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Oryza sativa
cluster # 6989 cluster # 6989       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6989#0 length = 1131 sequences # 4  
consensusID : consensus_6989#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1131
fasta sequence 
                              [CGCGCGCCTCCGCTCCATTCCTGATTCCTCCTCCCAACTCTTGCTTCCGTTTTCCGTGCCCCTCCTGCCGACAAACCCACACCTGAATAGCTCATCCTCACCTGATCAGCTGAACCTGTTTGAGAGAAAGAAGTTAGTTGGCCATCTCGCCCTCGCTAGAAAAAGGAAAAAAAAGAAGGAAAGGAGAAGGAGGAGAGAGCTTGCTTTGCTGCTGGGTTGTTGCTAATGGTGTTCTACTACAAGGCGAGGCCGGACGCCGGCGACTACACCATCTACATGGGCGCCGACAAGAACGAGAACGAGGAGCTCATCAAGTACGGCCTCCCCGAGGACGTCTGGTTCCACGTGGACAAGGTATCCTCGGCGCACGTCTATTTGAGGCTCAAGAAAGGCGAGTCGATAGATAGCATCTGCGACGGTCTGCTGGAGGACTGTGCACAGCTTGTAAAGGCTCATTCCATTCAAGGAAACAAGATGAACAATGTTGAGGTGGTCTACACGCCCTGGTCCAATCTCAAGAAGTCCCCATCCATGGATGTCGGTCA--A-GTTGGCT--TCCATAATACCAGGATGGTTCGCGTGGTGATCGTCGAGAAGCGCGTCAATGAGATCATCAACAGGTTGAACAAGACCAGGGTAGAGCGCCGGCCTGATCTGAAAGCCGAGAAGGACGCGTCGAACGCGGCGGAGAAGGCGGAGAGGAAGATGCAGCTGAAGGAGAAGAGGCGGCGGGAGGAGATGGAGAGGCTGGAGAAGGAGAGGCGGGCGGAGATACGGAGCTACAAGGGCCTCATGGTCGCCGAGAAGATGACCTCCAACCGCCAGATCGCCTCCGCCGGCAACTCCATGCAGGAGATGGAGGACGACTTCGTCTGATCCATCCATCCATCCGTCCGAAGCCAGCAACCGCTCCCGGGCATGCGTGCGTGCGTGCGTGCGTGCGTAACGTACGTGTGCGGCCACGTGTTTCTCTGTACATCATCCATCCATATAAGCGTGCGTGATCGTCTCACCGGTCAGTCTCCCTGGAACGGTTTCTGCAGTTCTGCTATAGTAGTGGTAGTAGCACATCTCTGTACATACACATGGTCCCTAGCAATGGGCACAGATGAGAAAGAAGGCAACGCGATTTTG]

[+] EMBL AK067516             [CGCGCGCCTCCGCTCCATTCCTGATTCCTCCTCCCAACTCTTGCTTCCGTTTTCCGTGCCCCTCCTGCCGACAAACCCACACCTGAATAGCTCATCCTCACCTGATCAGCTGAACCTGTTTGAGAGAAAGAAGTTAGTTGGCCATCTCGCCCTCGCTAGAAAAAGGAAAAAAAAGAAGGAAAGGAGAAGGAGGAGAGAGCTTGCTTTGCTGCTGGGTTGTTGCTAATGGTGTTCTACTACAAGGCGAGGCCGGACGCCGGCGACTACACCATCTACATGGGCGCCGACAAGAACGAGAACGAGGAGCTCATCAAGTACGGCCTCCCCGAGGACGTCTGGTTCCACGTGGACAAGGTATCCTCGGCGCACGTCTATTTGAGGCTCAAGAAAGGCGAGTCGATAGATAGCATCTGCGACGGTCTGCTGGAGGACTGTGCACAGCTTGTAAAGGCTCATTCCATTCAAGGAAACAAGATGAACAATGTTGAGGTGGTCTACACGCCCTGGTCCAATCTCAAGAAGTCCCCATCCATGGATGTCGGTCA  A GTTGGCT  TCCATAATACCAGGATGGTTCGCGTGGTGATCGTCGAGAAGCGCGTCAATGAGATCATCAACAGGTTGAACAAGACCAGGGTAGAGCGCCGGCCTGATCTGAAAGCCGAGAAGGACGCGTCGAACGCGGCGGAGAAGGCGGAGAGGAAGATGCAGCTGAAGGAGAAGAGGCGGCGGGAGGAGATGGAGAGGCTGGAGAAGGAGAGGCGGGCGGAGATACGGAGCTACAAGGGCCTCATGGTCGCCGAGAAGATGACCTCCAACCGCCAGATCGCCTCCGCCGGCAACTCCATGCAGGAGATGGAGGACGACTTCGTCTGATCCATCCATCCATCCGTCCGAAGCCAGCAACCGCTCCCGGGCATGCGTGCGTGCGTGCGTGCGTGCGTAACGTACGTGTGCGGCCACGTGTTTCTCTGTACATCATCCATCCATATAAGCGTGCGTGATCGTCTCACCGGTCAGTCTCCCTGGAACGGTTTCTGCAGTTCTGCTATAGTAGTGGTAGTAGCACATCTCTGTACATACACATGGTCCCTAGCAATGGGCACAGATGAGAAAGAAGGCAACGCGATTTT ]
