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Oryza sativa
cluster # 7004 cluster # 7004       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7004#0 length = 2215 sequences # 2  
consensus_7004#1 length = 1026 sequences # 1  
consensus_7004#2 length = 476 sequences # 1  

consensusID : consensus_7004#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2215
fasta sequence
                              [CTGAATTCTGAACGAGCACCAAACACAAGCGCGGAAGCCGCGGCGGCGGAGGCGGCGAGCCGACGAGCCGCCGGCGAGTTCCGCCGATGCCGCCGAAGCGGGGCGCCGCGCCCGCGGCGGCCTTCGAGTACTGCGAGCTGTGCCGCCGCAACCACGACCAGGGCCGCCGCCACCGCTACTTCCCCGCCCACCGCGCCGCCCTCGCCGCCGCGCTCTCCCGCTTCCGCTCCAAGCTCCTCGACCTGCGCCGCGCGCTCCGCCACCCGTCCTCCGCGGCCCGCTCCCGCCTCTGGTGCCCCTTCTGCTCCGCCGACCTCGTCGACCTCGACAGCCGCTTCGCTTGTAGCAATGCTATTTATCATCTCGCAAGCCAGGATCACCTAAATGGCGTGAAGGCTTTCCTGCAAAAGCATGGTGGTGGGATGGATCAGGTGGATTCGTTTAGGATTTCGGAGGATGAGCTTGCTAAGTGGGAGAAGTGCTGCGAGTCTTCGAGTACAGAACAAGAGACGTCGACCGAAGGGTTGATTGGACCATCTCTGGGGCCACTGAAAGATATCCGAAATAAATCTACCTCTAAACATTTGGATAATTTTGCAGAAACTTACATCCCGTCTTCTAGTAATACTGCATCTAATGTTGTTATGCCTTTACAAAGTCCTACTAATGGGGCATACTACCCCAATAGTACAGCATGCCAGGGATCTTCCTCCTTTGGAAGTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACCTTGTGGATCGGTTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAGTGCAGGCACAAAAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATCGGTTTCTTGTTCTGTTCATGTCCAACAGAGAAACTCTGGTGGAAATTCCAGTCAGGGTACTACACACTTTTACAGTTTTTCTAATATATATATATATATATTTGTAACGATTTCTGTTGAAGCATGTCACTAATTTGGATGCAGAAAGAGGCTGCAGCTCTAGCAAATGAAAGATATCTATTTTTAGTTCCTTATTGTTGTGTGAAATTTAACATAATATCGTTATGTTATGAAGGCTTGAAAGCAAATGTGCACATGGGTGCTCCTCCTCCCTGGTTAGAAGCTAGCGAGCGTGATCAGGAGAATGAGTCACTTAGTGGTTATGCTCGTCCATCCTCTCGGAAAGGAAAATCTGGAAAGCTTAACCCAAAGCGTGTAGGAGCTGCATGGGCAGAGAGGAGAAGAGCAGAAATGGAGATGGAAAAACGAGGTGAACTTGTTCCAGAAACATCTGATTCTAGTTGGCTCCCTAACTTTGGTGGTGTCTGGCAATCTGGTACAAGAAAGGAATCAAGGAAAGAGTTTGAGAAAAACCATAAGCCTCACGAAGAGAAGAGCAACAAGTTGTCCCTTGAGATGAAACCATATATAAGCAAACGGATGCGCGTAGGTTCCAATAAAGGTGAACAGTCAGACATTGATGTAGAGCAGTGAACAGATCTACATGGTTGCCAGATGGTTTGTGATTGTGGTCACGGTTTTCTGTAGTTCTGCTAGGACGCAGCCGCTTGTCTTTTTTGGGGGTCCAAAACTTTGAATTGCGTTGCGGTTGCTGAAAGAGTCGATGTTATTGCCACATGCCTGAAAAGGATGATATTTGGTGTGGAAGTGGAATGCCATATGCAAGTGTAATAAAAGAAGGGAGCATTTCTTTCCAAGAAGAGAGCTGTCCTCTGGAGTCCGGAATGTTGGTTGGTGCGCTCAACTGTGTGGAGATCCGTGCCTTGTCGCTGCAACTTGATGTCCTTGCGTTTTGCACCTGATCCGATTACATGTCCGTGCATTTGCTCCTCCTGATCGGATAACATAGAAAGCTTGAAACAGAGATCTACCTGTAGGAGAATACTCCTTCGTAGCAACTAGCTATCGAGCTGATTAGATTGATTGATTTTTGATTCCCCTGGGCTAATTGGAGAATTGTTATGCCTGTAGGGTGTCCATGTCACTGGATTTTTCCCAATCAGATGACTTTTAGCACAAAACTGGCATAATATTTGCTTTAAATTGTAACTCCATCCAATGGAAGGATGCACTCAGAAGTACAGTATAGTAGGAGTAACAGCCACAGAAGTTGGTTGTTGACAAGGCAAAGGTAGTACTAGTAAT]

