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Oryza sativa
cluster # 7080 cluster # 7080       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7080#0 length = 2076 sequences # 3  
consensus_7080#1 length = 2046 sequences # 1  

consensusID : consensus_7080#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2076
fasta sequence
                              [ATCAGAAAATCCATGAAGATAATTGAGCTTGGTTCTAACAGCTAATAGCTGATCAGACCACCATGGTGGCCTCTCTCCTTTGCACCGTCGCCGTTGCGGTTCTCGCCGTGGCAGCGGTCGGCGGCGAGGCGGGGGTGGTGGAGCACACCTTCGTGGTGCACGAGATGAACGTGACGCACTTGTGCAACACGACCAAGATCTTTGTGGTGAATGGGCAGTTACCGGGCCCGACGGTGGACGTGACAGAGGGTGACACAGTGGTCATCCACGTCGTCAACAAAATACCACATGGGCTTACCATCCACTGGCACGGTGTTCGCCAATTGAGGAGC-TGCTGGGCCGATGGGGCAGGCTTCATCACCGAGTGCCCCATCCCGCCTGGCAGTGAGCGCACCTACCGCTTCAATGTTACCGACCAAGTCGGCACGCTGTGGTGGCACGCCCACGTCACCTGCCTCCGCTCCACCATCAACGGCGCATTCATCATCCGTCCCCGCGATGGGAAGTACCCCTTCCCGACACCCGTCAAGGATGTACCGATCATCATAGGTGAATGGTGGGAGCTCGACCTCGTTGAGCTGGACAGGAGGATGAGGGATGGCAACTTCGACGACAACCCGTTGTCGGCTACGATAAACGGGAAGCTTGGCGACCTTAGCAACTGCTCCGGCATAGTGGAGGAGAGCTTTGTTCTCAACGTGAAGCATGGGGAGAGCTACCTTCTCCGGGTCATCAACACTGCATTCTTCTCCGAATACTATTTCAAGGTCGCCGGCCACACGTTCACGGTGGTTGGCGCTGATGGCAACTACCTGACGCCGTTCAAGACAGACATGGTCACCGTTGCCCCCGGCGAGGCCATTGACGTGCTCATGGTCGCCGACGCCCCACCAGCCCACTATCACATGATCGCGTTGGCTAACCAACCACCGGAGCCAGACCCACAGATCCCGAAGTACATCTCTCGTGGCCTCGTCCGCTACACCGGTGTCGATGCCAACAACAATGGCCTACCGGTCCCAATGCCGATCATGCCTAACCAACACAACACCATGCCATCCTACTACTTCCATGCCAATCTTACTGGCCTCATGCATCCGAAGCATCGTCGTGTGCCCATGCACGTCGACGAGCGTATCTTCATCATCCTTGGGCTTGGTACCATCTGTCGTGGTCGGAACACCACCTGCAAGCGGCAGCGCAGCCTGGAGACCATCGAGGTGGCCACCATGAACAATGTCTCCTTCACCCACCCAAACACCACTGCGCTCCTCGAGCGCTACTACGACGGCACTCCAGAAGGCGTTTACACGGAGGACTTCCCCGTTCGGCCACCACGGCCATACAACTACACCAACCCTGCTCTCATCCCTCCTGGCCCTCTCGAAGAGGTGCTGGAGCCAACATTCAAGGCGACCAAGCTGAAACGGTTCAAGTATAACACATCAGTGGAGATCATCTTCCAAAGCAGCACGTTGTTGATGAGTGACTCCAACCCCATGCACCTCCATGGCTATGACGTCTTCCTCCTTGCGCAGGGGCTTGGCAGCTTCAACGCCAAGAGGGACATCAGGAAGTTCAACTACCACAACCCTCAGCTCAGGAACACCATATTGGTTCCCCGCGGTGGTTGGGCCGCCGTCCGCTTCATCACAGACAATCCAGGGATGTGGTACTTGCACTGTCACTTTGAGTTCCACATCATTATGGGCATGGCGACGGCGTTCATCGTGGAGGATGGGCCAACACCGGAGACGAGCCTGCCTCCACCGCCGCCGGAGTTCAAGAGATGTGATGCCTCTTGAAGCAACTTATCCTAACAACTATGGCAAGGACCTTCCTCCTCTTTGCCAGTATTCACTAGATAATGGCATTGCCTTTGGGGCATTTTATTCTTGTATTGCATTAGTTAAGACGTACATGTTAAATTCCAGCGTGCACAAGCCGGTCCAGGCCATGTGGTCATCAGCTTCAGGCCAAGGTCACGAAAAGCACAACTTGATCATCTGCATCTTGTTATGTACTCCCTCCGTTTTTTGTTTGATTTTTTTTTCTTGTCAAACTTCTTTAATTTAA]

