cluster # 6992

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Oryza sativa
cluster # 6992 cluster # 6992 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6992#0 length = 454 sequences # 4

consensusID : consensus_6992#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 454
fasta sequence

                              [ATGCACAAATTAGCTGATGATCTCTATCGTTGTAGGTGCTAGCTACAAGAGCTCATAATCGGTACGTACAAAGCGCATCGCAGCTAGGCAGGCATCAAATTAATCGATCTGAATCCATGGCGCGGTGGTGCATGAGCATGATGCACATCGTTCTTCTTC-TACTTGTAGTGGTGCTCATGCTACTTAATGTATCATGTGAGGCCGCTAGAGGCATGCCCGCGCCGCAGGNGCNAC-AACCATGGCGAAGGCCATGNA-GGCCGGCGGCGGCGGGGGTCTCAATGACCACAAGACCTTTC-TGCCGCCAGTGCCCAGGCATGGGCGGCGGCGGTGTTTGAGGCTTCGCTGGTATGGGAGGTCCTCTCGGCGGGGTCATCGGAGGGCATCGGTGGTGTTCTTCGGAGGGAAGCCCTTCTGGGTCTTGGGAGGAGGCCTCGGCGGTGGATCCTCCGGTGGC]

[+] EMBL AU066270             [ATGCACAAATNAGCTGATGATCTCTATCGTTGTAGGTGCTAGCTACAAGAGCTCATAATCGGTACGTACAAAGCGCATCGCAGCTAGGCAGGCATCAAATTAATCGATCTGAATCCATGGCGCGGTGGTGCATGAGCATGATGCACATCGTTCTTCTTC TACTTGTAGTGGTGCTCATGCTACTTAATGTATCATGTGAGGCCGCTAGAGGCATGCCCGCGCCGCAGGNGCNAC AACCATGGCGAAGGCCATGNA GGCCGGCGGCGGCGGGGGTCTCAATGACCACAAGACCTTTC TGCCGCCAGTGCCCAGGCATGGGCGGCGGCGGTGTTTGAGGCTTCGCTGGTATGGGAGGTCCTCTCGGCGGGGTCATCGGAGGGCATCGGTGGTGTTCTTCGGAGGGAAGCCCTTCTGGGTCTTGGGAGGAGGCCTCGGCGGTGGATCCTCCGGTGGC]
[+] EMBL AU066179             [ATGCACAAATTAGCTGATGATCTCTATCGTTGTAGGTGCTAGCTACAAGAGCTCATAATCGGTACGTACAAAGCGCATCGCAGCTAGGCAGGCATCAAATTAATCGATCTGAATCCATGGCGCGGTGGTGCATGAGCATGATGCACATCGTTCTTCTTC TACTTGTAGTGGTGCTCATGCTACTTAATGTATCATGTGAGGCCGCTAGAGGCATGCCCGCGCCGCAGGGGCCACAAACCATGGCGAGGGCCATGGAGGGCCGNCGGCGGCGGGGGTCTCAATGACCACAAGACCTTTCTTGCCG CANTG CAAGGCATGGGCGCCGCCGGTGTTgg                                                                                                                        ]
[+] EMBL OSS0768A             [ TGCACAAATTAGCTGATGATCTCTATCGTTGTAGGTGNTAGCTACAAGAGCTCATAATCGGTACGTACAAAGCGCATCGCAGCTAGGCAGGCATCAAATTAATCGATCTGAATCCATGGCGCGGTGGTGCATGAGCATGATGCACATCGTTCTTCTTC TACTTGTAGTGGTGCTCATGCTACTTAATGTATCATGTGAGGCCGCTAGAGGCATGCCCGCG                                                                                                                                                                                                                                            ]
[+] EMBL OSS1016A             [ TGCACAAATTAGCTGATGACCTCTATCGTNGTAGGNGCTAGCTACAAGAGCTCATAATCGGTACGTACAAAGNGCATCNCAGNTAGGCAGGCATCAAATTAATCGATCTGAATCCATGGCGCGGTGGTGCATGAGCATTATGCACATCGTTCTTCTTCTTACTTGTAGTGGTGCTCATGCTACTTAATGTATCATGTGAGGCCGTTAGAG                                                                                                                                                                                                                                                       ]




>consensus_6992#0
ATGCACAAATTAGCTGATGATCTCTATCGTTGTAGGTGCTAGCTACAAGAGCTCATAATC
GGTACGTACAAAGCGCATCGCAGCTAGGCAGGCATCAAATTAATCGATCTGAATCCATGG
CGCGGTGGTGCATGAGCATGATGCACATCGTTCTTCTTCTACTTGTAGTGGTGCTCATGC
TACTTAATGTATCATGTGAGGCCGCTAGAGGCATGCCCGCGCCGCAGGNGCNACAACCAT
GGCGAAGGCCATGNAGGCCGGCGGCGGCGGGGGTCTCAATGACCACAAGACCTTTCTGCC
GCCAGTGCCCAGGCATGGGCGGCGGCGGTGTTTGAGGCTTCGCTGGTATGGGAGGTCCTC
TCGGCGGGGTCATCGGAGGGCATCGGTGGTGTTCTTCGGAGGGAAGCCCTTCTGGGTCTT
GGGAGGAGGCCTCGGCGGTGGATCCTCCGGTGGC

clustalw multiple alignements is not computed in this case