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Oryza sativa
cluster # 7022 cluster # 7022       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7022#0 length = 876 sequences # 4  

consensusID : consensus_7022#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 876
fasta sequence
                              [AAAACAATAACAGGGCCAGTGTGCTTATCTAAAAT-ACACCTGAATCTTGCCAAATTAATGCCTATTTGTTTCTGATCCCTAGCTTTAAAGGCTGAAGCTGCTGTCAGCTGTGTTCGCGCAGCAGCAAGCACAGGCAGCATCATGGCGAAGGTGCACCGGCTGATGAACGCCGTGCTCCGGCTCGCCGCTGCGGCGGCTGCTGCAACGGCGGCGGTCGTCATGGTGACGAGCCGTGAGACCACCAGCTTCTTCGGCATTCAGATGGAGGCCAAGTACTCCTACACCCCATCTTTTATCTTCTTCGTGGTGGCGTATGCCGTGGCGGCCGCGTATAGCCTGCTCGTACTGGCCGTGCCGGCAGGGAGTGCCCTCTCCAGATTGGCGCTAACAACAGATGTGGTGTTGGGGATGGTGCTCGCCGGTGCCGTGGCCTCCGCCGGCGCCATATCGGACATCGCGAAGAACGGCAACTCGCACGCCGGGTGGCTGCCGGTGTGCGGGCAGATACACGCCTACTGCAACCACGTCATGGCGGCGCTCATCGCCGGCTTCGTCGCGCTGGCCGTCCACTTCGTCGTCGTCATGTACTCCCTCCACATTGTCACCGATGTCATTTGCCCCTGCCATTAGCAGAGTCTATCTATATATATAGTCCATAGTAGCAGTATATATATAGGTCGTGATATATACTTCCATCACCAAAAATTCGGGTACGTATATACCATTTTATTTTCTCTATATCTATGTCTCAATTTGTTAAAGTTATGTTTCAGATGGCAACTACATTGTGATCTATGGTCCTCTGTATCTTGTTGTTACTTGTTACACACAAGATTTGAATGAAAAATACCCCCACGATGTTCCAGAAACAAAAAA]