[+] EMBL AK066963             [ATCAGAAAATCCATGAAGATAATTGAGCTTGGTTCTAACAGCTAATAGCTGATCAGACCACCATGGTGGCCTCTCTCCTTTGCACCGTCGCCGTTGCGGTTCTCGCCGTGGCAGCGGTCGGCGGCGAGGCGGGGGTGGTGGAGCACACCTTCGTGGTGCACGAGATGAACGTGACGCACTTGTGCAACACGACCAAGATCTTTGTGGTGAATGGGCAGTTACCGGGCCCGACGGTGGACGTGACAGAGGGTGACACAGTGGTCATCCACGTCGTCAACAAAATACCACATGGGCTTACCATCCACTGGCACGGTGTTCGCCAATTGAGGAGC TGCTGGGCCGATGGGGCAGGCTTCATCACCGAGTGCCCCATCCCGCCTGGCAGTGAGCGCACCTACCGCTTCAATGTTACCGACCAAGTCGGCACGCTGTGGTGGCACGCCCACGTCACCTGCCTCCGCTCCACCATCAACGGCGCATTCATCATCCGTCCCCGCGATGGGAAGTACCCCTTCCCGACACCCGTCAAGGATGTACCGATCATCATAGGTGAATGGTGGGAGCTCGACCTCGTTGAGCTGGACAGGAGGATGAGGGATGGCAACTTCGACGACAACCCGTTGTCGGCTACGATAAACGGGAAGCTTGGCGACCTTAGCAACTGCTCCGGCATAGTGGAGGAGAGCTTTGTTCTCAACGTGAAGCATGGGGAGAGCTACCTTCTCCGGGTCATCAACACTGCATTCTTCTCCGAATACTATTTCAAGGTCGCCGGCCACACGTTCACGGTGGTTGGCGCTGATGGCAACTACCTGACGCCGTTCAAGACAGACATGGTCACCGTTGCCCCCGGCGAGGCCATTGACGTGCTCATGGTCGCCGACGCCCCACCAGCCCACTATCACATGATCGCGTTGGCTAACCAACCACCGGAGCCAGACCCACAGATCCCGAAGTACATCTCTCGTGGCCTCGTCCGCTACACCGGTGTCGATGCCAACAACAATGGCCTACCGGTCCCAATGCCGATCATGCCTAACCAACACAACACCATGCCATCCTACTACTTCCATGCCAATCTTACTGGCCTCATGCATCCGAAGCATCGTCGTGTGCCCATGCACGTCGACGAGCGTATCTTCATCATCCTTGGGCTTGGTACCATCTGTCGTGGTCGGAACACCACCTGCAAGCGGCAGCGCAGCCTGGAGACCATCGAGGTGGCCACCATGAACAATGTCTCCTTCACCCACCCAAACACCACTGCGCTCCTCGAGCGCTACTACGACGGCACTCCAGAAGGCGTTTACACGGAGGACTTCCCCGTTCGGCCACCACGGCCATACAACTACACCAACCCTGCTCTCATCCCTCCTGGCCCTCTCGAAGAGGTGCTGGAGCCAACATTCAAGGCGACCAAGCTGAAACGGTTCAAGTATAACACATCAGTGGAGATCATCTTCCAAAGCAGCACGTTGTTGATGAGTGACTCCAACCCCATGCACCTCCATGGCTATGACGTCTTCCTCCTTGCGCAGGGGCTTGGCAGCTTCAACGCCAAGAGGGACATCAGGAAGTTCAACTACCACAACCCTCAGCTCAGGAACACCATATTGGTTCCCCGCGGTGGTTGGGCCGCCGTCCGCTTCATCACAGACAATCCAGGGATGTGGTACTTGCACTGTCACTTTGAGTTCCACATCATTATGGGCATGGCGACGGCGTTCATCGTGGAGGATGGGCCAACACCGGAGACGAGCCTGCCTCCACCGCCGCCGGAGTTCAAGAGATGTGATGCCTCTTGAAGCAACTTATCCTAACAACTATGGCAAGGACCTTCCTCCTCTTTGCCAGTATTCACTAGATAATGGCATTGCCTTTGGGGCATTTTATTCTTGTATTGCATTAGTTAAGACGTACATGTTAAATTCCAGCGTGCACAAGCCGGTCCAGGCCATGTGGTCATCAGCTTCAGGCCAAGGTCACGAAAAGCACAACTTGATCATCTGCATCTTGTTATGTACTCCCTCCGTTTTTTGTTTGATTTTTTTTTCTTGTCAAACTTCTTTAATTTAA]
[+] EMBL OSS11803A            [       AATCCATGAAGATAATTGAGCTTGGTTCTAACAGCTAATAGCTGATCAGACCACCATGGTGGCCTCTCTCCTTTGCACCGTCGCCGTTGCGGTTCTCGCCGTGGCAGCGGTCGGCGGCGAGGCGGGGGTGGTGGAGCACACCTTCGTGGTGCACGAGATGAACGTGACGCACTTGTGCAACACGACCAAGATCTTTGTGGTGAATGGGCAGTTACCGGGCCCGACGGTGGACGTGACAGAGGGTGACACAGTGGTCATCCACGTCGTCAACAAAATACCACATGGGCTTACCATCCACTGGCACGGTGTTCGNCAATTGAGGAGCTTGCTGGGCCGATGGGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU095975             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACATTCAAGGCGACCAAGCTGAAACGGTTCAAGTATAACACATCAGTGGAGATCATCTTCCAAAGCAGCACGTTGTTGATGAGTGACTCCAACCCCATGCACCTCCATGGCTATGACGTCTTCCTCCTTGCGCAGGGGCTTGGCAGCTTCAACGCCAAGAGGGACATCAGGAAGTTCAACTACCACAACCCTCAGCTCAGGAACACCATATTGGTTCCCCGCGGTGGTTGGGCCGCCGTCCGCTTCATCACAGACAATCCAGGGATGTGGTACTTGCACTGTCACTTTGAGTTCCACATCATTATGGGCATGGCGACGGCGTTCATCGTGGAGGATGGGCCAACACCGGAGACGAGCCTGCCTCCACCGCCGCCGGAGTTCAAGAGATGTGATGCCTCTTGAAACAACTTATCCTAACAACTATGGCAAGGACCTTCCTCCTNTTTGCCAGTATTCACTAGATAATGGCATTGCCTTTGGGGCATTTTATTCTTGTATTGCATTAGTTAAGACGTACATGTTAAATTCCAGCGTGCACAAGCCGGTCCAGGCCATGTGGTCATCAGCTTCAGGCCAAGGTCACGAAAAGCACAACTTGATCAaaaa                                                                   ]