[+] EMBL AK066669             [CTGAATTCTGAACGAGCACCAAACACAAGCGCGGAAGCCGCGGCGGCGGAGGCGGCGAGCCGACGAGCCGCCGGCGAGTTCCGCCGATGCCGCCGAAGCGGGGCGCCGCGCCCGCGGCGGCCTTCGAGTACTGCGAGCTGTGCCGCCGCAACCACGACCAGGGCCGCCGCCACCGCTACTTCCCCGCCCACCGCGCCGCCCTCGCCGCCGCGCTCTCCCGCTTCCGCTCCAAGCTCCTCGACCTGCGCCGCGCGCTCCGCCACCCGTCCTCCGCGGCCCGCTCCCGCCTCTGGTGCCCCTTCTGCTCCGCCGACCTCGTCGACCTCGACAGCCGCTTCGCTTGTAGCAATGCTATTTATCATCTCGCAAGCCAGGATCACCTAAATGGCGTGAAGGCTTTCCTGCAAAAGCATGGTGGTGGGATGGATCAGGTGGATTCGTTTAGGATTTCGGAGGATGAGCTTGCTAAGTGGGAGAAGTGCTGCGAGTCTTCGAGTACAGAACAAGAGACGTCGACCGAAGGGTTGATTGGACCATCTCTGGGGCCACTGAAAGATATCCGAAATAAATCTACCTCTAAACATTTGGATAATTTTGCAGAAACTTACATCCCGTCTTCTAGTAATACTGCATCTAATGTTGTTATGCCTTTACAAAGTCCTACTAATGGGGCATACTACCCCAATAGTACAGCATGCCAGGGATCTTCCTCCTTTGGAAGTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACCTTGTGGATCGGTTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAGTGCAGGCACAAAAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATCGGTTTCTTGTTCTGTTCATGTCCAACAGAGAAACTCTGGTGGAAATTCCAGTCAGGGTACTACACACTTTTACAGTTTTTCTAATATATATATATATATATTTGTAACGATTTCTGTTGAAGCATGTCACTAATTTGGATGCAGAAAGAGGCTGCAGCTCTAGCAAATGAAAGATATCTATTTTTAGTTCCTTATTGTTGTGTGAAATTTAACATAATATCGTTATGTTATGAAGGCTTGAAAGCAAATGTGCACATGGGTGCTCCTCCTCCCTGGTTAGAAGCTAGCGAGCGTGATCAGGAGAATGAGTCACTTAGTGGTTATGCTCGTCCATCCTCTCGGAAAGGAAAATCTGGAAAGCTTAACCCAAAGCGTGTAGGAGCTGCATGGGCAGAGAGGAGAAGAGCAGAAATGGAGATGGAAAAACGAGGTGAACTTGTTCCAGAAACATCTGATTCTAGTTGGCTCCCTAACTTTGGTGGTGTCTGGCAATCTGGTACAAGAAAGGAATCAAGGAAAGAGTTTGAGAAAAACCATAAGCCTCACGAAGAGAAGAGCAACAAGTTGTCCCTTGAGATGAAACCATATATAAGCAAACGGATGCGCGTAGGTTCCAATAAAGGTGAACAGTCAGACATTGATGTAGAGCAGTGAACAGATCTACATGGTTGCCAGATGGTTTGTGATTGTGGTCACGGTTTTCTGTAGTTCTGCTAGGACGCAGCCGCTTGTCTTTTTTGGGGGTCCAAAACTTTGAATTGCGTTGCGGTTGCTGAAAGAGTCGATGTTATTGCCACATGCCTGAAAAGGATGATATTTGGTGTGGAAGTGGAATGCCATATGCAAGTGTAATAAAAGAAGGGAGCATTTCTTTCCAAGAAGAGAGCTGTCCTCTGGAGTCCGGAATGTTGGTTGGTGCGCTCAACTGTGTGGAGATCCGTGCCTTGTCGCTGCAACTTGATGTCCTTGCGTTTTGCACCTGATCCGATTACATGTCCGTGCATTTGCTCCTCCT                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB637763             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGTAATAAAAGAAGGGAGCATTTCTTTCCAAGAAGAGAGCTGTCCTCTGGAGTCCGGAATGTTGGTTGGTGCGCTCAACTGTGTGGAGATCCGTGCCTTGTCGCTGCAACTTGATGTCCTTGCGTTTTGCACCTGATCCGATTACATGTCCGTGCATTTGCTCCTCCTGATCGGATAACATAGAAAGCTTGAAACAGAGATCTACCTGTAGGAGAATACTCCTTCGTAGCAACTAGCTATCGAGCTGATTAGATTGATTGATTTTTGATTCCCCTGGGCTAATTGGAGAATTGTTATGCCTGTAGGGTGTCCATGTCACTGGATTTTTCCCAATCAGATGACTTTTAGCACAAAACTGGCATAATATTTGCTTTAAATTGTAACTCCATCCAATGGAAGGATGCACTCAGAAGTACAGTATAGTAGGAGTAACAGCCACAGAAGTTGGTTGTTGACAAGGCAAAGGTAGTACTAGTAAT]


