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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6998 cluster # 6998       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6998#0 length = 437 sequences # 4  

consensusID : consensus_6998#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 437
fasta sequence
                              [GGCCCCGGCGGCGGGTCCCACNAGGTCGGCCACGACTGGGTGCCCCGGCC-GGGCCCCGGCC-CCCCCCGGCT-GGANAAGCTCATGGACAGGANCGTCAGGTCGGAGGCCCTCCGTCAACAGCCAGTGCAAGTAGCTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAATCTTAATCTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTTACCCTACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAAACTTAAAAGCATATATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAATTAACTGTAATCCATTTTCATTATCCCATCTCGAAAGGACAAGGTGTTTTCTGTGGTTAAAAAAAAAAAAAAAAAAA]

[+] EMBL C98975               [GGCCCCGGCGGCGGGTCCCACNAGGTCGGCCACGACTGGGTGCCCCGGCC GGGCCCCGGCC CCCCCCGGCT GGANAAGCTCATGGACAGGANCGTCAGGTCGGAGGCCCTCCGTCAACAGCCAGTGCAAGTAGCTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAATCTTAATCTGCATCGTGTAANTCGCTTCTTTTTTCTTCTTTTTTTTTACCCTACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAAACTTNAAAGCATATATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAATTAACTGTAATCCATTTTCATTATCCCATCTCGAAAGGACAAGGTGTTTTCTGTGGTTAAAAAAAAAAAAAAAAA  ]
[+] EMBL C99471               [                               ACGACTGGGTGCTCCGGCCGGGGCCCCGGCCGCCGCGCGGCTGGGACAAGCNCATGGACAGGATCGTCAGGTCGGAGGCCNTCCGTCAACAGCCAGTGCAAGTAGCTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAANCTTAATCTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTTACCCTACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAAACTTAAAAGCATATATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAATTAACTGTAATCCATTTTCATTATCCCATCTCGAAAGGACAAGGTGTTTTCTGTAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU094649             [                                                                                                     GTCGGAGG CCTTCGTCAACAGCCAGTGCAAGTAGCTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAATCTTAATCTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTTACCCTACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAAACTTAAAAGCATATATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAATTAACTGTAATCCATTTTCATTATCCCATCTCGAAAG                                        ]
[-] EMBL CB663972             [                                                                                                      TCGGAGG CCTTCGTCATCACCCAGTGCAAGTAGTTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAATCTTAATCTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTTCCCATACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAACCTTAAAAGCATATATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGGTAGTACTAATTAACTGTAATCCATTTTCATTATCCCATCTCGAAAGGACAAGGTGTT                             ]


>consensus_6998#0 GGCCCCGGCGGCGGGTCCCACNAGGTCGGCCACGACTGGGTGCCCCGGCCGGGCCCCGGC CCCCCCCGGCTGGANAAGCTCATGGACAGGANCGTCAGGTCGGAGGCCCTCCGTCAACAG CCAGTGCAAGTAGCTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATC ACTCACTGGTTAATCTTAATCTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTT ACCCTACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAAACTTAAAAGCATAT ATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAA TTAACTGTAATCCATTTTCATTATCCCATCTCGAAAGGACAAGGTGTTTTCTGTGGTTAA AAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)