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Oryza sativa
cluster # 7014 cluster # 7014       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7014#0 length = 971 sequences # 4  

consensusID : consensus_7014#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 971
fasta sequence
                              [TCGAAGAATCCCAAACCCTCTCCTCCTTCCATGGCGATTTGACCCCCAAACCCTAGCAATGCCCTAGACTAGGACTAGTAGGTAGCGGAAGGAAGCTGGAATCGGAAGGAAGGAAGGAAGGTGGGAGGGATGGGTTCGAAATCGAACACGGAGAGGGCGAGGAAGGCGCTGGAGGCCATGAAGCAGCTGGGTTTCTCCAAG-AAGGAGGCCACCCCTGTCCTCAAGAACCTCCTCAGGCTCTTCGGCAACAACTGGGAGCCCATCGAGGACGAGTGCTACCGCGCCCTCGCCGACGCCATCCTCGACCGCCACCAGGAGACCGCAGCTGACCGCGGCTGCAGCGCGACAAGGCCAACGCCGGACGATGATCATCACCCCCTTACCCTCTGTGGTGCTTCGCGCGACGTGGATACTGAGACCGACGAACCTTGAACCAAGAAGCCTAGGGCCACCAACTCAGATCCTCAATCGCCTCCATCCCTTACGGACGACCAAGATGTTCCTGCAGCTATCTCACCCCCATCCCATGGTGCTTCTCCTCAATTCCGTCCACAGACCAGGGCCTCTGCACGACTGCGCCAAGCTTCTCCTTCTTCTGTTACAGCAGCACACAAGAGGCCAAGACAGATGATGGATGAAGATTTCCAAGACTCTGCATTCCTCAGGGAACCCAAGCCTGAGCCCGATATCGATATGGACGCCATACAAGGCACTGCTGCTACATCAGACTGCCCAAATGCCCACCTTGGCCTCATTGACTATCCGCTCAATGCCAGCTCCTCAAGGGTTGCACTTCCTCTGGCATTGCTTCCACCTGATCAAAATGTTCCACAGATTTCAGGTCCTAAAAAAAGGGCAATTCAACCTTGTAGCAAGGTGAACACGGGGGAAGGATCTTCAGTCATTGATGTAGCATCATCCACTATGGGTGAGGTCAAAATGTCACTGAAATGCAGTGTTGACCCAAAGTT]

[+] EMBL C74891               [TCGAAGAATCCCAAACCCTCTCCTCCTTCCATGGCGATTTGACCCCCAAACCCTAGCAATGCCCTAGACTAGGACTAGTAGGTAGCGGAAGGAAGCTGGAATCGGAAGGAAGGAAGGAAGGTGGGAGGGATGGGTTCGAAATCGAACACGGAGAGGGCGAGGAAGGCGCTGGAGGCCATGAAGCAGCTGGGTTTCTCCAAG AAGGAGGCCACCCCTGTCCTCAAGAACCTCCTCAGGCTCTTCGGCAACAACTGGGAGCCCATCGAGGACGAGTGCTACCGCGCCCTCGCCGACGCCATCCTCGACCGCCACCAGGAGACCGCAGCTGACCGCGGCTGCAGCGCGACAAGGCCAACGCCGGACGATGATCATCACCCCCTTACCCTCTGTGGTGCTTCGCGCGACGTGGATACTGAGACCGACGAACCTTGAACCAAGAAGCCTAGGGCCACCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK067984             [   AAGAATCCCAAACCCTCTCCTCCTTCCATGGCGATTTGACCCCCAAACCCTAGCAATGCCCTAGACTAGGACTAGTAGGTAGCGGAAGGAAGCTGGAATCGGAAGGAAGGAAGGAAGGTGGGAGGGATGGGTTCGAAATCGAACACGGAGAGGGCGAGGAAGGCGCTGGAGGCCATGAAGCAGCTGGGTTTCTCCAAG