[+] EMBL AK104228             [ GCGCGCCTCCGCTCCATTCCTGATTCCTCCTCCCAACTCTTGCTTCCGTTTTCCGTGCCCCTCCTGCCGACAAACCCACACCTGAATAGCTCATCCTCACCTGATCAGCTGAACCTGTTTGAGAGAAAGAAGTTAGTTGGCCATCTCGCCCTCGCTAGAAAAAGGAAAAAAAAGAAGGAAAGGAGAAGGAGGAGAGAGCTTGCTTTGCTGCTGGGTTGTTGCTAATGGTGTTCTACTACAAGGCGAGGCCGGACGCCGGCGACTACACCATCTACATGGGCGCCGACAAGAACGAGAACGAGGAGCTCATCAAGTACGGCCTCCCCGAGGACGTCTGGTTCCACGTGGACAAGGTATCCTCGGCGCACGTCTATTTGAGGCTCAAGAAAGGCGAGTCGATAGATAGCATCTGCGACGGTCTGCTGGAGGACTGTGCACAGCTTGTAAAGGCTCATTCCATTCAAGGAAACAAGATGAACAATGTTGAGGTGGTCTACACGCCCTGGTCCAATCTCAAGAAGTCCCCATCCATGGATGTCGGTCA  A GTTGGCT  TCCATAATACCAGGATGGTTCGCGTGGTGATCGTCGAGAAGCGCGTCAATGAGATCATCAACAGGTTGAACAAGACCAGGGTAGAGCGCCGGCCTGATCTGAAAGCCGAGAAGGACGCGTCGAACGCGGCGGAGAAGGCGGAGAGGAAGATGCAGCTGAAGGAGAAGAGGCGGCGGGAGGAGATGGAGAGGCTGGAGAAGGAGAGGCGGGCGGAGATACGGAGCTACAAGGGCCTCATGGTCGCCGAGAAGATGACCTCCAACCGCCAGATCGCCTCCGCCGGCAACTCCATGCAGGAGATGGAGGACGACTTCGTCTGATCCATCCATCCATCCGTCCGAAGCCAGCAACCGCTCCCGGGCATGCGTGCGTGCGTGCGTGCGTGCGTAACGTACGTGTGCGGCCACGTGTTTCTCTGTACATCATCCATCCATATAAGCGTGCGTGATCGTCTCACCGGTCAGTCTCCCTGGAACGGTTTCTGCAGTTCTGCTATAGTAGTGGTAGTAGCACATCTCTGTACATACACATGGTCCCTAGCAATGGGCACAGATGAGAAAGAAGGCAACGC       ]
[+] EMBL AK104728             [ GCGCGCCTCCGCTCCATTCCTGATTCCTCCTCCCAACTCTTGCTTCCGTTTTCCGTGCCCCTCCTGCCGACAAACCCACACCTGAATAGCTCATCCTCACCTGATCAGCTGAACCTGTTTGAGAGAAAGAAGTTAGTTGGCCATCTCGCCCTCGCTAGAAAAAGGAAAAAAAAGAAGGAAAGGAGAAGGAGGAGAGAGCTTGCTTTGCTGCTGGGTTGTTGCTAATGGTGTTCTACTACAAGGCGAGGCCGGACGCCGGCGACTACACCATCTACATGGGCGCCGACAAGAACGAGAACGAGGAGCTCATCAAGTACGGCCTCCCCGAGGACGTCTGGTTCCACGTGGACAAGGTATCCTCGGCGCACGTCTATTTGAGGCTCAAGAAAGGCGAGTCGATAGATAGCATCTGCGACGGTCTGCTGGAGGACTGTGCACAGCTTGTAAAGGCTCATTCCATTCAAGGAAACAAGATGAACAATGTTGAGGTGGTCTACACGCCCTGGTCCAATCTCAAGAAGTCCCCATCCATGGATGTCGGTCA  A GTTGGCT  