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Oryza sativa
cluster # 7097 cluster # 7097       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7097#0 length = 2511 sequences # 2  
consensus_7097#1 length = 767 sequences # 1  
consensus_7097#2 length = 695 sequences # 1  

consensusID : consensus_7097#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2511
fasta sequence
                              [GAGCGCGGGGAACGGAACGGGACGGCAGATTCTGGGGAAGAAATGGCGGACGTGCAGTCGCCGCCGCCGCCGCCGCCGCCGAGCGGCCAGCGGCGGCTCGTCGGGCCAGCGCCGGACGCCCTGGGCTCGCTCCCCCTCGACGTCCTCGACAGCATCCTCTCCCGCCTCCACATCCACGACGTGGTCCGCACCTCCGCGCTGTCCCGATCGTGGCGCCGCCGCTGGGAGTCGCTCCCCACCGTCGACCTCACGCGGAGCCCCGGCATCAGCGCCTCCGACGTGGACGCGCTGCTCCTCCGCCGCACCGCGCCCGCCCGCTCCTTCCGCCTCGCCACGCGCGACCGCTCCTGGTCCCCTACCGCCTTCCACGACTGGCTCCTCCGCCTCTCCCGCGGCGGTGGCGGCGGCGGCCTCCGCGACCTGGAGCTGACCCTCCGGTACACGTACATCAACAGCAAGCTCAACTCCTGCCTCTTCTCCTTTCGCGAGCTCACCTCGCTGAGACTCCACTGCTGCGGCCTCCCGCACGTGCCCACTGAGTTCGCCGGGTTCCCGAATCTGAAGACGATGTACCTCTCGGTGGTCAAAGTTCAGAGGCACGGGGGAAGGGGGTTGGCCACCCTGATTGCTGCATCGCCGGTGCTCCAGGAGGTGACTCTCATCGACGTAGTGCTCATTGGAGATGGACCCGACGAAGATTGGGTGATTCGGGCTTCCAATCTGCGGAAATTGACGATAGCTCTTGGCTCTGAATATGGTGGCCGGATGGAAGACCTTCCACGGCTGGAGGAATGTTGTCTCTTTGGCCTGAATTATGCCAAATACTTGACGGGGATGGCGCGAGTCACCAAGCTCACTTTCTACTGCAATTGCATGTTGTCAACTGAAGTTGACGTGCTGGAGCGATTGCCGTTCCTGTTTGAGAACCTTAGAAGCTTAATCCTTGGAGTGAATTTTTGTATGATGTCTCACATCTTGGCTATTTTCTGCCTACTTAGAAGTGCGCCTGTTCTTGAAGAACTCGATGTTTGGAATTGGAGTGAGGGTGCCCAGGAAATGGAAGCAAATGATGTGTTCTTGAATGCTCAGTGGATCAATCATATGTTTGCCAAACTTCATGTTGTGCGCATGAAGAAGGTTTATTGCCTCAATAATGAGATGCACTTTATAGAGTTCATTCTGTCCAAGGCAAGAGTACTGCGAGTGCTTTCCCTCACTCTTGCGTCTGATTCCCTGAGCAGTATTGAGGAAGCAATTATTGATATAACAGAATATCCAAGAGCATCACCTGATGCGCAGGTCATCTTCATGGGTGTAGAGCCAGAATCTGCAAATAAGTAAACATTGTGATTCTGATTTCCTAGCCATGCTGTTCCATACATTCATCCAACTTCTCAGATGTTCTTTACTACACTTGACTTAAAAATTCCTTCCGGTTCAGTCTTTTCTGGACACCCTATGTGTTTTTAGTATTCTTCGCTGTTAATATTGTCTATAGTGTAAATTGTATTATACATCCCTAAACTTGCTTGAGTGCGAAATTACTCCCTGAACTTATAAGCATTTTTTTACTGCACATCCAATAACTCTTTTTTTCCTCAGTGATATGAATGGTTTCCTGGATTTATCCGCTGAGTTTCCTGACGTGGAGGAGGAAGAGACATCAGGCTTAGGATCGCTGGATACTGTACACCCTCGGAGAAGGCAGCGATCCAACGGGGAGTCTGTAGCTCAGCTGCAGCTGCTTCAGGAGCAGCTGCAAGAGCTGGAAAAGGAGAAGGATCAGCACCACAAGCCTACGGTGGAAGAATTGAAAGAGATTATCCAGGAGGGTAAAAAAAACGCAATTAAATTTCAAAATTACTTCGAATCTACCATCCAGTCTCTGTCTAAGCAACACGACCTTAGCCAATTTAGGCTTCCCCCATTGCCAGAGTTCCCATCGGAGCTGTCATCTCATCCGGTCACCACCAGACCAGGAGACACTCCTGTCGATCCTGCTGACAATGTTGCTGCTAATGTACCTGAGGATTCTCGAGAAGGCCATGCTACTTCTGGTGATGCTGATGTTCATGTCCGTTCTCCAATAGACTTCGTTGCCAAATGTGTTGGGAATGGTTGTGCAGAATCTCCAGAAGACCAAATCTGACGAGAGTTTCATGATTCTAGCCATTTCTGTACTTCCTTTTGATGTGAAATTTTTAGTTCTTGACACCCCTCGATGGTGGAACTTAACAGCTAGGTTATGATCTGTTGATAAACATTGCATAGCCAATTTAGTCGGGTAAGGGAAGGCAGCGACAGTTTTTGGATGAACAAATACACAAATTCACGATGGTACTCTAGTTATAGATTGACAGCCTTTGGATGAACAAAGACTGCTTTTGGAATTGACATTTGGGTTCACACTGCAGTTTTCGCTTTCGGCACATATAAGAACCCACTGTCCAGTTGGAGGTTTCCAATCGCACAGCTGAAATAGCAAAATACATAATGTGGAAAAAATCGAAT]

[+] EMBL AK065651             [GAGCGCGGGGAACGGAACGGGACGGCAGATTCTGGGGAAGAAATGGCGGACGTGCAGTCGCCGCCGCCGCCGCCGCCGCCGAGCGGCCAGCGGCGGCTCGTCGGGCCAGCGCCGGACGCCCTGGGCTCGCTCCCCCTCGACGTCCTCGACAGCATCCTCTCCCGCCTCCACATCCACGACGTGGTCCGCACCTCCGCGCTGTCCCGATCGTGGCGCCGCCGCTGGGAGTCGCTCCCCACCGTCGACCTCACGCGGAGCCCCGGCATCAGCGCCTCCGACGTGGACGCGCTGCTCCTCCGCCGCACCGCGCCCGCCCGCTCCTTCCGCCTCGCCACGCGCGACCGCTCCTGGTCCCCTACCGCCTTCCACGACTGGCTCCTCCGCCTCTCCCGCGGCGGTGGCGGCGGCGGCCTCCGCGACCTGGAGCTGACCCTCCGGTACACGTACATCAACAGCAAGCTCAACTCCTGCCTCTTCTCCTTTCGCGAGCTCACCTCGCTGAGACTCCACTGCTGCGGCCTCCCGCACGTGCCCACTGAGTTCGCCGGGTTCCCGAATCTGAAGACGATGTACCTCTCGGTGGTCAAAGTTCAGAGGCACGGGGGAAGGGGGTTGGCCACCCTGATTGCTGCATCGCCGGTGCTCCAGGAGGTGACTCTCATCGACGTAGTGCTCATTGGAGATGGACCCGACGAAGATTGGGTGATTCGGGCTTCCAATCTGCGGAAATTGACGATAGCTCTTGGCTCTGAATATGGTGGCCGGATGGAAGACCTTCCACGGCTGGAGGAATGTTGTCTCTTTGGCCTGAATTATGCCAAATACTTGACGGGGATGGCGCGAGTCACCAAGCTCACTTTCTACTGCAATTGCATGTTGTCAACTGAAGTTGACGTGCTGGAGCGATTGCCGTTCCTGTTTGAGAACCTTAGAAGCTTAATCCTTGGAGTGAATTTTTGTATGATGTCTCACATCTTGGCTATTTTCTGCCTACTTAGAAGTGCGCCTGTTCTTGAAGAACTCGATGTTTGGAATTGGAGTGAGGGTGCCCAGGAAATGGAAGCAAATGATGTGTTCTTGAATGCTCAGTGGATCAATCATATGTTTGCCAAACTTCATGTTGTGCGCATGAAGAAGGTTTATTGCCTCAATAATGAGATGCACTTTATAGAGTTCATTCTGTCCAAGGCAAGAGTACTGCGAGTGCTTTCCCTCACTCTTGCGTCTGATTCCCTGAGCAGTATTGAGGAAGCAATTATTGATATAACAGAATATCCAAGAGCATCACCTGATGCGCAGGTCATCTTCATGGGTGTAGAGCCAGAATCTGCAAATAAGTAAACATTGTGATTCTGATTTCCTAGCCATGCTGTTCCATACATTCATCCAACTTCTCAGATGTTCTTTACTACACTTGACTTAAAAATTCCTTCCGGTTCAGTCTTTTCTGGACACCCTATGTGTTTTTAGTATTCTTCGCTGTTAATATTGTCTATAGTGTAAATTGTATTATACATCCCTAAACTTGCTTGAGTGCGAAATTACTCCCTGAACTTATAAGCATTTTTTTACTGCACATCCAATAACTCTTTTTTTCCTCAGTGATATGAATGGTTTCCTGGATTTATCCGCTGAGTTTCCTGACGTGGAGGAGGAAGAGACATCAGGCTTAGGATCGCTGGATACTGTACACCCTCGGAGAAGGCAGCGATCCAACGGGGAGTCTGTAGCTCAGCTGCAGCTGCTTCAGGAGCAGCTGCAAGAGCTGGAAAAGGAGAAGGATCAGCACCACAAGCCTACGGTGGAAGAATTGAAAGAGATTATCCAGGAGGGTAAAAAAAACGCAATTAAATTTCAAAATTACTTCGAATCTACCATCCAGTCTCTGTCTAAGCAACACGACCTTAGCCAATTTAGGCTTCCCCCATTGCCAGAGTTCCCATCGGAGCTGTCATCTCATCCGGTCACCACCAGACCAGGAGACACTCCTGTCGATCCTGCTGACAATGTTGCTGCTAATGTACCTGAGGATTCTCGAGAAGGCCATGCTACTTCTGGTGATGCTGATGTTCATGTCCGTTCTCCAATAGACTTCGTTGCCAAATGTGTTGGGAATGGTTGTGCAGAATCTCCAGAAGACCAAATCTGACGAGAGTTTCATGATTCTAGCCATTTCTGTACTTCCTTTTGATGTGAAATTTTTAGTTCTTGACACCCCTCGATGGTGGAACTTAACAGCTAGGTTATGATCTGTTGATAAACATTGCATAGCCAATTTAGTCGGGTAAGGGAAGGCAGCGACAGTTTTTGGATGAACAAATACACAAATTCACGATGGTACTCTAGTTATAGATTGACAGCCTTTGGATGAACAAAGACTGCTTTTGGAATTGACATTTGGGTTCACACTGCAGTTTTCGCTTTCGGCACATATAAGAACCCACTGTCCAGTTGGAGGTTTCCAATCGCACAGCTGAAATAGCAAAATACATAATGTGGAAAAAATCGAAT]
[+] EMBL CA766450             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cangGGGGAGTCTGTAGCTCAGCTGCAGCTGCTTCAGGAGCAGCTGCAAGAGCTGGAAAAGGAGAAGGATCAGCACCACAAGCCTACGGTGGAAGAACTGAAAGAGATTATCCAGGAGGGTAAAAAAAACGCAATTAAATTTCAAAATTACTTCGAATCTACCATCCAGTCTCTGTCTAAGCAACTCGACCTTAGCCAATTTAGGCTTCCCCCATTGCCAGAGTTCCCATCGGAGCTGTCATCTCATCCGGTCACCACCAGACCAGGAGACACTCCTGTCGATCCTGCTGACAATGTTGCTGCTAATGTACCTGAGGATTCTCGAGAAGGCCATGCTACTTCCGGTGATGCTGATGTTCATGTCCGTTCTCCAATAGACTTCGTTGCCAAATGTGTTGGGAATGGTTGTGCAGAATCTCCAGAAGACCAAATCTGACGAGAGTTTCATGATTCTAGCCATTTCTGTACTTCCTTTTGATGTGAAATTTTCAGTTCTTGACACCCCTCGATGGTGGAACTTAACAGCTAGGTTATGATCTGNTGATAAACATTGCATAGCCAATTTAGTCGGGTAAGGGAAGGCAGCGACAGTTTTTGGATGAACAAATACACAAATTCACGATGGTACTCTAGTTATAGATTGACAGCCTTTGGA                                                                                                                                               ]


