cluster # 7079

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Oryza sativa
cluster # 7079 cluster # 7079 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7079#0 length = 690 sequences # 4

consensusID : consensus_7079#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 690
fasta sequence

                              [TTTTTTTTTAGCTAGAACATACTTGGCTGTGGCTTATTTATTTCACAAGCGTTGCTGATACAGTGATACACATGTACAAGAAGTAAACAAGATCATCATGTAGGCTTTGCAGGCTCATTTTACAAGATCGACTACACCTTAGCTGCGTGGTGCTCTTCTCCAGATTCATTTTTACAGGTGGCCGGA-TTCAGCTGC-GAGCCACGG-CGAGGGTCGCCGGGCCGG-CGAGCCGGCGACGTCGACGACGGCCGGTGCCTCGCCGGAGAGAGGCCGCCGTGATTCCTCCTCGGGTGTTCGTTGCTTCGTCTTCTTTACAGGCGGCGAGAGATCAAGAGCATCTGTTCACTCAAGACGCCGCTGTGATGGAAGGAGGCTGAGCTGCCCCCATGAACGGCGGCGGCGGCTGCTCGCCGCCGTGGT-CGTCATCGTCTTCCTCGGCGTCCCAGAGGAAGCCGGCGTAGGAGCCGAGGACGTAGCAG-TCGTCGGGGGCGGCGTGGACGGCGCGGGTGAAGTAGGCGTCGGCGCGGTCGGCGTCGCGGGTGGTCTCCCAGACG-AGGCCCGCGTAGAGCGCGAGGGCGTCG-CCGTCGCCGGGG-TTGGCGACGATGGCGCGCTCGCAATACTTCCTGCGCCCTCGCGGGGTCTCGATTTTTTTTTTTTTTTTTTAGGTTCAAATCCAACTTATTCATAAAGCAT]

