These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7068#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2610 fasta sequence [AAACGATCTGGTTGCCTTCTCCGGTTCTCCCCAAGCAAACACGGACTAGGGCCTGCGCCGCGGCGGCGGCGGCGGCGGCGCTGCTTTTCCCCGGCGCGCCCCGTCCCCGGCAGCGGCTCCTCCGGCGTGGTACCTCCCAAGCGCTTCCGATCCTCGACATGACACTGGCACCAACCGGTCTCCATGACGGCGACATCCAACGCCGCCGCCGGCGCGGCCACGCTGATGCCGCTGCTGATCCACCTCCTTCGCGGCGCCTCCGACCTCGCCTCCGTGTCCGCCACCCACGCCAAGCTCCTCAAGCTCGGGGCGGCCTCCTCGGTCGCCTCCTCCAACCACCTCCTCGCGGCGTACGGCCGCTGCGGCTGCACCGCCCTCGCGCGCCACCTGTTCGACGGAATGCGCGACCGGAACGTCGTCTCCTGGACGGCCCTCATGTCCGGGTACGCCAGCGCCGGCCGGCCCCGGGCGGCCGTCGCCCTCCTCCGCGCCATGGCACGCAGCGGCGTGCCACCCAACGCCTTCACCTTCTCTACAGCTGCCAGCTCGTGCGCGCGCCTGGCTGACGCCGGCCTTGGGCGGCAGGTGCATGCCCGCGCTGAGGTCGCGGGGTACGCGTGCGACAGCGTCGTTTCCACTGCGCTCGTCGACATGTACGGCAAGGCCGGCAGGGTCGGGGACGCCCGCGCTGTGTTCGACGCAATGCCCGTGACGGCGAGAAACGCGGTTTCCTGGGCCTCGATGCTGTCGGTGTATGCGCAGAACGCGCTCGGGCATGACGCTATCCAGCTCTTCGCCGAGCTCAGAACCAATGGCGAAGACATGGCGCCCAACCACTTCATGCTGTCAAGCGTGGTGAACGCGTGCGCGGGCGTCGGGCGGCTTGGCATCGGCAAGTGCATTCACGGCATGGTCCTCCACCATGGGCACGAAGACAATGACGTGGTTGCAGTGGCTCTGGTTGACATGTACTCCAAATGTGGCATCTACGAGTACTCAAAGAAGGTGTTCGACAGGATCAACCAGCCGTCGGTCATCCCCTACACCTCCATCATCGTGGCGACGGCGAAGTACGGCCTCGGCAGGTGCGCACTCGCTTTGTTCAGTGACATGGTTGGCCGAGGCGTGCAGCCAAACAGTGTCACACTGCTCGGCGTCCTGCACGCTTGCAGCCACTCAGGTCTGGTCGACACCGGCCTCCAGCTCCTCCGTTCAATGCGAAGCGAGTACGGCATTGATCCATGTGCCAGCCACTACACTTGTGCTGTCGACATGCTCGGTCGTGCAGGTCAGCTCGAGGCGGCATTCGAGCTGGCCGACGAAGCACAGGTCAATGGCAATGACGCCCTCATGCTGTGGAGCTCATTGCTGTCAGCTTGCCGGAACCACAAGCGCCTGGACCTAGCAACCATGGCTGGGCAGAAGGTATCAGAGTTCACCCAAGATGTGGCCGGCGCACTGGTGGTCATGTCGAACGCATACGCTTCAGCCGGTCAAGCCGACGACGCTGCTGCGGTGTGGTCGAACATGAGGCGGCGCGGCATTCGGAAGGATCCCGGGTGCAGCTGGATCGAGATAAAGGACATCTCCTACGTGTTCTACGCTGGCATGGTATCGCCTGCCGGCTCAAGGGCCGGTGAGGTGATGCTGCTGTTAGATGAATTGGAGGGCAAGATGAGGGAGAAGGGTTACAAGGGGAGAATTGGCAGTGCCAGAGTCCTTGATGCTGATGAAGAAGAGGATGGAAATCATCATCATCAGGAAGGCAGAGGTGTGATGGTTGGAGTGCACAGTGAGTTGCTGGCATTGGGGCTTGGATTGCTGGTGATCCCCAAGGGGATGGCCATTAGGGTGATGAAGAACCTGAGGATGTGCCGTGACTGCCATGAAGCGTTTAAGGTCATCAGTGCCATTGTGGAGAGGGAGTTCGTTGTCAGGGATCTCAACAGGTTCCACCACTTCAGGATGGGGTCATGTTCTTGCAATGACTACTGGTGATTCAATCAAAGGCTAGAATCAGTTACTCCCATCTTGCAATGATTACTGGTGATTCAATCAAAGGCTAGAATCAGTTACTCCCACAGTCCTAAAATATAAGAACCTAAAAC--CGGATGTGACATTTCCTAGTATAATGAATCTTAAGAGGCACTAAAAAATGTCTCATTCAATTCTAGGTTCTTCTATTTTGGGACGGATGGAGTAGTAGGAAGAAACCAGGTCATGTTCTTGCAATGACTACTGGTGATGCAATCAAAGGCTAAATCGGTTGGTAGTTGTGATCTTTTTGACATAAAAGGAAGACAGCCTTGACAGAATTTCTTTGTGTAGATGCAGAACTGAAGTGACTTCTTTCGTTGCGAGCCTGTAGGTAGGTACCAAAGGTCCACAGCATTGCTTGAAAATATAGACACAAACGAACATGGCCTGGGGTTGGAGTTGGCCCCAACTTTGTTGAAACTGGGTTTGTTTTATGATATGTCTTTGTGCTCTAGTAATAAATATTTGATATTTATGATAAAGTTTGATCAAACTCTTAAATTTTGATTATCAATAATTTCTCAAGTGATAGTTTTTAATAACATGTACATAGAGTACTATCATAAATATCAT] [+] EMBL AK067553 [AAACGATCTGGTTGCCTTCTCCGGTTCTCCCCAAGCAAACACGGACTAGGGCCTGCGCCGCGGCGGCGGCGGCGGCGGCGCTGCTTTTCCCCGGCGCGCCCCGTCCCCGGCAGCGGCTCCTCCGGCGTGGTACCTCCCAAGCGCTTCCGATCCTCGACATGACACTGGCACCAACCGGTCTCCATGACGGCGACATCCAACGCCGCCGCCGGCGCGGCCACGCTGATGCCGCTGCTGATCCACCTCCTTCGCGGCGCCTCCGACCTCGCCTCCGTGTCCGCCACCCACGCCAAGCTCCTCAAGCTCGGGGCGGCCTCCTCGGTCGCCTCCTCCAACCACCTCCTCGCGGCGTACGGCCGCTGCGGCTGCACCGCCCTCGCGCGCCACCTGTTCGACGGAATGCGCGACCGGAACGTCGTCTCCTGGACGGCCCTCATGTCCGGGTACGCCAGCGCCGGCCGGCCCCGGGCGGCCGTCGCCCTCCTCCGCGCCATGGCACGCAGCGGCGTGCCACCCAACGCCTTCACCTTCTCTACAGCTGCCAGCTCGTGCGCGCGCCTGGCTGACGCCGGCCTTGGGCGGCAGGTGCATGCCCGCGCTGAGGTCGCGGGGTACGCGTGCGACAGCGTCGTTTCCACTGCGCTCGTCGACATGTACGGCAAGGCCGGCAGGGTCGGGGACGCCCGCGCTGTGTTCGACGCAATGCCCGTGACGGCGAGAAACGCGGTTTCCTGGGCCTCGATGCTGTCGGTGTATGCGCAGAACGCGCTCGGGCATGACGCTATCCAGCTCTTCGCCGAGCTCAGAACCAATGGCGAAGACATGGCGCCCAACCACTTCATGCTGTCAAGCGTGGTGAACGCGTGCGCGGGCGTCGGGCGGCTTGGCATCGGCAAGTGCATTCACGGCATGGTCCTCCACCATGGGCACGAAGACAATGACGTGGTTGCAGTGGCTCTGGTTGACATGTACTCCAAATGTGGCATCTACGAGTACTCAAAGAAGGTGTTCGACAGGATCAACCAGCCGTCGGTCATCCCCTACACCTCCATCATCGTGGCGACGGCGAAGTACGGCCTCGGCAGGTGCGCACTCGCTTTGTTCAGTGACATGGTTGGCCGAGGCGTGCAGCCAAACAGTGTCACACTGCTCGGCGTCCTGCACGCTTGCAGCCACTCAGGTCTGGTCGACACCGGCCTCCAGCTCCTCCGTTCAATGCGAAGCGAGTACGGCATTGATCCATGTGCCAGCCACTACACTTGTGCTGTCGACATGCTCGGTCGTGCAGGTCAGCTCGAGGCGGCATTCGAGCTGGCCGACGAAGCACAGGTCAATGGCAATGACGCCCTCATGCTGTGGAGCTCATTGCTGTCAGCTTGCCGGAACCACAAGCGCCTGGACCTAGCAACCATGGCTGGGCAGAAGGTATCAGAGTTCACCCAAGATGTGGCCGGCGCACTGGTGGTCATGTCGAACGCATACGCTTCAGCCGGTCAAGCCGACGACGCTGCTGCGGTGTGGTCGAACATGAGGCGGCGCGGCATTCGGAAGGATCCCGGGTGCAGCTGGATCGAGATAAAGGACATCTCCTACGTGTTCTACGCTGGCATGGTATCGCCTGCCGGCTCAAGGGCCGGTGAGGTGATGCTGCTGTTAGATGAATTGGAGGGCAAGATGAGGGAGAAGGGTTACAAGGGGAGAATTGGCAGTGCCAGAGTCCTTGATGCTGATGAAGAAGAGGATGGAAATCATCATCATCAGGAAGGCAGAGGTGTGATGGTTGGAGTGCACAGTGAGTTGCTGGCATTGGGGCTTGGATTGCTGGTGATCCCCAAGGGGATGGCCATTAGGGTGATGAAGAACCTGAGGATGTGCCGTGACTGCCATGAAGCGTTTAAGGTCATCAGTGCCATTGTGGAGAGGGAGTTCGTTGTCAGGGATCTCAACAGGTTCCACCACTTCAGGATGGGGTCATGTTCTTGCAATGACTACTGGTGATTCAATCAAAGGCTAGAATCAGTTACTCCCATCTTGCAATGATTACTGGTGATTCAATCAAAGGCTAGAATCAGTTACTCCCACAGTCCTAAAATATAAGAACCTAAAAC CGGATGTGACATTTCCTAGTATAATGAATCTTAAGAGGCACTAAAAAATGTCTCATTCAATTCTAGGTTCTTCTATTTTGGGACGGATGGAGTAGTAGGAAGAAACCAGGTCATGTTCTTGCAATGACTACTGGTGATGCAATCAAAGGCTAAATCGGTTGGTAGTTGTGATCTTTTTGACATAAAAGGAAGACAGCCTTGACAGAATTTCTTTGTGTAGATGCAGAACTGAAGTGACTTCTTTCGTTGCGAGCCTGTAGGTAGGTACCAAAGGTCCACAGCATTGCTTGAAAATATAGACACAAACGAACATGGCCTGGGGTTGGAGTTGGCCCCAACTTTGTTGAAACTGGGTTTGTTTTATGATATGTCTTTGTGCTCTAGTAATAAATATTTGATATTTATGATAAAGTTTGATCAAACTCTTAAATTTTGATTATCAATAATTTCTCAAGTGATAGTTTTTAATAACATGTACATAGAGTACTATCATAAATATCAT] [+] EMBL