>consensus_7097#0 GAGCGCGGGGAACGGAACGGGACGGCAGATTCTGGGGAAGAAATGGCGGACGTGCAGTCG CCGCCGCCGCCGCCGCCGCCGAGCGGCCAGCGGCGGCTCGTCGGGCCAGCGCCGGACGCC CTGGGCTCGCTCCCCCTCGACGTCCTCGACAGCATCCTCTCCCGCCTCCACATCCACGAC GTGGTCCGCACCTCCGCGCTGTCCCGATCGTGGCGCCGCCGCTGGGAGTCGCTCCCCACC GTCGACCTCACGCGGAGCCCCGGCATCAGCGCCTCCGACGTGGACGCGCTGCTCCTCCGC CGCACCGCGCCCGCCCGCTCCTTCCGCCTCGCCACGCGCGACCGCTCCTGGTCCCCTACC GCCTTCCACGACTGGCTCCTCCGCCTCTCCCGCGGCGGTGGCGGCGGCGGCCTCCGCGAC CTGGAGCTGACCCTCCGGTACACGTACATCAACAGCAAGCTCAACTCCTGCCTCTTCTCC TTTCGCGAGCTCACCTCGCTGAGACTCCACTGCTGCGGCCTCCCGCACGTGCCCACTGAG TTCGCCGGGTTCCCGAATCTGAAGACGATGTACCTCTCGGTGGTCAAAGTTCAGAGGCAC GGGGGAAGGGGGTTGGCCACCCTGATTGCTGCATCGCCGGTGCTCCAGGAGGTGACTCTC ATCGACGTAGTGCTCATTGGAGATGGACCCGACGAAGATTGGGTGATTCGGGCTTCCAAT CTGCGGAAATTGACGATAGCTCTTGGCTCTGAATATGGTGGCCGGATGGAAGACCTTCCA CGGCTGGAGGAATGTTGTCTCTTTGGCCTGAATTATGCCAAATACTTGACGGGGATGGCG CGAGTCACCAAGCTCACTTTCTACTGCAATTGCATGTTGTCAACTGAAGTTGACGTGCTG GAGCGATTGCCGTTCCTGTTTGAGAACCTTAGAAGCTTAATCCTTGGAGTGAATTTTTGT ATGATGTCTCACATCTTGGCTATTTTCTGCCTACTTAGAAGTGCGCCTGTTCTTGAAGAA CTCGATGTTTGGAATTGGAGTGAGGGTGCCCAGGAAATGGAAGCAAATGATGTGTTCTTG AATGCTCAGTGGATCAATCATATGTTTGCCAAACTTCATGTTGTGCGCATGAAGAAGGTT TATTGCCTCAATAATGAGATGCACTTTATAGAGTTCATTCTGTCCAAGGCAAGAGTACTG CGAGTGCTTTCCCTCACTCTTGCGTCTGATTCCCTGAGCAGTATTGAGGAAGCAATTATT GATATAACAGAATATCCAAGAGCATCACCTGATGCGCAGGTCATCTTCATGGGTGTAGAG CCAGAATCTGCAAATAAGTAAACATTGTGATTCTGATTTCCTAGCCATGCTGTTCCATAC ATTCATCCAACTTCTCAGATGTTCTTTACTACACTTGACTTAAAAATTCCTTCCGGTTCA GTCTTTTCTGGACACCCTATGTGTTTTTAGTATTCTTCGCTGTTAATATTGTCTATAGTG TAAATTGTATTATACATCCCTAAACTTGCTTGAGTGCGAAATTACTCCCTGAACTTATAA GCATTTTTTTACTGCACATCCAATAACTCTTTTTTTCCTCAGTGATATGAATGGTTTCCT GGATTTATCCGCTGAGTTTCCTGACGTGGAGGAGGAAGAGACATCAGGCTTAGGATCGCT GGATACTGTACACCCTCGGAGAAGGCAGCGATCCAACGGGGAGTCTGTAGCTCAGCTGCA GCTGCTTCAGGAGCAGCTGCAAGAGCTGGAAAAGGAGAAGGATCAGCACCACAAGCCTAC GGTGGAAGAATTGAAAGAGATTATCCAGGAGGGTAAAAAAAACGCAATTAAATTTCAAAA TTACTTCGAATCTACCATCCAGTCTCTGTCTAAGCAACACGACCTTAGCCAATTTAGGCT TCCCCCATTGCCAGAGTTCCCATCGGAGCTGTCATCTCATCCGGTCACCACCAGACCAGG AGACACTCCTGTCGATCCTGCTGACAATGTTGCTGCTAATGTACCTGAGGATTCTCGAGA AGGCCATGCTACTTCTGGTGATGCTGATGTTCATGTCCGTTCTCCAATAGACTTCGTTGC CAAATGTGTTGGGAATGGTTGTGCAGAATCTCCAGAAGACCAAATCTGACGAGAGTTTCA TGATTCTAGCCATTTCTGTACTTCCTTTTGATGTGAAATTTTTAGTTCTTGACACCCCTC GATGGTGGAACTTAACAGCTAGGTTATGATCTGTTGATAAACATTGCATAGCCAATTTAG TCGGGTAAGGGAAGGCAGCGACAGTTTTTGGATGAACAAATACACAAATTCACGATGGTA CTCTAGTTATAGATTGACAGCCTTTGGATGAACAAAGACTGCTTTTGGAATTGACATTTG GGTTCACACTGCAGTTTTCGCTTTCGGCACATATAAGAACCCACTGTCCAGTTGGAGGTT TCCAATCGCACAGCTGAAATAGCAAAATACATAATGTGGAAAAAATCGAAT



