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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7084 cluster # 7084       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7084#0 length = 676 sequences # 4  

consensusID : consensus_7084#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 676
fasta sequence
                              [GAGTAGAAAAGGGCCGCTTCGCTCAGAGCGCTAGGGCTCCCCAAAACAGTTCCTCTCCGCCGTTCCCCACCGCCTGTTTCGTGATCCCGCCGCCGCCTCT-CTCGTCCGGAGGACCGG-AGCCCGTTCGGTGCCGTTGCCTTCCTCCACGCGCGGGACGGTGCTACCTACCTGCCCGCCGGCCGCTTCTCTCCGTCGAACCGC-ACCACCGCTTTACGAACGCCTCCAGCCGGATAGCCCACGGCCGA-TGCCATCTTCCT-CCTCGTGCAGGAGGCCGCTGCTGTCATTCCTCGTGAAGGTGGCTGCTTGACATCCCCAGGTGAGATATGTGGGGTGCAGCATTGCTGGTGATTCAAGATTAGAAAGACTAAAATGAA-CAAGAGGCCGCTTAAGAAATACCATAGAACAACCAAAGACAGAACAATAGAGTGAAGACATGCTGCTTTCTGAA-GGAATTTATTCTGGGAGCTGATGTGTG-TGGAA-GTAGTTAGTTTTGCCTGATGTATGTAGTCTTTCTTTGTAATATGTACTATGTATAGCCTGTACATGGTTAAGAGTTTGCAAGGATTGTAGTCCAGATGCTATAAATTTGAAACCCA-TTTTTTTGGTTCAAATTGCAAATATCTGTACAATGCAGTTTTTTTTTTTATCTGAAATAAGTATGACGTGTAAAAAAAAA]