>consensus_7080#0 ATCAGAAAATCCATGAAGATAATTGAGCTTGGTTCTAACAGCTAATAGCTGATCAGACCA CCATGGTGGCCTCTCTCCTTTGCACCGTCGCCGTTGCGGTTCTCGCCGTGGCAGCGGTCG GCGGCGAGGCGGGGGTGGTGGAGCACACCTTCGTGGTGCACGAGATGAACGTGACGCACT TGTGCAACACGACCAAGATCTTTGTGGTGAATGGGCAGTTACCGGGCCCGACGGTGGACG TGACAGAGGGTGACACAGTGGTCATCCACGTCGTCAACAAAATACCACATGGGCTTACCA TCCACTGGCACGGTGTTCGCCAATTGAGGAGCTGCTGGGCCGATGGGGCAGGCTTCATCA CCGAGTGCCCCATCCCGCCTGGCAGTGAGCGCACCTACCGCTTCAATGTTACCGACCAAG TCGGCACGCTGTGGTGGCACGCCCACGTCACCTGCCTCCGCTCCACCATCAACGGCGCAT TCATCATCCGTCCCCGCGATGGGAAGTACCCCTTCCCGACACCCGTCAAGGATGTACCGA TCATCATAGGTGAATGGTGGGAGCTCGACCTCGTTGAGCTGGACAGGAGGATGAGGGATG GCAACTTCGACGACAACCCGTTGTCGGCTACGATAAACGGGAAGCTTGGCGACCTTAGCA ACTGCTCCGGCATAGTGGAGGAGAGCTTTGTTCTCAACGTGAAGCATGGGGAGAGCTACC TTCTCCGGGTCATCAACACTGCATTCTTCTCCGAATACTATTTCAAGGTCGCCGGCCACA CGTTCACGGTGGTTGGCGCTGATGGCAACTACCTGACGCCGTTCAAGACAGACATGGTCA CCGTTGCCCCCGGCGAGGCCATTGACGTGCTCATGGTCGCCGACGCCCCACCAGCCCACT ATCACATGATCGCGTTGGCTAACCAACCACCGGAGCCAGACCCACAGATCCCGAAGTACA TCTCTCGTGGCCTCGTCCGCTACACCGGTGTCGATGCCAACAACAATGGCCTACCGGTCC CAATGCCGATCATGCCTAACCAACACAACACCATGCCATCCTACTACTTCCATGCCAATC TTACTGGCCTCATGCATCCGAAGCATCGTCGTGTGCCCATGCACGTCGACGAGCGTATCT TCATCATCCTTGGGCTTGGTACCATCTGTCGTGGTCGGAACACCACCTGCAAGCGGCAGC GCAGCCTGGAGACCATCGAGGTGGCCACCATGAACAATGTCTCCTTCACCCACCCAAACA CCACTGCGCTCCTCGAGCGCTACTACGACGGCACTCCAGAAGGCGTTTACACGGAGGACT TCCCCGTTCGGCCACCACGGCCATACAACTACACCAACCCTGCTCTCATCCCTCCTGGCC CTCTCGAAGAGGTGCTGGAGCCAACATTCAAGGCGACCAAGCTGAAACGGTTCAAGTATA ACACATCAGTGGAGATCATCTTCCAAAGCAGCACGTTGTTGATGAGTGACTCCAACCCCA TGCACCTCCATGGCTATGACGTCTTCCTCCTTGCGCAGGGGCTTGGCAGCTTCAACGCCA AGAGGGACATCAGGAAGTTCAACTACCACAACCCTCAGCTCAGGAACACCATATTGGTTC CCCGCGGTGGTTGGGCCGCCGTCCGCTTCATCACAGACAATCCAGGGATGTGGTACTTGC ACTGTCACTTTGAGTTCCACATCATTATGGGCATGGCGACGGCGTTCATCGTGGAGGATG GGCCAACACCGGAGACGAGCCTGCCTCCACCGCCGCCGGAGTTCAAGAGATGTGATGCCT CTTGAAGCAACTTATCCTAACAACTATGGCAAGGACCTTCCTCCTCTTTGCCAGTATTCA CTAGATAATGGCATTGCCTTTGGGGCATTTTATTCTTGTATTGCATTAGTTAAGACGTAC ATGTTAAATTCCAGCGTGCACAAGCCGGTCCAGGCCATGTGGTCATCAGCTTCAGGCCAA GGTCACGAAAAGCACAACTTGATCATCTGCATCTTGTTATGTACTCCCTCCGTTTTTTGT TTGATTTTTTTTTCTTGTCAAACTTCTTTAATTTAA



