCATTGCCCAGGCCTGCTGCCCCTTCTCC 180
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CCTCCTTCTCCTTGGTGAATCGTCGGCGATGGATATCGCTCTTGCTTCTGCGGCGGCGAC 240
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      ATGGCTGATCAACAAGCTCCTGGACCGGCTGAGCGACTATGCCATCAAGAAGCTGCTGGG 300
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CTCGGAGGGCCTGGACGCGGAGGCCAGCTCCCTCAGGGATGCGCTGCGGCGAGCCACGCT 360
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CGTCCTCGGCGCCGTGCCCGCCGGTGCCGCCGCAGGGGTCAGGATTGGGAACGACCAGCT 420
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      ACTTCCGCAGATCGACCTGGTTCAGCGGCTAGCCACCGATTTGGCCAGGCACCTCGACGA 480
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      GCTCGAGTACTACGACGTCAAGAAAAAGGTAAAGAAGAACCAGAAGAGCAGCAATCCATT 540
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      ATCCAAAATGAATTTACCCCTTACTCAAGCTGGGCAATCAAAGCCGAAGTACAATAGAAC 600
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      AGACATAAAACAGATTAGAGATACTGTGGGATATTTGCATAGCATTTGTGATGATGTTCA 660
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CAAGGCTCTCTTGCTAGATAAACTTGATGCAATTAAACAAGCTGCTCAAGATGCAAGTAC 720
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      AGACAAACGTGAGACTGTGGATAACTTCACTGAAAATCCTAGAAATAAGGTGTTCCCAAG 780
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      GGAAGAAATGAAAGATATTATAGAACTAATTAATAGTGCTGCATCGAGTGATCAAGAACT 840
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      TTTAGTTGTTCCAATAGTTGGTGCTGGTGGTGTTGGGAAGACAACACTTGCTCGATTGGT 900
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      GTACCATGACCCAGAAGTAAAAGATAAATTTGACATCATGCTCTGGATCTACGTATCTGC 960
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      TAACTTTGATGAAGTTAAGCTTACACAAGGGATTCTGGAACAAATACCTGAATGTGAGTT 1020
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CAAAAGCGCCAAGAATCTCACTGTGCTTCAGCGTGGTATCAACAAATATTTGACCAAAAG 1080
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      ATTTCTGCTTGTTCTGGATGACATGTGGGAAGAGAGTGAGGGTCGTTGGGACAAGTTATT 1140
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      GGCCCCACTTAGATCCGCACAGGCTAAGGGTAACGTACTCTTGGTAACTACTCGGAAGTT 1200
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      ATCGGTGGCTAGGATAACTAGCAACACAGAAGCACACATTGACTTGGATGGTATGAAAAA 1260
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      AGATGACTTCTGGTTATTCTTCAAAAGATGCATATTTGGTGATGAAAACTATCAAGGCCA 1320
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      AAGGAAGCTACAGAATATTGCTAAGAAAATAGCCACCAGACTGAATGGCAATCCATTGGC 1380
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      AGCAAAAAGTGTTGGTACACTTTTGAGAAGAAATATTAATGAGGATTACTGGACAAGAAT 1440
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      TCTAGATAGCAATGAATGGAAGTTACAAGAAAGTATTGATGACATTATACCTGCACTAAA 1500
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      GCTCAGTTACAATCAGCTTCCCTATCGTCTTCAGCTACTCTTCAGTTACTGTGCTATGTT 1560
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      TCCAAAGGGTTACAATTTTGACAAAGGACAGTTGATATGTACATGGATTGCTCTGGGATT 1620
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      TGTCATGAATGAGAGAAAGAAATTGGAGGATGAAGGAAGTGACTGTTTTGATGATTTGGT 1680
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      AGACCGAAGCTTTTTCCAGAAATATGGAGTGTCACAGTATTATACTGTGCATGATTTAAT 1740
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      GCATGATGTTGCACAAGAAGTCTCCATTAACAAATGCCTTATTATTGATGGGTCAGATCT 1800
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      TCGAACAGTTCCGTCGTCCATTTGTCACCTTAGCATCTGGACTGAGCCGGTGTACAATGA 1860
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      GCAAAGCATAGAACGGAATGATAACTTTGAAGAGAAGTTAGATGCAGTCCAGGATAATGT 1920
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CTTGGGAAGCTTGGAGTGTTTAATTCTTGCAGGTGTATATGATGAGAACTACTCTGCTAA 1980
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      GTTTGTGAAGACTCTTGAGCGAGTACGTTATGTCCGGATGCTCCAGTTAACAGCAATGCC 2040
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      ATTCAATTCTGACATTCTACTATCCAGTATAAAGAAGTTAATCCATCTTCGCTACTTAGA 2100
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      ACTGAGGTGTACGTCGGATAAGCCCAAATCTTTGCCTGAGGCTATATGTAAGCTCTACCA 2160
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CCTACAAGTACTAGATGTTCAACATTGGAGTGGTCTAAATGATTTGCCAAAGGATATGAG 2220
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      TAATCTTGTGAACCTACGCCATCTGTTTGTTCCGGGGTCAGGATCATTGCACTCCAAGAT 2280
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      ATCCAGAGTTGGGGAACTTAAGTTTCTACAAGAACTGAAAGAATTTCAGGTTCAAGAAGC 2340
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CGATGGCTTTGAGATTTCACAACTCGGGAACATAAATGAAATCAGAGGATCACTTAGTAT 2400
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CCTTGGCCTTGAGACTGTCAAAAAGAAGGGAGATGCAACTCGTGCAAGGCTTAAAGACAA 2460
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      AAAACACCTGAGGACACTTTCACTAACATGGGGGAGTGCAAGCGGAAGTACTACTACCGT 2520
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CCAGAAAGAAGTGATGGAGGGTCTTAAACCACATGAAAATCTTTCCCATCTTCTTGTCTA 2580
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      CAATTATTCTGGTGCTACTCCATCATGGTTATTAGGAGATAGTTTCTCACTTGGCAATTT 2640
consensus_6970#1      ------------------------------------------------------------
                                                                                  