>consensus_7004#0 CTGAATTCTGAACGAGCACCAAACACAAGCGCGGAAGCCGCGGCGGCGGAGGCGGCGAGC CGACGAGCCGCCGGCGAGTTCCGCCGATGCCGCCGAAGCGGGGCGCCGCGCCCGCGGCGG CCTTCGAGTACTGCGAGCTGTGCCGCCGCAACCACGACCAGGGCCGCCGCCACCGCTACT TCCCCGCCCACCGCGCCGCCCTCGCCGCCGCGCTCTCCCGCTTCCGCTCCAAGCTCCTCG ACCTGCGCCGCGCGCTCCGCCACCCGTCCTCCGCGGCCCGCTCCCGCCTCTGGTGCCCCT TCTGCTCCGCCGACCTCGTCGACCTCGACAGCCGCTTCGCTTGTAGCAATGCTATTTATC ATCTCGCAAGCCAGGATCACCTAAATGGCGTGAAGGCTTTCCTGCAAAAGCATGGTGGTG GGATGGATCAGGTGGATTCGTTTAGGATTTCGGAGGATGAGCTTGCTAAGTGGGAGAAGT GCTGCGAGTCTTCGAGTACAGAACAAGAGACGTCGACCGAAGGGTTGATTGGACCATCTC TGGGGCCACTGAAAGATATCCGAAATAAATCTACCTCTAAACATTTGGATAATTTTGCAG AAACTTACATCCCGTCTTCTAGTAATACTGCATCTAATGTTGTTATGCCTTTACAAAGTC CTACTAATGGGGCATACTACCCCAATAGTACAGCATGCCAGGGATCTTCCTCCTTTGGAA GTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACCTTGTGGATCGG TTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAGTGCAGGCACAA AAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATCGGTTTCTTGTT CTGTTCATGTCCAACAGAGAAACTCTGGTGGAAATTCCAGTCAGGGTACTACACACTTTT ACAGTTTTTCTAATATATATATATATATATTTGTAACGATTTCTGTTGAAGCATGTCACT AATTTGGATGCAGAAAGAGGCTGCAGCTCTAGCAAATGAAAGATATCTATTTTTAGTTCC TTATTGTTGTGTGAAATTTAACATAATATCGTTATGTTATGAAGGCTTGAAAGCAAATGT GCACATGGGTGCTCCTCCTCCCTGGTTAGAAGCTAGCGAGCGTGATCAGGAGAATGAGTC ACTTAGTGGTTATGCTCGTCCATCCTCTCGGAAAGGAAAATCTGGAAAGCTTAACCCAAA GCGTGTAGGAGCTGCATGGGCAGAGAGGAGAAGAGCAGAAATGGAGATGGAAAAACGAGG TGAACTTGTTCCAGAAACATCTGATTCTAGTTGGCTCCCTAACTTTGGTGGTGTCTGGCA ATCTGGTACAAGAAAGGAATCAAGGAAAGAGTTTGAGAAAAACCATAAGCCTCACGAAGA GAAGAGCAACAAGTTGTCCCTTGAGATGAAACCATATATAAGCAAACGGATGCGCGTAGG TTCCAATAAAGGTGAACAGTCAGACATTGATGTAGAGCAGTGAACAGATCTACATGGTTG CCAGATGGTTTGTGATTGTGGTCACGGTTTTCTGTAGTTCTGCTAGGACGCAGCCGCTTG TCTTTTTTGGGGGTCCAAAACTTTGAATTGCGTTGCGGTTGCTGAAAGAGTCGATGTTAT TGCCACATGCCTGAAAAGGATGATATTTGGTGTGGAAGTGGAATGCCATATGCAAGTGTA ATAAAAGAAGGGAGCATTTCTTTCCAAGAAGAGAGCTGTCCTCTGGAGTCCGGAATGTTG GTTGGTGCGCTCAACTGTGTGGAGATCCGTGCCTTGTCGCTGCAACTTGATGTCCTTGCG TTTTGCACCTGATCCGATTACATGTCCGTGCATTTGCTCCTCCTGATCGGATAACATAGA AAGCTTGAAACAGAGATCTACCTGTAGGAGAATACTCCTTCGTAGCAACTAGCTATCGAG CTGATTAGATTGATTGATTTTTGATTCCCCTGGGCTAATTGGAGAATTGTTATGCCTGTA GGGTGTCCATGTCACTGGATTTTTCCCAATCAGATGACTTTTAGCACAAAACTGGCATAA TATTTGCTTTAAATTGTAACTCCATCCAATGGAAGGATGCACTCAGAAGTACAGTATAGT AGGAGTAACAGCCACAGAAGTTGGTTGTTGACAAGGCAAAGGTAGTACTAGTAAT