consensusID : consensus_7080#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2046
fasta sequence
                              [ACTTCATCACAAAACCTACCAAGCTAATTCAGCATTTCAGCTTGGTTCTATAGGTAGGAGCTGGTAAGATCACCATGGAGAAGCTCTCCATGGTGACCTCTCTCCTCTGCGCCATCACTGTCGCGGTTCTCGCCGTGGCGGTGGTCAGCGGCGAGGCGGCTGTGGTGGAGCACACCTTCGTGGTGCACGAGATGAACGCGACGCACCTGTGCAACACGACCAAGATCTACGTGGTGAACGGACAGTTCCCGGGCCCCACGGTGGACGTGACGGAGGGCGACACGGTGGTTGTCCATGTCATCAACAAGCTGCCATTTGGGCTTACCATCCATTGGCATGGTGTCCGCCAGATGAGGAGCTGCTGGGCTGATGGGGCTGGTTTTGTCACCGAGTGTCCTATCCCACCCGGAAACGAGCACACCTACCGCTTCAACGTCACCGGCCAGGTCGGCACGCTGTGGTGGCACGCCCACGTCACCTGCCTCCGGGCCACCATCAATGGTGCCTTCATCGTTCGCCCTCGTGATGGGAAGTACCCCTTCCCGACACCGGCCAAGGACGTGCCGATCATCATAGGAGAATGGTGGGAGCTTGACCTCATCGAGCTAGATAGAAGGATGATGGATGGCAACTTCGACGACAACCCGTTGTCTGCGACGATCAATGGGAAGCTCGGCGACCTCAGCAACTGCTCTCGCATGGTGGAGGAAAGCTTCATCCTCGACGTTAAGCACGGGGAGAGCTACCTTCTCCGGGTCATCAACACTGCACTCTTCTCTGAATACTACTTCAGGGTCGCCGGCCACACGTTCACGGTGGTCGGCGCCGATGGCAACTACCTGACGCCATTTAAGACGGACATGGTCACCGTCGCCCCTGGCGAGGCCATCGACGTGATCATGGTCGCCGACGCGCCACCGGCGCACTACCACATGATCGCGCTGGCTAACCAACCTCCGGAGCCGGACCCGCAGATCCCGGTGTTCACCTCTCGTGGCCTTGTCCGCTACGCCGGCACCACCGCCACAACAACGGCCTCCCGGTACCGATGCCGATCATGCCCAACCAACACAACACCATGCCGTCCTACTACTTCCACGCCAACCTCACCGGCCTTGCCCACCCAGAGCGCCATCGTGTCCCTATGCATGTCGACGAGCGCCTCTTCGTCACCTTGGGGCTCGGCTCCATATGCCGTGGCCAGAACACCACCTGCAAGCGGCGGCGCAGCCCGGAGACCATCGTGGTGGCCACCATGAACAACGTCTCCTTCGCCCACCCGAAAACCACCGCGCTCCTCGAGCGCTACTACGACGGCACATCGAAGGGCGTGTACACGGAGGACTTCCCCATCCGGCCGCCGCGGCCTTTCAACTACACCAACCGTGATCTCATCCCTCCCGGCCCGCTCGAGGAGGCGTTGGAGCCGACGTTCAAGGCGACCAAGCTGAAGCGGTTCAAGTACAACACATCGGTGGAGATCATCTTCCAGAGCACCACGCTGATGCAGAGCGACTCCAACCCCATGCACCTCCATGGCTATGATGTCTTCCTCCTTGCACAGGGGCTCGGCAACTTTAACGCCAAGAGGGATGTCAGGAAGTTCAACTACCACAACCCGCAGCTAAGGAACACCGTGCAGGTTCCACGTGGCGGGTGGGCCGCCATTCGCTTCGTCACAGACAATCCAGGGATGTGGTACCTACACTGTCACTTTGAGTTCCACATCATTATGGGCATGGCGACGGCGTTCATCGTGGAGGATGGGCCGACACCAGAGACGAGCCTGCCTCCACCACCACCGGAGTTCAAGAGATGTGGCAACAATGGTCTGAGTCAACCATGAGGGTTTTGAAGAGAAAGTCCAAATTTTTTACTGCTACGAGTAATAAAAAATAAAAAATGCATGGATTTGTAGTATGCATTGTATTGGTGATGATTATTCTTACTGTAAAAGAGATTTACTATTCTTTTTTGGTATTCATTGTTGTAAGGTGGCAAAGTGTAAGTAAATCCATTTGGATTTAATTTATGAAGAAGAGAACA]