[+] EMBL CF316623             [GAGTAGAAAAGGGCCGCTTCGCTCAGAGCGCTAGGGCTCCCCAAAACAGTTCCTCTCCGCCGTTCCCCACCGCCTGTTTCGTGATCCCGCCGCCGCCTCT CTCGTCCGGAGGACCGG AGCCCGTTCGGTGCCGTTGCCTTCCTCCACGCGCGGGACGGTGCTACCTACCTGCCCGCCGGCCGCTTCTCTCCGTCGAACCGC ACCACCGCTTTACGAACGCCTCCAGCCGGATAGCCCACGGCCGA TGCCATCTTCCT CCTCGTGCAGGAGGCCGCTGCTGTCATTCCTCGTGAAGGTGGCTGCTTGACATCCCCAGGTGAGATATGTGGGGTGCAGCATTGCTGGTGATTCAAGATTAGAAAGACTAAAATGAA CAAGAGGCCGCTTAAGAAATACCATAGAACAACCAAAGACAGAACAATAGAGTGAAGACATGCTGCTTTCTGAA GGAATTTATTCTGGGAGCTGATGTGTGTTGGAANGTAGTTAGTTTTGCCTGATGTATGTAGTCTTTCTTTGTAATATGTACTATGTATAGCCTGTACATGGTTAAGAGTTTGCAAGGATTGTAGTCCAGATGCTATAAATTTGAAACCCATTTTTTTTGGTTC                                                                    ]
[+] EMBL AU092766             [                                                                                             CGCCTCTNCTCGTCCGGAGGCCCGG AGCCCGTTCGGTGCCGTTGCCTTCCTCCACGCGCGGGACGGTGCTACCTACCTGCCCGNCGGCCGCTTCTCTCCGTCGAACCGC ACCACCGCTTTACGAACGCCTCCAGCCGGATAGCCCACGG CGA TGCCATCTTCCTCCCTCGTGCAGGAGGCCGCTGCTGTCATTCCTCGTGAAGGTGGCTGCTTGACATCCCCAGGTGAGATATGTGGGGTGCAGCATTGCTGGTGATTCAAGATTAGAAAGACTANAATGAACCAAGAGGCCGCTTAAGAAATACCATAGAACAACCAAAGACAGAACAATAGAGTGAAGACATGCTGCTTTCTGAA GGAATTTATTCTGGGAGCTGATGTGTG TGGAA GTAGTTAGTTTTGCCTGATGTATGTAGTCTTTCTTTGTAATATGTACTATGTATAGCCTGTACATGGTTAAGAGTTTGCAAGGATTGTAGTCCAGATGCTATAAATTTGAAACCCA TTTTTTTGGTTCAAATTGCAAATATCTGTACAATGCAGTTTTTTTTTTTATCTGAAATAAGTATGACGTGTAAAAAAAAA]
[+] EMBL C27929               [                                                                                              GCCTCT NTCGTCCGGAG  CCGGNAGCCCGTTCGGTGCCGTTGCCTTCCTCCACGCGCGGGACGGTGCTACCTACCTGCCCGCCGGCCGCTTCTNTCCGTCGAACCGC ACCACCGCTTTACGAACGCCTCCAGCCGGATAGCCCACGG CGATTGCCATCTTCCT CCTCGTGCAGGAGGCCGCTGCTGTNATTCCTCGTGAAGGTGGCTGCTTGANATCCCCAGGTGAGATATGTGGGGTGCAGCATTGCTGGTGATTCAAGATTAGAAAGACTAAAATGAA CAAGAGGCCGCTTAAGAAATACCATAGAACAACCAAAGACAGAACAATAGAGTGAAGACATGCTGCTTTCTTAAGGGAATTTAatt                                                                                                                                                                                                                            ]
[-] EMBL CF316624             [                                                                                                                                       TTGCCTTCCTCCACGCGCGGGACGGTGCTACCTACCTGCCCGCCGGCCGCTTCTCTCCGTCGAACCGCAACCCCCGCTTTACGAACGCCTCCAGCCGGATAGCCCACGGCCGA TGCCATCTTCCT CCTCGTGCAGGAGGCCGCTGCTGTCATTCCTCGTGAAGGTGGCTGCTTGACATCCCCAGGTGAGATATGTGGGGTGCAGCATTGCTGGTGATTCAAGATTAGAAAGACTAAAATGAA CAAGAGGCCGCTTAAGAAATACCATAGAACAACCAAAGACAGAACAATAGAGTGAAGACATGCTGCTTTCTGAA GGAATTTATTCTGGGAGCTGATGTGTG TGGAA GTAGTTAGTTTTGCCTGATGTATGTAGTCTTTCTTTGTAATATGTACTATGTATAGCCTGTACATGGTTAAGAGTTTGCAAGGATTGTAGTCCAGATGCTATAAATTTGAAACCCA TTTTTTTGGTTCA                                                                   ]


>consensus_7084#0 GAGTAGAAAAGGGCCGCTTCGCTCAGAGCGCTAGGGCTCCCCAAAACAGTTCCTCTCCGC CGTTCCCCACCGCCTGTTTCGTGATCCCGCCGCCGCCTCTCTCGTCCGGAGGACCGGAGC CCGTTCGGTGCCGTTGCCTTCCTCCACGCGCGGGACGGTGCTACCTACCTGCCCGCCGGC CGCTTCTCTCCGTCGAACCGCACCACCGCTTTACGAACGCCTCCAGCCGGATAGCCCACG GCCGATGCCATCTTCCTCCTCGTGCAGGAGGCCGCTGCTGTCATTCCTCGTGAAGGTGGC TGCTTGACATCCCCAGGTGAGATATGTGGGGTGCAGCATTGCTGGTGATTCAAGATTAGA AAGACTAAAATGAACAAGAGGCCGCTTAAGAAATACCATAGAACAACCAAAGACAGAACA ATAGAGTGAAGACATGCTGCTTTCTGAAGGAATTTATTCTGGGAGCTGATGTGTGTGGAA GTAGTTAGTTTTGCCTGATGTATGTAGTCTTTCTTTGTAATATGTACTATGTATAGCCTG TACATGGTTAAGAGTTTGCAAGGATTGTAGTCCAGATGCTATAAATTTGAAACCCATTTT TTTGGTTCAAATTGCAAATATCTGTACAATGCAGTTTTTTTTTTTATCTGAAATAAGTAT GACGTGTAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)