consensusID : consensus_7004#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1026
fasta sequence
                              [AGGGATCTTCCTCCTTTGGAAGTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACCTTGTGGATCGGTTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAGTGCAGGCACAAAAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATCGGTTTCTTGTTCTGTTCATGTCCAACAGAGAAACTCTGGTGGAAATTCCAGTCAGGGCTTGAAAGCAAATGTGCACATGGGTGCTCCTCCTCCCTGGTTAGAAGCTAGCGAGCGTGATCAGGAGAATGAGTCACTTAGTGGTTATGCTCGTCCATCCTCTCGGAAAGGAAAATCTGGAAAGCTTAACCCAAAGCGTGTAGGAGCTGCATGGGCAGAGAGGAGAAGAGCAGAAATGGAGATGGAAAAACGAGGTGAACTTGTTCCAGAAACATCTGATTCTAGTTGGCTCCCTAACTTTGGTGGTGTCTGGCAATCTGGTACAAGAAAGGAATCAAGGAAAGAGTTTGAGAAAAACCATAAGCCTCACGAAGAGAAGAGCAACAAGTTGTCCCTTGAGATGAAACCATATATAAGCAAACGGATGCGCGTAGGTTCCAATAAAGGTGAACAGTCAGACATTGATGTAGAGCAGTGAACAGATCTACATGGTTGCCAGATGATTTGTGATTGTGGTCACGGTTTTCTGTAGTTCTGCTAGGACGCAGCCGCTTGTCTTTTTTGGGGGTCCAAAACTTTGAATTGCGTTGCGGTTGCTGAAAGAGTCGATGTTATTGCCACATGCCTGAAAAGGATGATATTTGGTGTGGAAGTGGAATGCCATATGCAAGTGTAATAAAAGAAGGGAGCATTTCTTTCCAAGAAGAGAGCTGTCCTCTGGAGTCCGGAATGTTGGTTGGTGCGCTCAACTGTGTGGAGATCCGTGCCTTGTCGCTGCAACTTGATGTCCTTGCGTTTTGCACCTGATCCGATTACATGTCCGTGCATTTGCTCCTCCT]