AAGGAGGCCACCCCTGTCCTCAAGAACCTCCTCAGGCTCTTCGGCAACAACTGGGAGCCCATCGAGGACGAGTGCTACCGCGCCCTCGCCGACGCCATCCTCGACCGCCACCAGGAGACCGCAGCTGACCGCGGCTGCAGCGCGACAAGGCCAACGCCGGACGATGATCATCACCCCCTTACCCTCTGTGGTGCTTCGCGCGACGTGGATACTGAGACCGACGAACCTCGCACCAAGAAGCCTAGGGCCACCAACTCAGATCCTCAATCGCCTCCATCCCTTACGGACGACCAAGATGTTCCTGCAGCTATCTCACCCCCATCCCATGGTGCTTCTCCTCAATTCCGTCCACAGACCAGGGCCTCTGCACGACTGCGCCAAGCTTCTCCTTCTTCTGTTACAGCAGCACACAAGAGGCCAAGACAGATGATGGATGAAGATTTCCAAGACTCTGCATTCCTCAGGGAACCCAAGCCTGAGCCCGATATCGATATGGACGCCATACAAGGCACTGCTGCTACATCAGACTGCCCAAATGCCCACCTTGGCCTCATTGACTATCCGCTCAATGCCAGCTCCTCAAGGGTTGCACTTCCTCTGGCATTGCTTCCACCTGATCAAAATGTTCCACAGATTTCAGGTCCTAAAAAAAGGGCAATTCAACCTTGTAGCAAGGTGAACACGGGGGAAGGATCTTCAGTCATTGATGTAGCATCATCCACTATGGGTGAGGTCAAAATGTCACTGAAATGCAGTGTTGACCCAAAGTT]
[+] EMBL C25894               [           nacnCCTTCTCCTCCTTCCATGGCGATTTGACCCCCAAACCCTAGCAATGCCCTAGACTAGGACTAGTAGGTAGCGGAAGGAAGCTGGAATCGGAAGGAAGGAAGGAAGGTGGGAGGGATGGGTTCGAAATCGAACACGGAGAGGGCGAGGAAGGCGCTGGAGGCCATGAAGCAGCTGGGTTTCTCCAAG AAGGAGGCCACCCCTGTCCTCAAGAACCTCCTCAGGCTCTTCGGCAACAACTGGGAGCCCATCGAGGACGAGTGCTACCGCGCCCTCGCCGACGNCATCCTCGACCGCCACCAGGAGACCGCAGCTGACCGCGGCTTCAGCGCGACAAGGCCAACGCCGGACGATGATCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU108807             [                                   gtTTNGACCCCCAAACCCTAGCAATGCCCTAGACTAGGACTAGTAGGTAGCGGAAGGAAGCTGGAATCGGAAGGAAGGAANGAANGTGGGAGGGATGGGTTCGAAATCGAACACGGAGAGGGCGAGGAAGGCGCTGGAGGCCATGAAGCAGCTGGGTTTCTCCAAGAAACGAAGCCACCCCTGTCCTCAANAACCTCCTCAGGCTCTTCGGCAACAACTGGGAGCCCATCGAGGACGAGTGCTACCGCGCCCTCGCCGACGCCATCCTCGACCGCCACCAGGAGACCGCAGCTGACCGCGGCTGCAGCGCGACAAGGCCAACGCCGGACGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_7014#0 TCGAAGAATCCCAAACCCTCTCCTCCTTCCATGGCGATTTGACCCCCAAACCCTAGCAAT GCCCTAGACTAGGACTAGTAGGTAGCGGAAGGAAGCTGGAATCGGAAGGAAGGAAGGAAG GTGGGAGGGATGGGTTCGAAATCGAACACGGAGAGGGCGAGGAAGGCGCTGGAGGCCATG AAGCAGCTGGGTTTCTCCAAGAAGGAGGCCACCCCTGTCCTCAAGAACCTCCTCAGGCTC TTCGGCAACAACTGGGAGCCCATCGAGGACGAGTGCTACCGCGCCCTCGCCGACGCCATC CTCGACCGCCACCAGGAGACCGCAGCTGACCGCGGCTGCAGCGCGACAAGGCCAACGCCG GACGATGATCATCACCCCCTTACCCTCTGTGGTGCTTCGCGCGACGTGGATACTGAGACC GACGAACCTTGAACCAAGAAGCCTAGGGCCACCAACTCAGATCCTCAATCGCCTCCATCC CTTACGGACGACCAAGATGTTCCTGCAGCTATCTCACCCCCATCCCATGGTGCTTCTCCT CAATTCCGTCCACAGACCAGGGCCTCTGCACGACTGCGCCAAGCTTCTCCTTCTTCTGTT ACAGCAGCACACAAGAGGCCAAGACAGATGATGGATGAAGATTTCCAAGACTCTGCATTC CTCAGGGAACCCAAGCCTGAGCCCGATATCGATATGGACGCCATACAAGGCACTGCTGCT ACATCAGACTGCCCAAATGCCCACCTTGGCCTCATTGACTATCCGCTCAATGCCAGCTCC TCAAGGGTTGCACTTCCTCTGGCATTGCTTCCACCTGATCAAAATGTTCCACAGATTTCA GGTCCTAAAAAAAGGGCAATTCAACCTTGTAGCAAGGTGAACACGGGGGAAGGATCTTCA GTCATTGATGTAGCATCATCCACTATGGGTGAGGTCAAAATGTCACTGAAATGCAGTGTT GACCCAAAGTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)