TCCATAATACCAGGATGGTTCGCGTGGTGATCGTCGAGAAGCGCGTCAATGAGATCATCAACAGGTTGAACAAGACCAGGGTAGAGCGCCGGCCTGATCTGAAAGCCGAGAAGGACGCGTCGAACGCGGCGGAGAAGGCGGAGAGGAAGATGCAGCTGAAGGAGAAGAGGCGGCGGGAGGAGATGGAGAGGCTGGAGAAGGAGAGGCGGGCGGAGATACGGAGCTACAAGGGCCTCATGGTCGCCGAGAAGATGACCTCCAACCGCCAGATCGCCTCCGCCGGCAACTCCATGCAGGAGATGGAGGACGACTTCGTCTGATCCATCCATCCATCCGTCCGAAGCCAGCAACCGCTCCCGGGCATGCGTGCGTGCGTGCGTGCGTGCGTAACGTACGTGTGCGGCCACGTGTTTCTCTGTACATCATCCATCCATATAAGCGTGCGTGATCGTCTCACCGGTCAGTCTCCCTGGAACGGTTTCTGCAGTTCTGCTATAGTAGTGGTAGTAGCACATCTCTGTACATACACATGGTCCCTAGCAATGGGCACAGATGAGAAAGAAGGCAACGC       ]
[-] EMBL CB637009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   taGGATGT  GTCACGACGCTGGCTGATCACTGATGCATGGCAGGTTCGCGTGGTGATCGTCGAGAAGCGCGTCAATGAGATCATCAACAGGTTGAACAAGACCAGGGTAGAGCGCCGGCCTGATCTGAAAGCCGAGAAGGACGCGTCGAACGCGGCGGAGAAGGCGGAGAGGAAGATGCAGCTGAAGGAGAAGAGGCGGCGGGAGGAGATGGAGAGGCTGGAGAAGGAGAGGCGGGCGGAGATACGGAGCTACAAGGGCCTCATGGTCGCCGAGAAGATGACCTCCAACCGCCAGATCGCCTCCGCCGGCAACTCCATGCAGGAGATGGAGGACGACTTCGTTTGATCCATCCATCCATCCGTCCGAAGCCAGCAACCGCTCCCGGGCATGCGTGCGTGCGTGCGTGCGTGCGTAACGTACGTGTGCGGCCACGTGTTTCTCTGTACATCATCCATCCATATAAGCGTGCGTGATCGTCTCACCGGTCAGTCTCCCTGGAACGGTTTCTGCAGTTCTGCTATAGTAGTGGTAGTAGCACATCTCTGTACATACACATGGTCCCTAGCAATGGGCACAGATGAGAAAGAAGGCAACGCGATTTcg]




>consensus_6989#0
CGCGCGCCTCCGCTCCATTCCTGATTCCTCCTCCCAACTCTTGCTTCCGTTTTCCGTGCC
CCTCCTGCCGACAAACCCACACCTGAATAGCTCATCCTCACCTGATCAGCTGAACCTGTT
TGAGAGAAAGAAGTTAGTTGGCCATCTCGCCCTCGCTAGAAAAAGGAAAAAAAAGAAGGA
AAGGAGAAGGAGGAGAGAGCTTGCTTTGCTGCTGGGTTGTTGCTAATGGTGTTCTACTAC
AAGGCGAGGCCGGACGCCGGCGACTACACCATCTACATGGGCGCCGACAAGAACGAGAAC
GAGGAGCTCATCAAGTACGGCCTCCCCGAGGACGTCTGGTTCCACGTGGACAAGGTATCC
TCGGCGCACGTCTATTTGAGGCTCAAGAAAGGCGAGTCGATAGATAGCATCTGCGACGGT
CTGCTGGAGGACTGTGCACAGCTTGTAAAGGCTCATTCCATTCAAGGAAACAAGATGAAC
AATGTTGAGGTGGTCTACACGCCCTGGTCCAATCTCAAGAAGTCCCCATCCATGGATGTC
GGTCAAGTTGGCTTCCATAATACCAGGATGGTTCGCGTGGTGATCGTCGAGAAGCGCGTC
AATGAGATCATCAACAGGTTGAACAAGACCAGGGTAGAGCGCCGGCCTGATCTGAAAGCC
GAGAAGGACGCGTCGAACGCGGCGGAGAAGGCGGAGAGGAAGATGCAGCTGAAGGAGAAG
AGGCGGCGGGAGGAGATGGAGAGGCTGGAGAAGGAGAGGCGGGCGGAGATACGGAGCTAC
AAGGGCCTCATGGTCGCCGAGAAGATGACCTCCAACCGCCAGATCGCCTCCGCCGGCAAC
TCCATGCAGGAGATGGAGGACGACTTCGTCTGATCCATCCATCCATCCGTCCGAAGCCAG
CAACCGCTCCCGGGCATGCGTGCGTGCGTGCGTGCGTGCGTAACGTACGTGTGCGGCCAC
GTGTTTCTCTGTACATCATCCATCCATATAAGCGTGCGTGATCGTCTCACCGGTCAGTCT
CCCTGGAACGGTTTCTGCAGTTCTGCTATAGTAGTGGTAGTAGCACATCTCTGTACATAC
ACATGGTCCCTAGCAATGGGCACAGATGAGAAAGAAGGCAACGCGATTTTG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)