[+] EMBL AK059251             [AGGGATCTTCCTCCTTTGGAAGTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACCTTGTGGATCGGTTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAGTGCAGGCACAAAAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATCGGTTTCTTGTTCTGTTCATGTCCAACAGAGAAACTCTGGTGGAAATTCCAGTCAGGGCTTGAAAGCAAATGTGCACATGGGTGCTCCTCCTCCCTGGTTAGAAGCTAGCGAGCGTGATCAGGAGAATGAGTCACTTAGTGGTTATGCTCGTCCATCCTCTCGGAAAGGAAAATCTGGAAAGCTTAACCCAAAGCGTGTAGGAGCTGCATGGGCAGAGAGGAGAAGAGCAGAAATGGAGATGGAAAAACGAGGTGAACTTGTTCCAGAAACATCTGATTCTAGTTGGCTCCCTAACTTTGGTGGTGTCTGGCAATCTGGTACAAGAAAGGAATCAAGGAAAGAGTTTGAGAAAAACCATAAGCCTCACGAAGAGAAGAGCAACAAGTTGTCCCTTGAGATGAAACCATATATAAGCAAACGGATGCGCGTAGGTTCCAATAAAGGTGAACAGTCAGACATTGATGTAGAGCAGTGAACAGATCTACATGGTTGCCAGATGATTTGTGATTGTGGTCACGGTTTTCTGTAGTTCTGCTAGGACGCAGCCGCTTGTCTTTTTTGGGGGTCCAAAACTTTGAATTGCGTTGCGGTTGCTGAAAGAGTCGATGTTATTGCCACATGCCTGAAAAGGATGATATTTGGTGTGGAAGTGGAATGCCATATGCAAGTGTAATAAAAGAAGGGAGCATTTCTTTCCAAGAAGAGAGCTGTCCTCTGGAGTCCGGAATGTTGGTTGGTGCGCTCAACTGTGTGGAGATCCGTGCCTTGTCGCTGCAACTTGATGTCCTTGCGTTTTGCACCTGATCCGATTACATGTCCGTGCATTTGCTCCTCCT]


>consensus_7004#1 AGGGATCTTCCTCCTTTGGAAGTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGC CCATCATACCTTGTGGATCGGTTGCATTACATGAACAACAGGTTATGCTGGGTACAGACT TGTTTCAAAGTGCAGGCACAAAAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGAC CAAATTCATCGGTTTCTTGTTCTGTTCATGTCCAACAGAGAAACTCTGGTGGAAATTCCA GTCAGGGCTTGAAAGCAAATGTGCACATGGGTGCTCCTCCTCCCTGGTTAGAAGCTAGCG AGCGTGATCAGGAGAATGAGTCACTTAGTGGTTATGCTCGTCCATCCTCTCGGAAAGGAA AATCTGGAAAGCTTAACCCAAAGCGTGTAGGAGCTGCATGGGCAGAGAGGAGAAGAGCAG AAATGGAGATGGAAAAACGAGGTGAACTTGTTCCAGAAACATCTGATTCTAGTTGGCTCC CTAACTTTGGTGGTGTCTGGCAATCTGGTACAAGAAAGGAATCAAGGAAAGAGTTTGAGA AAAACCATAAGCCTCACGAAGAGAAGAGCAACAAGTTGTCCCTTGAGATGAAACCATATA TAAGCAAACGGATGCGCGTAGGTTCCAATAAAGGTGAACAGTCAGACATTGATGTAGAGC AGTGAACAGATCTACATGGTTGCCAGATGATTTGTGATTGTGGTCACGGTTTTCTGTAGT TCTGCTAGGACGCAGCCGCTTGTCTTTTTTGGGGGTCCAAAACTTTGAATTGCGTTGCGG TTGCTGAAAGAGTCGATGTTATTGCCACATGCCTGAAAAGGATGATATTTGGTGTGGAAG TGGAATGCCATATGCAAGTGTAATAAAAGAAGGGAGCATTTCTTTCCAAGAAGAGAGCTG TCCTCTGGAGTCCGGAATGTTGGTTGGTGCGCTCAACTGTGTGGAGATCCGTGCCTTGTC GCTGCAACTTGATGTCCTTGCGTTTTGCACCTGATCCGATTACATGTCCGTGCATTTGCT CCTCCT