[-] EMBL AU071153             [TTTTTTTTTAGCTAGAACATACTTGGCTGTGGCTTATTTATTTCACAAGCGTTGCTGATACAGTGATACACATGTACAAGAAGTAAACAAGATCATCATGTAGGCTTTGCAGGCTCATTTTACAAGATCGACTACACCTTAGCTGCGTGGTGCTCTTCTCCAGATTCATTTTTACAGGTGGCCGGA TTCAGCTGC GAGCCACGG CGAGGGTCGCCGGGCCGG CGAGCCGGCGACGTCGACGACGGCCGGTGCCTCGCCGGAGAGAGGCCGCCGTGATTCCTCCTCGGGTGTTCGTTGCTTCGTCTTCTTTACAGGCGGCGAGAGATCAAGAGCATCTGTTCACTCAAGACGCCGCTGTGATGGAAGGAGGCTGAGCTGCCCCCATGAACGGCGGCGGCGGCTGCTCGCCG CGTGGTCCGTCATCGTCTTCCTCGGNGTCCCAGAGGAAGCCGGCGTAGGAGCCGAGGACGTAGCAGTTCGTCGGGGGCGGCGTGGACGGCGCGGGTGAA TAGGCGTCGGCGCGGTCGGCGTCGCGGGTGGTCTCCCAGACGAAGGCCCGCGTAAAACGCGANGGCGTCGCCCGTCGCCGGGGTTTGCCGAAGATGGCGCGCTCGCAATACTTCCTGCGCCCTCGCGGG                                                       ]
[+] EMBL CB627040             [                  ATACTTGGCTGTGGCTTATTTATTTCACAAGCGTTGCTGATACAGTGATACACATGTACAAGAAGTAAACAAGATCATCATGTAGGCTTTGCA ACTCATTTTACAAGATCGACTACACCTTAGCTGCGTGGTGCTCTTCTCCAGATTCATTTTTACAGGTGGCCGGA TTCAGCTGC GAGCCACGG CGAGGGTCGCCGGGCCGG CGAGCCGGCGACGTCGACGACGGCCGGTGCCTCGCCGGAGAGAGGCCGCCGTGATTCCTCCTCGGGTGTTCGTTGCTTCGTCTTCTTTACAGGCGGCGAGAGATCAAGAGCATCTGTTCACTCAAGACGCCGCTGTGATGGAAGGAGGCTGAGCTGCCCCCATGAACGGCGGCGGCGGCTGCTCGCCGCCGTGGT CGTCATCGTCTTCCTCGGCGTCCCAGAGGAAGCCGGCGTAGGAGCCGAGGACGTAGCAG TCGTCGGGGGCGGCGTGGACGGCGCGGGTGAAGTAGGCGTCGGCGCGGTCGGCGTCGCGGGTGGTCTCCCAGACG AGGCCCGCGTAGAGCGCGAGGGCGTCG CCGTCGCCGGGG TTGGCGACGATGGCGCGCTCGCAGTAC TCCTGCGCCCTCGCCGCGTCTCGATTTTTTTTTTTTTTTTTTAGGTTCAAATCCAACTTATTCATAAAGCAT]
[-] EMBL C73846               [                                                                                                                                                                                     cgGGATTTNAACTTCAAANCAACGGCCAAGGGTCCCGGGGCCGGCCAAGCCGGCGACGTCGACGACGGCCGTTGCCTCGCCGGAGAGAGGCCGCCGTGATTCCTCCTCGGGTGTTCGTTGCTTCGTCTTCTTTACAGGCGGCGAGAGATCAAGAGCATCTGTTCACTCAAGACGCCGCTGTGATGGAAGGAGGCTGAGCTGCCCCCATGAACGGCGGC GCGGCTGCTCGCCGCCGTGGT CGTCATCGTCTTCCTCGGCGTCCCAGAGGAAGCCGGCGTAGGAGCCGAGGACGTAGCtgcaggag                                                                                                                                                                                                                    ]
[-] EMBL OSC26721             [                                                                                                                                                                                                                                                                                                           TGCTTCGTCTTCTTTACAGANGACGAGAGATCAAGAGCATCTGTTAACTCAAGACGCCGCTGTGATGGAAGGAGGCTGAGCTGCCCCCATGAACGGC GNNANGGCTGCTCGCCGCCNTGGT CGTCATCGTCTTCCTCGGCGTCCCAGAGGAAGCCAGCGTAGGAGCCGAGGACGTAGCAG TCGTCGGGGGCGGCGTGGACGGCGCGGGTGAAGTAGGCGTCGGCGCGGTCGGCGTCGCGGGTGGTCTCCCAGACG AGGCCCGCGTAGAGCGCGAGGGCGTCG CCGTCGTCGGGG TTGGCGACGATGGCGCGCTC                                                                                ]




>consensus_7079#0
TTTTTTTTTAGCTAGAACATACTTGGCTGTGGCTTATTTATTTCACAAGCGTTGCTGATA
CAGTGATACACATGTACAAGAAGTAAACAAGATCATCATGTAGGCTTTGCAGGCTCATTT
TACAAGATCGACTACACCTTAGCTGCGTGGTGCTCTTCTCCAGATTCATTTTTACAGGTG
GCCGGATTCAGCTGCGAGCCACGGCGAGGGTCGCCGGGCCGGCGAGCCGGCGACGTCGAC
GACGGCCGGTGCCTCGCCGGAGAGAGGCCGCCGTGATTCCTCCTCGGGTGTTCGTTGCTT
CGTCTTCTTTACAGGCGGCGAGAGATCAAGAGCATCTGTTCACTCAAGACGCCGCTGTGA
TGGAAGGAGGCTGAGCTGCCCCCATGAACGGCGGCGGCGGCTGCTCGCCGCCGTGGTCGT
CATCGTCTTCCTCGGCGTCCCAGAGGAAGCCGGCGTAGGAGCCGAGGACGTAGCAGTCGT
CGGGGGCGGCGTGGACGGCGCGGGTGAAGTAGGCGTCGGCGCGGTCGGCGTCGCGGGTGG
TCTCCCAGACGAGGCCCGCGTAGAGCGCGAGGGCGTCGCCGTCGCCGGGGTTGGCGACGA
TGGCGCGCTCGCAATACTTCCTGCGCCCTCGCGGGGTCTCGATTTTTTTTTTTTTTTTTT
AGGTTCAAATCCAACTTATTCATAAAGCAT

clustalw multiple alignements is not computed in this case