consensus_6970#0      AGAAAGCCTCCATCTCCAGGATTGTGCAGCAGTGAAGATCCTTCCACCATTTGAGGAGAT 2700
consensus_6970#1      --------------------------------------------------GGAGGGAGAT 10
                                                                            ******

consensus_6970#0      GCCATTCCTGAAGAAGCTGTCCTTGGTTTGTATGCCCTGTCTGAAAAGTATCAGGATTGA 2760
consensus_6970#1      GCCATTCCTGAAGAAACTGTCCTTGGTTTGTATGCCCTGTCTGAAAAGTATCAGGATTGA 70
                      *************** ********************************************

consensus_6970#0      CTTCAACTCTGCCGATGAGGAGGATGAACTTGAGTTAAGCGAAATTGAAATATCCAAATG 2820
consensus_6970#1      CTTCAACTCTGCCGATGAGGAGGATGAACTTGAGTTAAGCAAAATTGAAACATCCAAATG 130
                      **************************************** ********* *********

consensus_6970#0      TTTAGCTTTAACATCCATAAGACTACATTCCTGCAAGGCGTTGACTATGTTAAGCATCAA 2880
consensus_6970#1      TTTAGCTTTAACATCCATAAGACTACATTCCTGCAAGGCGTTGACTATGTTAAGCATCAA 190
                      ************************************************************

consensus_6970#0      TGATTGTGAGGCACTAGGTTCCTTAGAGGGCTTGTCATTTTCTGAAAAACTGAAGCAGTG 2940
consensus_6970#1      TGATTGCGAGGCACTAGGTTCCTTAGAGGGCTTGTCATTTTCTGAAAAGCTGAAGCAGTG 250
                      ****** ***************************************** ***********

consensus_6970#0      TGTTGTCCAAGGATGCCCAAAACTTCCGTCAGGTTTCATCGCAAACTGATGATTTGGTGG 3000
consensus_6970#1      TGTTGTCCAAGGATGCCCAAAACTTCCGTCAGGTTTCATCGCAAACTGATGATTTGGTGG 310
                      ************************************************************

consensus_6970#0      CAAACTCTATCAAACTAGCTACCAAAGAAGAGGAGGGAACCGGGATGTGGACGACCTTGT 3060
consensus_6970#1      CAAACTCTATCAAACTAGCTACCAAAGAAGAGGAGGGAACCGGGATGTGGACGACCTTGT 370
                      ************************************************************

consensus_6970#0      TTCTGCTGAAAAAGGCATGTTTTAACTTCTGTCAGTGGAGGCAGCTTGGACGCTTACTAG 3120
consensus_6970#1      TTCTGCTGAAAAAGGCATGTTTTAACTTCTGCCAGTGGAGGCAGCTTGGACGCTTACTAG 430
                      ******************************* ****************************

consensus_6970#0      TTCGTGCTGTATCGTTGTGGTTTTTGCTGTTGTATTCACTATTATTTTCGTATACTTTAT 3180
consensus_6970#1      TTCATGCTGTATCGTTGTGGTTTTTGCTGTTGTATTCACTATTATTTTCGTATACTTTAT 490
                      *** ********************************************************

consensus_6970#0      TGTCATTTTATTCACACTACCATATATGGAAATGTTGTGCCTGATGTGTAATATTTCGGT 3240
consensus_6970#1      TGTCATTTTATTCACACTACCATATATGGAAATGTTATGCTTGATGTGTAATATTTCGGT 550
                      ************************************ *** *******************

consensus_6970#0      AGGCACACCGGCTAAAACATTAAATGGTCTTAAATACCATGGGAACACATCTGCCCTTCT 3300
consensus_6970#1      AGGCACACCGGCTAAAACATTAAATGGTCTTAAATACCATGGGAACACATCTGCCCTTCT 610
                      ************************************************************

consensus_6970#0      ATGTTACCCAGATAAATACATTGTTATTTTGTGATTATAATTGTAAGGCCGCAATGAAGA 3360
consensus_6970#1      ATGTTACCCAGATAAATACATTGTTATTTTGTGATTATAATTGTAAGGCCGCAAAAAAAA 670
                      ******************************************************  ** *

consensus_6970#0      TTTGTGCTTAAAAAAAAAAAAA 3382
consensus_6970#1      ---------AAAAAA------- 676
                               ******


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)