consensusID : consensus_7004#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 476
fasta sequence
                              [GAGGCAAAGTCCTACTAATGGGGCATACTACCCCAATAGTACAGCATGCCAGGGATCTTCCTCCTTTGGAAGTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACCTTGTGGATCGGTTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAGTGCAGGCACAAAAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATCGGTTTCTTGTTCTGTTCATGTAAGTAAGCAACACGTGCACATGCGTATATTCCATAAAAAGGTATTGCAAATGGTCCTTTGGATGTTATCCATTATTGTGTTTCATTGCTGTGAAATTTGAGGCAAAGCTAACAACTAAGCGAGTGTTTTCTATTCAGAGTTTCGAACAAGGAAAAAAAATTGATTTAGTCGATGTCGTTCAAAGCAGGAGCATGTCAATTTTATCTTTTGGGTAT]

[+] EMBL CF305682             [GAGGCAAAGTCCTACTAATGGGGCATACTACCCCAATAGTACAGCATGCCAGGGATCTTCCTCCTTTGGAAGTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACCTTGTGGATCGGTTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAGTGCAGGCACAAAAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATCGGTTTCTTGTTCTGTTCATGTAAGTAAGCAACACGTGCACATGCGTATATTCCATAAAAAGGTATTGCAAATGGTCCTTTGGATGTTATCCATTATTGTGTTTCATTGCTGTGAAATTTGAGGCAAAGCTAACAACTAAGCGAGTGTTTTCTATTCAGAGTTTCGAACAAGGAAAAAAAATTGATTTAGTCGATGTCGTTCAAAGCAGGAGCATGTCAATTTTATCTTTTGGGTAT]


>consensus_7004#2 GAGGCAAAGTCCTACTAATGGGGCATACTACCCCAATAGTACAGCATGCCAGGGATCTTC CTCCTTTGGAAGTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACC TTGTGGATCGGTTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAG TGCAGGCACAAAAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATC GGTTTCTTGTTCTGTTCATGTAAGTAAGCAACACGTGCACATGCGTATATTCCATAAAAA GGTATTGCAAATGGTCCTTTGGATGTTATCCATTATTGTGTTTCATTGCTGTGAAATTTG AGGCAAAGCTAACAACTAAGCGAGTGTTTTCTATTCAGAGTTTCGAACAAGGAAAAAAAA TTGATTTAGTCGATGTCGTTCAAAGCAGGAGCATGTCAATTTTATCTTTTGGGTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7004#0      CTGAATTCTGAACGAGCACCAAACACAAGCGCGGAAGCCGCGGCGGCGGAGGCGGCGAGC 60
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      CGACGAGCCGCCGGCGAGTTCCGCCGATGCCGCCGAAGCGGGGCGCCGCGCCCGCGGCGG 120
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      CCTTCGAGTACTGCGAGCTGTGCCGCCGCAACCACGACCAGGGCCGCCGCCACCGCTACT 180
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      TCCCCGCCCACCGCGCCGCCCTCGCCGCCGCGCTCTCCCGCTTCCGCTCCAAGCTCCTCG 240
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      ACCTGCGCCGCGCGCTCCGCCACCCGTCCTCCGCGGCCCGCTCCCGCCTCTGGTGCCCCT 300
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      TCTGCTCCGCCGACCTCGTCGACCTCGACAGCCGCTTCGCTTGTAGCAATGCTATTTATC 360
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      ATCTCGCAAGCCAGGATCACCTAAATGGCGTGAAGGCTTTCCTGCAAAAGCATGGTGGTG 420
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      GGATGGATCAGGTGGATTCGTTTAGGATTTCGGAGGATGAGCTTGCTAAGTGGGAGAAGT 480
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      GCTGCGAGTCTTCGAGTACAGAACAAGAGACGTCGACCGAAGGGTTGATTGGACCATCTC 540
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      TGGGGCCACTGAAAGATATCCGAAATAAATCTACCTCTAAACATTTGGATAATTTTGCAG 600
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      AAACTTACATCCCGTCTTCTAGTAATACTGCATCTAATGTTGTTATGCCTTTACAAAGTC 660
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      -------------------------------------------------GAGGCAAAGTC 11
                                                                                  