[+] EMBL CF291349             [AAAACAATAACAGGGCCAGTGTGCTTATCTAAAAT ACACCTGAATCTTGCCAAATTAATGCCTATTTGTTTCTGATCCCTAGCTTTAAAGGCTGAAGCTGCTGTCAGCTGTGTTCGCGCAGCAGCAAGCACAGGCAGCATCATGGCGAAGGTGCACCGGCTGATGAACGCCGTGCTCCGGCTCGCCGCTGCGGCGGCTGCTGCAACGGCGGCGGTCGTCATGGTGACGAGCCGTGAGACCACCAGCTTCTTCGGCATTCAGATGGAGGCCAAGTACTCCTACACCCCATCTTTTATCTTCTTCGTGGTGGCGTATGCCGTGGCGGCCGCGTATAGCCTGCTCGTACTGGCCGTGCCGGCAGGGAGTGCCCTCTCCAGATTGGCGCTAACAACAGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AB091471             [                               AAATCACACCTGAATCTTGCCAAATTAATGCCTATTTGTTTCTGATCCCTAGCTTTAAAGGCTGAAGCTGCTGTCAGCTGTGTTCGCGCAGCAGCAAGCACAGGCAGCATCATGGCGAAGGTGCACCGGCTGATGAACGCCGTGCTCCGGCTCGCCGCTGCGGCGGCTGCTGCAACGGCGGCGGTCGTCATGGTGACGAGCCGTGAGACCACCAGCTTCTTCGGCATTCAGATGGAGGCCAAGTACTCCTACACCCCATCTTTTATCTTCTTCGTGGTGGCGTATGCCGTGGCGGCCGCGTATAGCCTGCTCGTACTGGCCGTGCCGGCAGGGAGTGCCCTCTCCAGATTGGCGCTAACAACAGATGTGGTGTTGGGGATGGTGCTCGCCGGTGCCGTGGCCTCCGCCGGCGCCATATCGGACATCGCGAAGAACGGCAACTCGCACGCCGGGTGGCTGCCGGTGTGCGGGCAGATACACGCCTACTGCAACCACGTCATGGCGGCGCTCATCGCCGGCTTCGTCGCGCTGGCCGTCCACTTCGTCGTCGTCATGTACTCCCTCCACATTGTCACCGATGTCATTTGCCCCTGCCATTAGCAGAGTCTATCTATATATATAGTCCATAGTAGCAGTATATATATAGGTCGTGATATATACTTCCATCACCAAAAATTCGGGTACGTATATACCATTTTATTTTCTCTATATCTATGTCTCAATTTGTTAAAGTTATGTTTCAGATGGCAACTACATTGTGATCTATGGTCCTCTGTATCTTGTTGTTACTTGTTACACACAAGATTTGAATGAAAAATACCCCCACGATGTTCCAGAAACAAAAAA]
[-] EMBL CF291348             [                                                                                                                                                                                                                                                                                                                             CCGTGGCGGCCGCGTATAGCCTGCTCGTACTGGCCGTGCCGGCAGGGAGTGCCCTCTCCAGATTGGCGCTAACAACAGATGTGGTGTTGGGGATGGTGCTCGCCGGTGCCGTGGCCTCCGCCGGCGCCATATCGGACATCGNGAAGAACGGCAACTCGCACGCCGGGTGGCTGCCGGTGTGCGGGCAGATACACGCCTACTGCAACCACGTCATGGCGGCGCTCATCGCCGGCTTCGTCGCGCTGGCCGTCCACTTCGTCGTCGTCATGTACTCCCTCCACATTGTCACCGATGTCATTTGCCCCTGCCATTAGCAGAGTCTATCTATATATATAGTCCATAGTAGCAGTATATATATAGGTCGTGATATATACTTCCATCACCAAAAATTCGGGTACGTATATACCATTTTATTTTCTCTATATCTATGTCTCAATTTGTTAAAGTTATGTTTCAGATGGCAACTACATTGTGATCTATGGTCCTCTGTATCTTGTTGTTACTTGTTACACACAAGATTTGAATGAAAAATACCCCCACCATGTTCCAGAAAAAAA   ]
[+] EMBL AU070961             [                                                                                                                                                                                                                                                                                                                                             TAGCCTGCTCGTACTGGCCGTGCCGGCAGGGAGTGCCCTCTCCAGATTGGCGCTAACAACAGATGTGGTGTTGGGGATGGTGCTCGCCGGTGCCGTGGCCTCCGCCGGCGCCATATCGGACATCGCGAAGAACGGCAACTCGCACGCCGGGTGGCTGCCGGTGTGCGGGCAGATACACGCCTACTGCAACCACGTCATGGCGGCGCTCATCGCCGGCTTCGTCGCGCTGGCCGTCCACTTCGTCGTCGTCATGTACTCCCTCCACATTGTCACCGATGTCATTTGCCCCTGCCATTAGCAGAGTCTATCTATATATATAGTCCATAGTAGCAGTATATATATAGGTCGTGATATATACTTCCATCACCAAAAATTCGGGTACGTATA                                                                                                                                                             ]


>consensus_7022#0 AAAACAATAACAGGGCCAGTGTGCTTATCTAAAATACACCTGAATCTTGCCAAATTAATG CCTATTTGTTTCTGATCCCTAGCTTTAAAGGCTGAAGCTGCTGTCAGCTGTGTTCGCGCA GCAGCAAGCACAGGCAGCATCATGGCGAAGGTGCACCGGCTGATGAACGCCGTGCTCCGG CTCGCCGCTGCGGCGGCTGCTGCAACGGCGGCGGTCGTCATGGTGACGAGCCGTGAGACC ACCAGCTTCTTCGGCATTCAGATGGAGGCCAAGTACTCCTACACCCCATCTTTTATCTTC TTCGTGGTGGCGTATGCCGTGGCGGCCGCGTATAGCCTGCTCGTACTGGCCGTGCCGGCA GGGAGTGCCCTCTCCAGATTGGCGCTAACAACAGATGTGGTGTTGGGGATGGTGCTCGCC GGTGCCGTGGCCTCCGCCGGCGCCATATCGGACATCGCGAAGAACGGCAACTCGCACGCC GGGTGGCTGCCGGTGTGCGGGCAGATACACGCCTACTGCAACCACGTCATGGCGGCGCTC ATCGCCGGCTTCGTCGCGCTGGCCGTCCACTTCGTCGTCGTCATGTACTCCCTCCACATT GTCACCGATGTCATTTGCCCCTGCCATTAGCAGAGTCTATCTATATATATAGTCCATAGT AGCAGTATATATATAGGTCGTGATATATACTTCCATCACCAAAAATTCGGGTACGTATAT ACCATTTTATTTTCTCTATATCTATGTCTCAATTTGTTAAAGTTATGTTTCAGATGGCAA CTACATTGTGATCTATGGTCCTCTGTATCTTGTTGTTACTTGTTACACACAAGATTTGAA TGAAAAATACCCCCACGATGTTCCAGAAACAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)