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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7006 cluster # 7006       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7006#0 length = 612 sequences # 4  

consensusID : consensus_7006#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 612
fasta sequence
                              [ATCATCCCATAAATCACAGGATGCTGCTGTGGGTTATCTTGTCCACATGCTGAAGTCTGCGCGGCCGCTGCGAGACTCTAGCAATTCACCTCTTACATCAAGGGTTGAATCTGTTGAAGGAGGTAATGTCAGTTCTTTCATGTCCCGTAGGACATCTGATGCGCTCGAGGAGCTTGAATCTTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATTGGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGGTTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCGCTTGTTATGAAATGAGGATATACAAGTCGTTCATTCTTAAACTCAAGCAGGATCATGATCCACCTTTGTTCATAGTGTTTTGTATGCAAGCAAAACCAACCGGATACATGCATCCTGCTGGAAGTATATGATGATCACCGTGTGCGTACGTGTGGGATTATGTAATCATACTAAACCTGTTTATTTATTCTATTTTAGCTCTTACCTTA-CTGCTCTTAATATACCAAACTGTTTGTTTATTGCTAAAAAAAA]

[+] EMBL AU174969             [ATCATCCCATAAATCACAGGATGCTGCTGTGGGTTATCTTGTCCACATGCTGAAGTCTGCGCGGCCGCTGCGAGACTCTAGCAATTCACCTCTTACATCAAGGGTTGAATCTGTTGAAGGAGGTAATGTCAGTTCTTTCATGTCCCGTAGGACATCTGATGCGCTCGAGGAGCTTGAATCTTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATTGGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGGTTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCGCTTGTTATGAAATGAGGATATACAAGTCGTTCATT                                                                                                                                                                                                                          ]
[+] EMBL BF430816             [                                                                             CTAGCAATTCACCTCTTACATCAAGGGTTGAATCTGTTGAAGGAGGTAATGTCAGTTCTTTCATGTCCCGTAGGACATCTGATGCGCTCGAGGAGCTTGAATCTTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATTGGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGGTTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCGCTTGTTATGAAATGAGGATATACAAGTCGTTCATTCTTAAACTCAAGCAGGATCATGATCCACCTTTGCTCATAGTGTTTTGTATGCAAGCAAAACCAACCGGATACATGCATCCTCCTGGAAGTATATGATGATCACCGCGTGCGTACGTGTGGGATTATGTAATCATACTAAACCTGTTTATTTATTCTATTTTAGCTCTTACCTTACCTGCTCTTAATATACCAAACTGTTTGTTTATTGCTA       ]
[+] EMBL CB964552             [                                                                              TAGCAATTCACCTCTTACATCAAGGGTTGAATCTGTTGAAGGAGGTAATGTCAGTTCTTTCATGTCCCGTAGGACATCTGATGCGCTCGAGGAGCTTGAATCTTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATTGGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGGTTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCGCTTGTTATGAAATGAGGATATACAAGTCGTTCATTCTTAAACTCAAGCAGGATCATGATCCACCTTTGTTCATAGTGTTTTGTATGCAAGCAAAACCAACCGGATACATGCATCCTGCTGGAAGTATATGATGATCACCGTGTGCGTACGTGTGGGATTATGTAATCATACTAAACCTGTTTATTTATTCTATTTTAGCTCTTACCTTA CTGCTCTTAATATACCAAACT                      ]
[+] EMBL AU174968             [                                                                                                                                                            TGATGCGCTCGAGGAGCTTGAATCTTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATTGGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGGTTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCGCTTGTTATGAAATGAGGATATACAAGTCGTTCATTCTTAAACTCAAGCAGGATCATGATCCACCTTTGTTCATAGTGTTTTGTATGCAAGCAAAACCAACCGGATACATGCATCCTGCTGGAAGTATATGATGATCACCGTGTGCGTACGTGTGGGATTATGTAATCATACTAAACCTGTTTATTTATTCTATTTTAGCTCTTACCTTA CTGCTCTTAATATACCAAACTGTTTGTTTATTGTTAAAAAAAA]


>consensus_7006#0 ATCATCCCATAAATCACAGGATGCTGCTGTGGGTTATCTTGTCCACATGCTGAAGTCTGC GCGGCCGCTGCGAGACTCTAGCAATTCACCTCTTACATCAAGGGTTGAATCTGTTGAAGG AGGTAATGTCAGTTCTTTCATGTCCCGTAGGACATCTGATGCGCTCGAGGAGCTTGAATC TTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATT GGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGG TTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCG CTTGTTATGAAATGAGGATATACAAGTCGTTCATTCTTAAACTCAAGCAGGATCATGATC CACCTTTGTTCATAGTGTTTTGTATGCAAGCAAAACCAACCGGATACATGCATCCTGCTG GAAGTATATGATGATCACCGTGTGCGTACGTGTGGGATTATGTAATCATACTAAACCTGT TTATTTATTCTATTTTAGCTCTTACCTTACTGCTCTTAATATACCAAACTGTTTGTTTAT TGCTAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)