[+] EMBL AK103094             [ACTTCATCACAAAACCTACCAAGCTAATTCAGCATTTCAGCTTGGTTCTATAGGTAGGAGCTGGTAAGATCACCATGGAGAAGCTCTCCATGGTGACCTCTCTCCTCTGCGCCATCACTGTCGCGGTTCTCGCCGTGGCGGTGGTCAGCGGCGAGGCGGCTGTGGTGGAGCACACCTTCGTGGTGCACGAGATGAACGCGACGCACCTGTGCAACACGACCAAGATCTACGTGGTGAACGGACAGTTCCCGGGCCCCACGGTGGACGTGACGGAGGGCGACACGGTGGTTGTCCATGTCATCAACAAGCTGCCATTTGGGCTTACCATCCATTGGCATGGTGTCCGCCAGATGAGGAGCTGCTGGGCTGATGGGGCTGGTTTTGTCACCGAGTGTCCTATCCCACCCGGAAACGAGCACACCTACCGCTTCAACGTCACCGGCCAGGTCGGCACGCTGTGGTGGCACGCCCACGTCACCTGCCTCCGGGCCACCATCAATGGTGCCTTCATCGTTCGCCCTCGTGATGGGAAGTACCCCTTCCCGACACCGGCCAAGGACGTGCCGATCATCATAGGAGAATGGTGGGAGCTTGACCTCATCGAGCTAGATAGAAGGATGATGGATGGCAACTTCGACGACAACCCGTTGTCTGCGACGATCAATGGGAAGCTCGGCGACCTCAGCAACTGCTCTCGCATGGTGGAGGAAAGCTTCATCCTCGACGTTAAGCACGGGGAGAGCTACCTTCTCCGGGTCATCAACACTGCACTCTTCTCTGAATACTACTTCAGGGTCGCCGGCCACACGTTCACGGTGGTCGGCGCCGATGGCAACTACCTGACGCCATTTAAGACGGACATGGTCACCGTCGCCCCTGGCGAGGCCATCGACGTGATCATGGTCGCCGACGCGCCACCGGCGCACTACCACATGATCGCGCTGGCTAACCAACCTCCGGAGCCGGACCCGCAGATCCCGGTGTTCACCTCTCGTGGCCTTGTCCGCTACGCCGGCACCACCGCCACAACAACGGCCTCCCGGTACCGATGCCGATCATGCCCAACCAACACAACACCATGCCGTCCTACTACTTCCACGCCAACCTCACCGGCCTTGCCCACCCAGAGCGCCATCGTGTCCCTATGCATGTCGACGAGCGCCTCTTCGTCACCTTGGGGCTCGGCTCCATATGCCGTGGCCAGAACACCACCTGCAAGCGGCGGCGCAGCCCGGAGACCATCGTGGTGGCCACCATGAACAACGTCTCCTTCGCCCACCCGAAAACCACCGCGCTCCTCGAGCGCTACTACGACGGCACATCGAAGGGCGTGTACACGGAGGACTTCCCCATCCGGCCGCCGCGGCCTTTCAACTACACCAACCGTGATCTCATCCCTCCCGGCCCGCTCGAGGAGGCGTTGGAGCCGACGTTCAAGGCGACCAAGCTGAAGCGGTTCAAGTACAACACATCGGTGGAGATCATCTTCCAGAGCACCACGCTGATGCAGAGCGACTCCAACCCCATGCACCTCCATGGCTATGATGTCTTCCTCCTTGCACAGGGGCTCGGCAACTTTAACGCCAAGAGGGATGTCAGGAAGTTCAACTACCACAACCCGCAGCTAAGGAACACCGTGCAGGTTCCACGTGGCGGGTGGGCCGCCATTCGCTTCGTCACAGACAATCCAGGGATGTGGTACCTACACTGTCACTTTGAGTTCCACATCATTATGGGCATGGCGACGGCGTTCATCGTGGAGGATGGGCCGACACCAGAGACGAGCCTGCCTCCACCACCACCGGAGTTCAAGAGATGTGGCAACAATGGTCTGAGTCAACCATGAGGGTTTTGAAGAGAAAGTCCAAATTTTTTACTGCTACGAGTAATAAAAAATAAAAAATGCATGGATTTGTAGTATGCATTGTATTGGTGATGATTATTCTTACTGTAAAAGAGATTTACTATTCTTTTTTGGTATTCATTGTTGTAAGGTGGCAAAGTGTAAGTAAATCCATTTGGATTTAATTTATGAAGAAGAGAACA]


