cluster # 7000

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Oryza sativa
cluster # 7000 cluster # 7000 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7000#0 length = 379 sequences # 4

consensusID : consensus_7000#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 379
fasta sequence

                              [GTCAAACGAGCAAACGGCAAAAGAATTCACACTGGTCCCAACACATAGTACAGAGCATTTGCTTCATTGTACAGTGGCGATACAAGCTGAATACCAGACATTTTTTTAGCCACCGGAAAATTTCGTCATTATATGTAGGCAGCCATCCGCTGCCGTGAGATTATTACAGATTTTTTTCCCCACAAGAATTAATTTACACACCAATCTGCTCAAATTTGATTCTGTAACATTTCGTATCATCATCATCACAAGATGAAAGCCTCATCTGCATCTGCATCTGCAACTGCAAAGCTGCAAGCCTAGCCTGCTCTCTTCAGGTAAGCCATCACGCCAAGGCCTGCAACAAGAGCTGCTCCTGCAGCCACAGCGCTGTAGGCTG]

[+] EMBL CB637434             [GTCAAACGAGCATTCGGCAAAAGAATTCACACTGGTCCCAACACATAGTACAGAGCATTTGCTTCATTGTACAGTGGCGATACAAGCTGAATACCAGACATTTTTTTAGCCACCGGAAAATTTCGTCATTATATGTAGGCAGCCATCCGCTGCCGTGAGATTATTACAGATTTTTTTCCCCACAAGAATTAATTTACACACCAATCTGCTCAAATTTGATTCTGTAACATTTCGTATCATCATCATCACAAGATGAAAGCCTCATCTGCATCTGCATCTGCAACTGCAAAGCTGCAAGCCTAGCCTGCTCTCTTCAGGTAAGCCATCACGCCAAGGCCTGCAACAAGAGCTGCTCCTGCAGCCACAGCGCTGTAGGCT ]
[+] EMBL CB646966             [  gcAACGAGCAAACGGCAAAAGAATTCACACT GCCCTTACACATAGTACAGAGCATTTGCTTCATTGTACAGTGGCGATACAAGCTGAATACCAGACATTTTTTTAGCCACCGGAAAATTTCGTCATTATATGTAGGCAGCCATCCGCTGCCGTGAGATTATTACAGATTTTTTTCCCCACAAGAATTAATTTACACACCAATCTGCTCAAATTTGATTCTGTAACATTTCGTATCATCATCATCACAAGATGAAAGCCTCATCTGCATCTGCATCTGCAACTGCAAAGCTGCAAGCCTAGCCTGCTCTCTTCAGGTAAGCCATCACGCCAAGGCCTGCAACAAGAGCTGCTCCTGCAGCCACAGCGCTGTAGGCT ]
[+] EMBL CB637433             [         GCAAACGGCAAAAGAATTCACACTGGTCCCAACACATAGTACAGAGCATTTGCTTCATTGTACAGTGGCGATACAAGCTGAATACCAGACATTTTTTTAGCCACCGGAAAATTTCGTCATTATATGTAGGCAGCCATCCGCTGCCGTGAGATTATTACAGATTTTTTTCCCCACAAGAATTAATTTACACACCAATCTGCTCAAATTTGATTCTGTAACATTTCGTATCATCATCATCACAAGATGAAAGCCTCATCTGCATCTGCATCTGCAACTGCAAAGCTGCAAGCCTAGCCTGCTCTCTTCAGGTAAGCCATCACGCCAAGGCCTGCAACAAGAGCTGCTCCTGCAGCCACAGCGCTGTAGGCT ]
[-] EMBL AK067520             [                                                       CATTTGCTTCATTGTACAGTGGCGATACAAGCTGAATACCAGACATTTTTTTAGCCACCGGAAAATTTCGTCATTATATGTAGGCAGCCATCCGCTGCCGTGAGATTATTACAGATTTTTTTCCCCACAAGAATTAATTTACACACCAATCTGCTCAAATTTGATTCTGTAACATTTCGTATCATCATCATCACAAGATGAAAGCCTCATCTGCATCTGCATCTGCAACTGCAAAGCTGCAAGCCTAGCCTGCTCTCTTCAGGTAAGCCATCACGCCAAGGCCTGCAACAAGAGCTGCTCCTGCAGCCACAGCGCTGTAGGCTG]




>consensus_7000#0
GTCAAACGAGCAAACGGCAAAAGAATTCACACTGGTCCCAACACATAGTACAGAGCATTT
GCTTCATTGTACAGTGGCGATACAAGCTGAATACCAGACATTTTTTTAGCCACCGGAAAA
TTTCGTCATTATATGTAGGCAGCCATCCGCTGCCGTGAGATTATTACAGATTTTTTTCCC
CACAAGAATTAATTTACACACCAATCTGCTCAAATTTGATTCTGTAACATTTCGTATCAT
CATCATCACAAGATGAAAGCCTCATCTGCATCTGCATCTGCAACTGCAAAGCTGCAAGCC
TAGCCTGCTCTCTTCAGGTAAGCCATCACGCCAAGGCCTGCAACAAGAGCTGCTCCTGCA
GCCACAGCGCTGTAGGCTG

clustalw multiple alignements is not computed in this case