consensusID : consensus_7097#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 767
fasta sequence
                              [AGCCCGTTGCGGCGAAGCGTCGGGCCGGCGATGGACGCGCTGGGCTCGCTCCCCCTCGACGTCCTCGACAACATCCTCTCCCGCCTCCACATCCACGACGTGGTCCGCACCTCCGCGCTGTCCCGAGCGTGGCGCCGCCGCTGGGAGTCGCTCCCCACCGTCGGCCTCCTCAACAGCCCCGGCATCGGCGCCTCCGACGTGGACGCCCTGCTCCTCCGCCGCACCGCGCCCGTCCGCTCCTTCCGCCTCGCCACGCGCGACCGCTCCTGGTCCCCCACCGCCTTCCACGACTGGCTCCTCCACCTCCACCTCCGCGGCGGCCTCCGGGACCTGGAGCTGACCCTCCGGTACGAGTTCATGTACCAGAAGCTCAACTCCTGCCTCTTCTCCTTCCGCGAGCTCACCTCCCTCAAGCTCTACTGCTGCGGTCTCCCCAACTTGCCCGCTGAGTTCGCCGGGTTCCCGAATCTGAAGACGCTGCACTTCTCTATGGTCCAAGCTCAGAGTCCCGGGGGAAGGGGGATAGCCACCCTGATTGCCGCATCGCCGGTGCTCCAGGAGGCGAGTCTCATCGACGGAAAGCTCATCGGAGATGGACCCGACGAAGATTGGGTGATTCGGGGGTCCAATCTCCGGAAACTGACCATAGCTCTTGGCCATAAATATGGTGGACGGATCGAAGACATCGCACGGCTGGAGGAATGTTGTCTCTTTGGCTCACATTACGCCAAATACTTGATGCGGATGGCGCATGTCACCAAGCTCAG]

[+] EMBL CB682130             [AGCCCGTTGCGGCGAAGCGTCGGGCCGGCGATGGACGCGCTGGGCTCGCTCCCCCTCGACGTCCTCGACAACATCCTCTCCCGCCTCCACATCCACGACGTGGTCCGCACCTCCGCGCTGTCCCGAGCGTGGCGCCGCCGCTGGGAGTCGCTCCCCACCGTCGGCCTCCTCAACAGCCCCGGCATCGGCGCCTCCGACGTGGACGCCCTGCTCCTCCGCCGCACCGCGCCCGTCCGCTCCTTCCGCCTCGCCACGCGCGACCGCTCCTGGTCCCCCACCGCCTTCCACGACTGGCTCCTCCACCTCCACCTCCGCGGCGGCCTCCGGGACCTGGAGCTGACCCTCCGGTACGAGTTCATGTACCAGAAGCTCAACTCCTGCCTCTTCTCCTTCCGCGAGCTCACCTCCCTCAAGCTCTACTGCTGCGGTCTCCCCAACTTGCCCGCTGAGTTCGCCGGGTTCCCGAATCTGAAGACGCTGCACTTCTCTATGGTCCAAGCTCAGAGTCCCGGGGGAAGGGGGATAGCCACCCTGATTGCCGCATCGCCGGTGCTCCAGGAGGCGAGTCTCATCGACGGAAAGCTCATCGGAGATGGACCCGACGAAGATTGGGTGATTCGGGGGTCCAATCTCCGGAAACTGACCATAGCTCTTGGCCATAAATATGGTGGACGGATCGAAGACATCGCACGGCTGGAGGAATGTTGTCTCTTTGGCTCACATTACGCCAAATACTTGATGCGGATGGCGCATGTCACCAAGCTCAG]