>consensus_7080#1 ACTTCATCACAAAACCTACCAAGCTAATTCAGCATTTCAGCTTGGTTCTATAGGTAGGAG CTGGTAAGATCACCATGGAGAAGCTCTCCATGGTGACCTCTCTCCTCTGCGCCATCACTG TCGCGGTTCTCGCCGTGGCGGTGGTCAGCGGCGAGGCGGCTGTGGTGGAGCACACCTTCG TGGTGCACGAGATGAACGCGACGCACCTGTGCAACACGACCAAGATCTACGTGGTGAACG GACAGTTCCCGGGCCCCACGGTGGACGTGACGGAGGGCGACACGGTGGTTGTCCATGTCA TCAACAAGCTGCCATTTGGGCTTACCATCCATTGGCATGGTGTCCGCCAGATGAGGAGCT GCTGGGCTGATGGGGCTGGTTTTGTCACCGAGTGTCCTATCCCACCCGGAAACGAGCACA CCTACCGCTTCAACGTCACCGGCCAGGTCGGCACGCTGTGGTGGCACGCCCACGTCACCT GCCTCCGGGCCACCATCAATGGTGCCTTCATCGTTCGCCCTCGTGATGGGAAGTACCCCT TCCCGACACCGGCCAAGGACGTGCCGATCATCATAGGAGAATGGTGGGAGCTTGACCTCA TCGAGCTAGATAGAAGGATGATGGATGGCAACTTCGACGACAACCCGTTGTCTGCGACGA TCAATGGGAAGCTCGGCGACCTCAGCAACTGCTCTCGCATGGTGGAGGAAAGCTTCATCC TCGACGTTAAGCACGGGGAGAGCTACCTTCTCCGGGTCATCAACACTGCACTCTTCTCTG AATACTACTTCAGGGTCGCCGGCCACACGTTCACGGTGGTCGGCGCCGATGGCAACTACC TGACGCCATTTAAGACGGACATGGTCACCGTCGCCCCTGGCGAGGCCATCGACGTGATCA TGGTCGCCGACGCGCCACCGGCGCACTACCACATGATCGCGCTGGCTAACCAACCTCCGG AGCCGGACCCGCAGATCCCGGTGTTCACCTCTCGTGGCCTTGTCCGCTACGCCGGCACCA CCGCCACAACAACGGCCTCCCGGTACCGATGCCGATCATGCCCAACCAACACAACACCAT GCCGTCCTACTACTTCCACGCCAACCTCACCGGCCTTGCCCACCCAGAGCGCCATCGTGT CCCTATGCATGTCGACGAGCGCCTCTTCGTCACCTTGGGGCTCGGCTCCATATGCCGTGG CCAGAACACCACCTGCAAGCGGCGGCGCAGCCCGGAGACCATCGTGGTGGCCACCATGAA CAACGTCTCCTTCGCCCACCCGAAAACCACCGCGCTCCTCGAGCGCTACTACGACGGCAC ATCGAAGGGCGTGTACACGGAGGACTTCCCCATCCGGCCGCCGCGGCCTTTCAACTACAC CAACCGTGATCTCATCCCTCCCGGCCCGCTCGAGGAGGCGTTGGAGCCGACGTTCAAGGC GACCAAGCTGAAGCGGTTCAAGTACAACACATCGGTGGAGATCATCTTCCAGAGCACCAC GCTGATGCAGAGCGACTCCAACCCCATGCACCTCCATGGCTATGATGTCTTCCTCCTTGC ACAGGGGCTCGGCAACTTTAACGCCAAGAGGGATGTCAGGAAGTTCAACTACCACAACCC GCAGCTAAGGAACACCGTGCAGGTTCCACGTGGCGGGTGGGCCGCCATTCGCTTCGTCAC AGACAATCCAGGGATGTGGTACCTACACTGTCACTTTGAGTTCCACATCATTATGGGCAT GGCGACGGCGTTCATCGTGGAGGATGGGCCGACACCAGAGACGAGCCTGCCTCCACCACC ACCGGAGTTCAAGAGATGTGGCAACAATGGTCTGAGTCAACCATGAGGGTTTTGAAGAGA AAGTCCAAATTTTTTACTGCTACGAGTAATAAAAAATAAAAAATGCATGGATTTGTAGTA TGCATTGTATTGGTGATGATTATTCTTACTGTAAAAGAGATTTACTATTCTTTTTTGGTA TTCATTGTTGTAAGGTGGCAAAGTGTAAGTAAATCCATTTGGATTTAATTTATGAAGAAG AGAACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7080#0      -----ATCAGAAAATCCATGAAGATAATTGAGC--------TTGGTTCTAACAGCTAATA 47
consensus_7080#1      ACTTCATCACAAAACCTACCAAGCTAATTCAGCATTTCAGCTTGGTTCTA-TAGGTAGGA 59
                           **** **** * *  *** ***** ***        *********  ** **  *

consensus_7080#0      GCTGATCAGACCACCATGG---------------TGGCCTCTCTCCTTTGCACCGTCGCC 92
consensus_7080#1      GCTGGTAAGATCACCATGGAGAAGCTCTCCATGGTGACCTCTCTCCTCTGCGCCATCACT 119
                      **** * *** ********               ** ********** *** ** ** * 

consensus_7080#0      GTTGCGGTTCTCGCCGTGGCAGCGGTCGGCGGCGAGGCGGGGGTGGTGGAGCACACCTTC 152
consensus_7080#1      GTCGCGGTTCTCGCCGTGGCGGTGGTCAGCGGCGAGGCGGCTGTGGTGGAGCACACCTTC 179
                      ** ***************** * **** ************  ******************

consensus_7080#0      GTGGTGCACGAGATGAACGTGACGCACTTGTGCAACACGACCAAGATCTTTGTGGTGAAT 212
consensus_7080#1      GTGGTGCACGAGATGAACGCGACGCACCTGTGCAACACGACCAAGATCTACGTGGTGAAC 239
                      ******************* ******* *********************  ******** 

consensus_7080#0      GGGCAGTTACCGGGCCCGACGGTGGACGTGACAGAGGGTGACACAGTGGTCATCCACGTC 272
consensus_7080#1      GGACAGTTCCCGGGCCCCACGGTGGACGTGACGGAGGGCGACACGGTGGTTGTCCATGTC 299
                      ** ***** ******** ************** ***** ***** *****  **** ***

consensus_7080#0      GTCAACAAAATACCACATGGGCTTACCATCCACTGGCACGGTGTTCGCCAATTGAGGAGC 332
consensus_7080#1      ATCAACAAGCTGCCATTTGGGCTTACCATCCATTGGCATGGTGTCCGCCAGATGAGGAGC 359
                       *******  * ***  *************** ***** ***** *****  ********

consensus_7080#0      TGCTGGGCCGATGGGGCAGGCTTCATCACCGAGTGCCCCATCCCGCCTGGCAGTGAGCGC 392
consensus_7080#1      TGCTGGGCTGATGGGGCTGGTTTTGTCACCGAGTGTCCTATCCCACCCGGAAACGAGCAC 419
                      ******** ******** ** **  ********** ** ***** ** ** *  **** *

consensus_7080#0      ACCTACCGCTTCAATGTTACCGACCAAGTCGGCACGCTGTGGTGGCACGCCCACGTCACC 452
consensus_7080#1      ACCTACCGCTTCAACGTCACCGGCCAGGTCGGCACGCTGTGGTGGCACGCCCACGTCACC 479
                      ************** ** **** *** *********************************

consensus_7080#0      TGCCTCCGCTCCACCATCAACGGCGCATTCATCATCCGTCCCCGCGATGGGAAGTACCCC 512
consensus_7080#1      TGCCTCCGGGCCACCATCAATGGTGCCTTCATCGTTCGCCCTCGTGATGGGAAGTACCCC 539
                      ********  ********** ** ** ****** * ** ** ** ***************

consensus_7080#0      TTCCCGACACCCGTCAAGGATGTACCGATCATCATAGGTGAATGGTGGGAGCTCGACCTC 572
consensus_7080#1      TTCCCGACACCGGCCAAGGACGTGCCGATCATCATAGGAGAATGGTGGGAGCTTGACCTC 599
                      *********** * ****** ** ************** ************** ******

consensus_7080#0      GTTGAGCTGGACAGGAGGATGAGGGATGGCAACTTCGACGACAACCCGTTGTCGGCTACG 632
consensus_7080#1      ATCGAGCTAGATAGAAGGATGATGGATGGCAACTTCGACGACAACCCGTTGTCTGCGACG 659
                       * ***** ** ** ******* ****************************** ** ***

consensus_7080#0      ATAAACGGGAAGCTTGGCGACCTTAGCAACTGCTCCGGCATAGTGGAGGAGAGCTTTGTT 692
consensus_7080#1      ATCAATGGGAAGCTCGGCGACCTCAGCAACTGCTCTCGCATGGTGGAGGAAAGCTTCATC 719
                      ** ** ******** ******** ***********  **** ******** *****  * 

consensus_7080#0      CTCAACGTGAAGCATGGGGAGAGCTACCTTCTCCGGGTCATCAACACTGCATTCTTCTCC 752
consensus_7080#1      CTCGACGTTAAGCACGGGGAGAGCTACCTTCTCCGGGTCATCAACACTGCACTCTTCTCT 779
                      *** **** ***** ************************************ ******* 

consensus_7080#0      GAATACTATTTCAAGGTCGCCGGCCACACGTTCACGGTGGTTGGCGCTGATGGCAACTAC 812
consensus_7080#1      GAATACTACTTCAGGGTCGCCGGCCACACGTTCACGGTGGTCGGCGCCGATGGCAACTAC 839
                      ******** **** *************************** ***** ************

consensus_7080#0      CTGACGCCGTTCAAGACAGACATGGTCACCGTTGCCCCCGGCGAGGCCATTGACGTGCTC 872
consensus_7080#1      CTGACGCCATTTAAGACGGACATGGTCACCGTCGCCCCTGGCGAGGCCATCGACGTGATC 899
                      ******** ** ***** ************** ***** *********** ****** **

consensus_7080#0      ATGGTCGCCGACGCCCCACCAGCCCACTATCACATGATCGCGTTGGCTAACCAACCACCG 932
consensus_7080#1      ATGGTCGCCGACGCGCCACCGGCGCACTACCACATGATCGCGCTGGCTAACCAACCTCCG 959
                      ************** ***** ** ***** ************ ************* ***

consensus_7080#0      GAGCCAGACCCACAGATCCCGAAGTACATCTCTCGTGGCCTCGTCCGCTACACCGGTGTC 992
consensus_7080#1      GAGCCGGACCCGCAGATCCCGGTGTTCACCTCTCGTGGCCTTGTCCGCTACGCCGGCACC 1019
                      ***** ***** *********  ** ** ************ ********* ****   *

consensus_7080#0      GATGCCAACAACAATGGCCTACCGGTCCCAATGCCGATCATGCCTAACCAACACAACACC 1052
consensus_7080#1      ACCGCCA-CAACAACGGCCTCCCGGTACCGATGCCGATCATGCCCAACCAACACAACACC 1078
                         **** ****** ***** ***** ** ************** ***************

consensus_7080#0      ATGCCATCCTACTACTTCCATGCCAATCTTACTGGCCTCATGCATCCGAAGCATCGTCGT 1112
consensus_7080#1      ATGCCGTCCTACTACTTCCACGCCAACCTCACCGGCCTTGCCCACCCAGAGCGCCATCGT 1138
                      ***** ************** ***** ** ** *****    ** **  ***  * ****

consensus_7080#0      GTGCCCATGCACGTCGACGAGCGTATCTTCATCATCCTTGGGCTTGGTACCATCTGTCGT 1172
consensus_7080#1      GTCCCTATGCATGTCGACGAGCGCCTCTTCGTCACCTTGGGGCTCGGCTCCATATGCCGT 1198
                      ** ** ***** ***********  ***** *** * * ***** **  **** ** ***

consensus_7080#0      GGTCGGAACACCACCTGCAAGCGGCAGCGCAGCCTGGAGACCATCGAGGTGGCCACCATG 1232
consensus_7080#1      GGCCAGAACACCACCTGCAAGCGGCGGCGCAGCCCGGAGACCATCGTGGTGGCCACCATG 1258
                      ** * ******************** ******** *********** *************