consensus_7004#0      CTACTAATGGGGCATACTACCCCAATAGTACAGCATGCCAGGGATCTTCCTCCTTTGGAA 720
consensus_7004#1      ---------------------------------------AGGGATCTTCCTCCTTTGGAA 21
consensus_7004#2      CTACTAATGGGGCATACTACCCCAATAGTACAGCATGCCAGGGATCTTCCTCCTTTGGAA 71
                                                             *********************

consensus_7004#0      GTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACCTTGTGGATCGG 780
consensus_7004#1      GTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACCTTGTGGATCGG 81
consensus_7004#2      GTATTCCGTATTCTGCTCCATTTGAGACTTTCGGAGTGCCCATCATACCTTGTGGATCGG 131
                      ************************************************************

consensus_7004#0      TTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAGTGCAGGCACAA 840
consensus_7004#1      TTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAGTGCAGGCACAA 141
consensus_7004#2      TTGCATTACATGAACAACAGGTTATGCTGGGTACAGACTTGTTTCAAAGTGCAGGCACAA 191
                      ************************************************************

consensus_7004#0      AAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATCGGTTTCTTGTT 900
consensus_7004#1      AAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATCGGTTTCTTGTT 201
consensus_7004#2      AAATGAAAGGTGGTCAACTTACTATCCTCGGAAATGGACCAAATTCATCGGTTTCTTGTT 251
                      ************************************************************

consensus_7004#0      CTGTTCATGTCCAACAGAGAAACT----CTGGTGGAAATTCCAGTCAGGGTACTACACAC 956
consensus_7004#1      CTGTTCATGTCCAACAGAGAAACT----CTGGTGGAAATTCCAGTCAGGG---------- 247
consensus_7004#2      CTGTTCATGTAAGTAAGCAACACGTGCACATGCGTATATTCCATAAAAAG---------- 301
                      **********     **  * **     *  * * * ******   *  *          

consensus_7004#0      TTTTACAGTTTTTCTAATATATATATATATATATTTGTAACGATTTCTGTTGAAGCATGT 1016
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      CACTAATTTGGATGCAGAAAGAGGCTGCAGCTCTAGCAAATGAAAGATATCTATTTTTAG 1076
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      TTCCTTATTGTTGTGTGAAATTTAACATAATATCGTTATGTTATGAAGGCTTGAAAGCAA 1136
consensus_7004#1      -------------------------------------------------CTTGAAAGCAA 258
consensus_7004#2      ---------------------------------------------------GTATTGCAA 310
                                                                           *  ****

consensus_7004#0      ATGTGCACATGGGTGCTCCTCCTCCCTGG--TTAGAAGCTAGCGAGCGTGATCAGGAGAA 1194
consensus_7004#1      ATGTGCACATGGGTGCTCCTCCTCCCTGG--TTAGAAGCTAGCGAGCGTGATCAGGAGAA 316
consensus_7004#2      ATGGTCCTTTGGATGTTATCCATTATTGTGTTTCATTGCTGTGAAATTTGA--GGCAAAG 368
                      ***  *   *** ** *   * *   **   **    ***    *   ***   * * * 

consensus_7004#0      TGAGTCACTTAGTGGTTATGCTC-GTCCATCCTCTCGGAAAGGAAAATCTGGAAAGCTTA 1253
consensus_7004#1      TGAGTCACTTAGTGGTTATGCTC-GTCCATCCTCTCGGAAAGGAAAATCTGGAAAGCTTA 375
consensus_7004#2      CTAACAACTAAGCGAGTGTTTTCTATTCAGAGTTTCGAACAAGGAAAAAAAATTGATTTA 428
                        *   *** ** *  * *  **  * **   * *** * * * ***          ***

consensus_7004#0      ACCCAAAGCGTGTAGGAGCTGCATGGGCAGAGAGGAGAAGAGCAGAAATGGAGATGGAAA 1313
consensus_7004#1      ACCCAAAGCGTGTAGGAGCTGCATGGGCAGAGAGGAGAAGAGCAGAAATGGAGATGGAAA 435
consensus_7004#2      GTCGATGTCGTTCAAA----GCAGGAGCAT-GTCAATTTTATCTTT--TGGGTAT----- 476
                        * *   ***  *      *** * ***  *   *    * *     ***  **     