>consensus_7097#1 AGCCCGTTGCGGCGAAGCGTCGGGCCGGCGATGGACGCGCTGGGCTCGCTCCCCCTCGAC GTCCTCGACAACATCCTCTCCCGCCTCCACATCCACGACGTGGTCCGCACCTCCGCGCTG TCCCGAGCGTGGCGCCGCCGCTGGGAGTCGCTCCCCACCGTCGGCCTCCTCAACAGCCCC GGCATCGGCGCCTCCGACGTGGACGCCCTGCTCCTCCGCCGCACCGCGCCCGTCCGCTCC TTCCGCCTCGCCACGCGCGACCGCTCCTGGTCCCCCACCGCCTTCCACGACTGGCTCCTC CACCTCCACCTCCGCGGCGGCCTCCGGGACCTGGAGCTGACCCTCCGGTACGAGTTCATG TACCAGAAGCTCAACTCCTGCCTCTTCTCCTTCCGCGAGCTCACCTCCCTCAAGCTCTAC TGCTGCGGTCTCCCCAACTTGCCCGCTGAGTTCGCCGGGTTCCCGAATCTGAAGACGCTG CACTTCTCTATGGTCCAAGCTCAGAGTCCCGGGGGAAGGGGGATAGCCACCCTGATTGCC GCATCGCCGGTGCTCCAGGAGGCGAGTCTCATCGACGGAAAGCTCATCGGAGATGGACCC GACGAAGATTGGGTGATTCGGGGGTCCAATCTCCGGAAACTGACCATAGCTCTTGGCCAT AAATATGGTGGACGGATCGAAGACATCGCACGGCTGGAGGAATGTTGTCTCTTTGGCTCA CATTACGCCAAATACTTGATGCGGATGGCGCATGTCACCAAGCTCAG



consensusID : consensus_7097#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 695
fasta sequence
                              [TCTGTAGCTCAGCTGCAGCTGCTTCAGGAGCAGCTGCAAGAGCTGGAAAAGAGAAAGGATCAGCACCACAAGCCTACGGTGGAAGAATTGAAAGAGATTATCCAGGAGGGTAAAAAAAACGCAATTAAATTTCAAAATTACTTCGAATCTACCATCCAGTCTCTGTCTAAGCAACTCGACCTTAGCCAATTTAGGCTTCCCCCATTGCCAGAGTTCCCATTGGAGCTGTCATCTCATCCGGTCACCACCAGACCAGGAGACACTCCTGTCGATCCTGCTGACAATGTTGCTGCTAATGTACCTGAGGATTCTCGAGAAGGCCATGCTACTTCTGGTGATGCTGATGTTCATGTCCGTTCTCCAATAGACTTCGTTGCCAAATGTGTTGGGAATGGTTGTGCAGAATCTCCAGAAGACCAAATCTGACGAGAGTTTCATGATTCTAGCCATTTCTGTACTTCCTTTTGATGTGAAATTTTCAGTTCTTGACACCCCTCGATGGTGGAACTTAACAGCTAGGTTATGATCTGTTGATAAACATTGCATAGCCAATTTAGTCGGGTAAGGGAAGGCAGCGACAGTTTTTGGATGAACAAATACACAAATTCACGATGGTACTCTAGTTATAGATTGACAGCCTTTGGATGAACAAAGACTGCTTTTGGAATTGACATTTGGGTTCAAAAAAAAAAAAA]

[-] EMBL CA761802             [TCTGTAGCTCAGCTGCAGCTGCTTCAGGAGCAGCTGCAAGAGCTGGAAAAGAGAAAGGATCAGCACCACAAGCCTACGGTGGAAGAATTGAAAGAGATTATCCAGGAGGGTAAAAAAAACGCAATTAAATTTCAAAATTACTTCGAATCTACCATCCAGTCTCTGTCTAAGCAACTCGACCTTAGCCAATTTAGGCTTCCCCCATTGCCAGAGTTCCCATTGGAGCTGTCATCTCATCCGGTCACCACCAGACCAGGAGACACTCCTGTCGATCCTGCTGACAATGTTGCTGCTAATGTACCTGAGGATTCTCGAGAAGGCCATGCTACTTCTGGTGATGCTGATGTTCATGTCCGTTCTCCAATAGACTTCGTTGCCAAATGTGTTGGGAATGGTTGTGCAGAATCTCCAGAAGACCAAATCTGACGAGAGTTTCATGATTCTAGCCATTTCTGTACTTCCTTTTGATGTGAAATTTTCAGTTCTTGACACCCCTCGATGGTGGAACTTAACAGCTAGGTTATGATCTGTTGATAAACATTGCATAGCCAATTTAGTCGGGTAAGGGAAGGCAGCGACAGTTTTTGGATGAACAAATACACAAATTCACGATGGTACTCTAGTTATAGATTGACAGCCTTTGGATGAACAAAGACTGCTTTTGGAATTGACATTTGGGTTCAAAAAAAAAAAAA]