consensus_7080#0      AACAATGTCTCCTTCACCCACCCAAACACCACTGCGCTCCTCGAGCGCTACTACGACGGC 1292
consensus_7080#1      AACAACGTCTCCTTCGCCCACCCGAAAACCACCGCGCTCCTCGAGCGCTACTACGACGGC 1318
                      ***** ********* ******* ** ***** ***************************

consensus_7080#0      ACTCCAGAAGGCGTTTACACGGAGGACTTCCCCGTTCGGCCACCACGGCCATACAACTAC 1352
consensus_7080#1      ACATCGAAGGGCGTGTACACGGAGGACTTCCCCATCCGGCCGCCGCGGCCTTTCAACTAC 1378
                      **  *  * ***** ****************** * ***** ** ***** * *******

consensus_7080#0      ACCAACCCTGCTCTCATCCCTCCTGGCCCTCTCGAAGAGGTGCTGGAGCCAACATTCAAG 1412
consensus_7080#1      ACCAACCGTGATCTCATCCCTCCCGGCCCGCTCGAGGAGGCGTTGGAGCCGACGTTCAAG 1438
                      ******* ** ************ ***** ***** **** * ******* ** ******

consensus_7080#0      GCGACCAAGCTGAAACGGTTCAAGTATAACACATCAGTGGAGATCATCTTCCAAAGCAGC 1472
consensus_7080#1      GCGACCAAGCTGAAGCGGTTCAAGTACAACACATCGGTGGAGATCATCTTCCAGAGCACC 1498
                      ************** *********** ******** ***************** **** *

consensus_7080#0      ACGTTGTTGATGAGTGACTCCAACCCCATGCACCTCCATGGCTATGACGTCTTCCTCCTT 1532
consensus_7080#1      ACGCTGATGCAGAGCGACTCCAACCCCATGCACCTCCATGGCTATGATGTCTTCCTCCTT 1558
                      *** ** **  *** ******************************** ************

consensus_7080#0      GCGCAGGGGCTTGGCAGCTTCAACGCCAAGAGGGACATCAGGAAGTTCAACTACCACAAC 1592
consensus_7080#1      GCACAGGGGCTCGGCAACTTTAACGCCAAGAGGGATGTCAGGAAGTTCAACTACCACAAC 1618
                      ** ******** **** *** **************  ***********************

consensus_7080#0      CCTCAGCTCAGGAACACCATATTGGTTCCCCGCGGTGGTTGGGCCGCCGTCCGCTTCATC 1652
consensus_7080#1      CCGCAGCTAAGGAACACCGTGCAGGTTCCACGTGGCGGGTGGGCCGCCATTCGCTTCGTC 1678
                      ** ***** ********* *   ****** ** ** ** ********* * ****** **

consensus_7080#0      ACAGACAATCCAGGGATGTGGTACTTGCACTGTCACTTTGAGTTCCACATCATTATGGGC 1712
consensus_7080#1      ACAGACAATCCAGGGATGTGGTACCTACACTGTCACTTTGAGTTCCACATCATTATGGGC 1738
                      ************************ * *********************************

consensus_7080#0      ATGGCGACGGCGTTCATCGTGGAGGATGGGCCAACACCGGAGACGAGCCTGCCTCCACCG 1772
consensus_7080#1      ATGGCGACGGCGTTCATCGTGGAGGATGGGCCGACACCAGAGACGAGCCTGCCTCCACCA 1798
                      ******************************** ***** ******************** 

consensus_7080#0      CCGCCGGAGTTCAAGAGATGTGATGCCTCTTGAAGCAACTTATCCTAACAACTATGGCAA 1832
consensus_7080#1      CCACCGGAGTTCAAGAGATGTGGCAACAATGGTCTGAGTCAACCATGAGGGTTTTGAAGA 1858
                      ** *******************    *  * *    *    * * * *    * **   *

consensus_7080#0      GGACCTTCCTCCTCTTTGCCAGTATTCACTAGATAATGGCATTGCCTTTGGGGCATTTTA 1892
consensus_7080#1      GAAAGTCCAAATTTTTTACTGCTACG-AGTAATAAAAAATAAAAAATGCATGGATTTGTA 1917
                      * *  * *    * *** *   **   * **   **    *     *    **  ** **

consensus_7080#0      TTCTTGTATTGCATTAGTTAAGAC-GTACATGTTAAATTCCAGCGTGCACAAGCCGGTCC 1951
consensus_7080#1      GTAT-GCATTGTATTGGTGATGATTATTCTTACTGTAAAAGAGATTTACTATTCTTTTTT 1976
                       * * * **** *** ** * **   * * *  *  *    **  *    *  *   *  

consensus_7080#0      AGGCCATGTGGTCATCAGCTTCAGGCCAAGGTCACGAAAAGCACAACTTGATCATCTGCA 2011
consensus_7080#1      GGTATTCATTGTTGTAAGGT---GGCAAAGTGTAAGTAAATC-CATTTGGATTTAATTTA 2032
                       *      * **  * ** *   *** ***   * * *** * **  * ***    *  *

consensus_7080#0      TCTTGTTATGTACTCCCTCCGTTTTTTGTTTGATTTTTTTTTCTTGTCAAACTTCTTTAA 2071
consensus_7080#1      TGAAGAAGAGAACA---------------------------------------------- 2046
                      *   *    * **                                               

consensus_7080#0      TTTAA 2076
consensus_7080#1      -----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)