consensus_7004#0      AACGAGGTGAACTTGTTCCAGAAACATCTGATTCTAGTTGGCTCCCTAACTTTGGTGGTG 1373
consensus_7004#1      AACGAGGTGAACTTGTTCCAGAAACATCTGATTCTAGTTGGCTCCCTAACTTTGGTGGTG 495
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      TCTGGCAATCTGGTACAAGAAAGGAATCAAGGAAAGAGTTTGAGAAAAACCATAAGCCTC 1433
consensus_7004#1      TCTGGCAATCTGGTACAAGAAAGGAATCAAGGAAAGAGTTTGAGAAAAACCATAAGCCTC 555
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      ACGAAGAGAAGAGCAACAAGTTGTCCCTTGAGATGAAACCATATATAAGCAAACGGATGC 1493
consensus_7004#1      ACGAAGAGAAGAGCAACAAGTTGTCCCTTGAGATGAAACCATATATAAGCAAACGGATGC 615
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      GCGTAGGTTCCAATAAAGGTGAACAGTCAGACATTGATGTAGAGCAGTGAACAGATCTAC 1553
consensus_7004#1      GCGTAGGTTCCAATAAAGGTGAACAGTCAGACATTGATGTAGAGCAGTGAACAGATCTAC 675
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      ATGGTTGCCAGATGGTTTGTGATTGTGGTCACGGTTTTCTGTAGTTCTGCTAGGACGCAG 1613
consensus_7004#1      ATGGTTGCCAGATGATTTGTGATTGTGGTCACGGTTTTCTGTAGTTCTGCTAGGACGCAG 735
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      CCGCTTGTCTTTTTTGGGGGTCCAAAACTTTGAATTGCGTTGCGGTTGCTGAAAGAGTCG 1673
consensus_7004#1      CCGCTTGTCTTTTTTGGGGGTCCAAAACTTTGAATTGCGTTGCGGTTGCTGAAAGAGTCG 795
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      ATGTTATTGCCACATGCCTGAAAAGGATGATATTTGGTGTGGAAGTGGAATGCCATATGC 1733
consensus_7004#1      ATGTTATTGCCACATGCCTGAAAAGGATGATATTTGGTGTGGAAGTGGAATGCCATATGC 855
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      AAGTGTAATAAAAGAAGGGAGCATTTCTTTCCAAGAAGAGAGCTGTCCTCTGGAGTCCGG 1793
consensus_7004#1      AAGTGTAATAAAAGAAGGGAGCATTTCTTTCCAAGAAGAGAGCTGTCCTCTGGAGTCCGG 915
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      AATGTTGGTTGGTGCGCTCAACTGTGTGGAGATCCGTGCCTTGTCGCTGCAACTTGATGT 1853
consensus_7004#1      AATGTTGGTTGGTGCGCTCAACTGTGTGGAGATCCGTGCCTTGTCGCTGCAACTTGATGT 975
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      CCTTGCGTTTTGCACCTGATCCGATTACATGTCCGTGCATTTGCTCCTCCTGATCGGATA 1913
consensus_7004#1      CCTTGCGTTTTGCACCTGATCCGATTACATGTCCGTGCATTTGCTCCTCCT--------- 1026
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      ACATAGAAAGCTTGAAACAGAGATCTACCTGTAGGAGAATACTCCTTCGTAGCAACTAGC 1973
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      TATCGAGCTGATTAGATTGATTGATTTTTGATTCCCCTGGGCTAATTGGAGAATTGTTAT 2033
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      GCCTGTAGGGTGTCCATGTCACTGGATTTTTCCCAATCAGATGACTTTTAGCACAAAACT 2093
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      GGCATAATATTTGCTTTAAATTGTAACTCCATCCAATGGAAGGATGCACTCAGAAGTACA 2153
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      GTATAGTAGGAGTAACAGCCACAGAAGTTGGTTGTTGACAAGGCAAAGGTAGTACTAGTA 2213
consensus_7004#1      ------------------------------------------------------------
consensus_7004#2      ------------------------------------------------------------
                                                                                  

consensus_7004#0      AT 2215
consensus_7004#1      --
consensus_7004#2      --
                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)