>consensus_7097#2 TCTGTAGCTCAGCTGCAGCTGCTTCAGGAGCAGCTGCAAGAGCTGGAAAAGAGAAAGGAT CAGCACCACAAGCCTACGGTGGAAGAATTGAAAGAGATTATCCAGGAGGGTAAAAAAAAC GCAATTAAATTTCAAAATTACTTCGAATCTACCATCCAGTCTCTGTCTAAGCAACTCGAC CTTAGCCAATTTAGGCTTCCCCCATTGCCAGAGTTCCCATTGGAGCTGTCATCTCATCCG GTCACCACCAGACCAGGAGACACTCCTGTCGATCCTGCTGACAATGTTGCTGCTAATGTA CCTGAGGATTCTCGAGAAGGCCATGCTACTTCTGGTGATGCTGATGTTCATGTCCGTTCT CCAATAGACTTCGTTGCCAAATGTGTTGGGAATGGTTGTGCAGAATCTCCAGAAGACCAA ATCTGACGAGAGTTTCATGATTCTAGCCATTTCTGTACTTCCTTTTGATGTGAAATTTTC AGTTCTTGACACCCCTCGATGGTGGAACTTAACAGCTAGGTTATGATCTGTTGATAAACA TTGCATAGCCAATTTAGTCGGGTAAGGGAAGGCAGCGACAGTTTTTGGATGAACAAATAC ACAAATTCACGATGGTACTCTAGTTATAGATTGACAGCCTTTGGATGAACAAAGACTGCT TTTGGAATTGACATTTGGGTTCAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7097#0      GAGCGCGGGGAACGGAACGGGACGGCAGATTCTGGGGAAGAAATGGCGGACGTGCAGTCG 60
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      CCGCCGCCGCCGCCGCCGCCGAGCGGCCAGCGGCGGCTCGTCGGGCCAGCGCCGGACGCC 120
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      CTGGGCTCGCTCCCCCTCGACGTCCTCGACAGCATCCTCTCCCGCCTCCACATCCACGAC 180
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      GTGGTCCGCACCTCCGCGCTGTCCCGATCGTGGCGCCGCCGCTGGGAGTCGCTCCCCACC 240
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      GTCGACCTCACGCGGAGCCCCGGCATCAGCGCCTCCGACGTGGACGCGCTGCTCCTCCGC 300
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      CGCACCGCGCCCGCCCGCTCCTTCCGCCTCGCCACGCGCGACCGCTCCTGGTCCCCTACC 360
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      GCCTTCCACGACTGGCTCCTCCGCCTCTCCCGCGGCGGTGGCGGCGGCGGCCTCCGCGAC 420
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      CTGGAGCTGACCCTCCGGTACACGTACATCAACAGCAAGCTCAACTCCTGCCTCTTCTCC 480
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      TTTCGCGAGCTCACCTCGCTGAGACTCCACTGCTGCGGCCTCCCGCACGTGCCCACTGAG 540
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      TTCGCCGGGTTCCCGAATCTGAAGACGATGTACCTCTCGGTGGTCAAAGTTCAGAGGCAC 600
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      GGGGGAAGGGGGTTGGCCACCCTGATTGCTGCATCGCCGGTGCTCCAGGAGGTGACTCTC 660
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      ATCGACGTAGTGCTCATTGGAGATGGACCCGACGAAGATTGGGTGATTCGGGCTTCCAAT 720