AU078747 [ GGCAATGACGCCCTCATGCTGTGGAGCTCATTGCTGTCAGCTTGCCGGAACCACAAGCGCCTGGACCTAGCAACCATGGCTGGGCAGAAGGTATCAGAGTTCACCCAAGATGTGGCCGGCGCACTGGTGGTCATGTCGAACGCATACGCTTCAGCCGGTCAAGCCGACGACGCTGCTGCGGTGTGGTCGAACATGAGGCGGCGCGGCATTCGGAAGGATCCCGGGTGCAGCTGGATCGAGATAAAGGACATCTCCTACGTGTTCTACGCTGGCATGGTATCGCCTGCCGGCTCAAGGGCCGGTGAGGTGATGCTGCTGTTAGATGAATTGGAGGGCAAGATGAGGGAGAAGGGTTACAAGGGGAGAATTGG ] [+] EMBL CA765537 [ CAGTGCCAGAGTCCTTGATGCTGATGAAGAAGAGGATGGAAATCATCATCATCAGGAAGGCAGAGGTGTGATGGTTGGAGTGCACAGTGAGTTGCTGGCATTGGGGCTTGGATTGCTGGTGATCCCCAAGGGGATGGCCATTAGGGTGATGAAGAACCTGAGGATGTGCCGTGACTGCCTTGAAGCGTTTAAGGTCATCAGTGCCATTGTGGAGAGGGAGTTCGTTGTCAGGGATCTCAACAGGTTCCACCACTTCAGGATGGGGTCATGTTCTTGCAATGACTACTGGTGATTCAATCAAAGGCTAGAATCAGTTACTCCCATCTTGCAATGATTACTGGTGATTCAATCAAAGGCTAGAATCAGTTACTCCCACAGTCCTAAAATATAAGAACCTAAAACCGCGGATGTGACATTTCCTAGGACAATGAATCTTAAGAGGCACTAAAAAATGTCTCATTCGATTCTAGGTTCTTCTATTTTGGGACGGATGGAGTAGTAGGAAGAAACCAGGTCATGTTCTTGCAATGACTACTGGTGATGCAATCAAAGGCTAAATCGGTTGGTAGTTGTGATCTTTTTGACATAAAAGGAAGACA ] [+] EMBL AU078748 [ TGGGGCTTGGATTGCTGGTGATCCCCCAAGGGATGGCCATTAGGGTGATGAAGAACCTGAGGATGTGCCGTGACTGCCATGAAGCGTTTAAGGTCATCAGTGCCATTGTGGAGAGGGAGTTCGTTGTCAGGGATCTCAACAGGTTCCACCACTTCAGGATGGGGTCATGTTCTTGCAATGACTACTGGTGATTCAATCAAAGGCTAGAATCAGTTACTCCCATCTTGCAATGATTACTGGTGATTCAATCAAAGGCTAGAATCAGTTACTCCCACAGTCCTAAAATATAAGAACCTAAAAC CGGATGTGACATTTCCTAGTATAATGAATCTTAAGAGGCACTAAAAAATGTCTCATTCAATTCTAGGTTCTTCTATTTTGGGACGGATGGAGTAGTAGGAAGAAACCAGGTCATGTTCTTGCAATGACTACTGGTGATGCAATCAAAGGCTAAATCGGTTGGTAGTTGTGATCTTTTTGACATAAAAGGAAGACAGCCTTGACAGAATTTCTTTGTGTAGATGCAGAACTGAAGTGACTTCTTTCGTTGCGAGCCTGTAGGTAGGTACCAAAGGTCCACAGCATTGCTTGAAAATATAGACACAAACGAACATGGCCTGGGGTTGGAGTTGGCCCCAACTTTGTTGAAACTGGGTTTGTTTTATnaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||