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      CTGCGGAAATTGACGATAGCTCTTGGCTCTGAATATGGTGGCCGGATGGAAGACCTTCCA 780
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      CGGCTGGAGGAATGTTGTCTCTTTGGCCTGAATTATGCCAAATACTTGACGGGGATGGCG 840
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      CGAGTCACCAAGCTCACTTTCTACTGCAATTGCATGTTGTCAACTGAAGTTGACGTGCTG 900
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      GAGCGATTGCCGTTCCTGTTTGAGAACCTTAGAAGCTTAATCCTTGGAGTGAATTTTTGT 960
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      ATGATGTCTCACATCTTGGCTATTTTCTGCCTACTTAGAAGTGCGCCTGTTCTTGAAGAA 1020
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      CTCGATGTTTGGAATTGGAGTGAGGGTGCCCAGGAAATGGAAGCAAATGATGTGTTCTTG 1080
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      AATGCTCAGTGGATCAATCATATGTTTGCCAAACTTCATGTTGTGCGCATGAAGAAGGTT 1140
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      TATTGCCTCAATAATGAGATGCACTTTATAGAGTTCATTCTGTCCAAGGCAAGAGTACTG 1200
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      CGAGTGCTTTCCCTCACTCTTGCGTCTGATTCCCTGAGCAGTATTGAGGAAGCAATTATT 1260
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      GATATAACAGAATATCCAAGAGCATCACCTGATGCGCAGGTCATCTTCATGGGTGTAGAG 1320
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      CCAGAATCTGCAAATAAGTAAACATTGTGATTCTGATTTCCTAGCCATGCTGTTCCATAC 1380
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      ATTCATCCAACTTCTCAGATGTTCTTTACTACACTTGACTTAAAAATTCCTTCCGGTTCA 1440
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      GTCTTTTCTGGACACCCTATGTGTTTTTAGTATTCTTCGCTGTTAATATTGTCTATAGTG 1500
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      TAAATTGTATTATACATCCCTAAACTTGCTTGAGTGCGAAATTACTCCCTGAACTTATAA 1560
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      GCATTTTTTTACTGCACATCCAATAACTCTTTTTTTCCTCAGTGATATGAATGGTTTCCT 1620
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      GGATTTATCCGCTGAGTTTCCTGACGTGGAGGAGGAAGAGACATCAGGCTTAGGATCGCT 1680
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      ------------------------------------------------------------
                                                                                  

consensus_7097#0      GGATACTGTACACCCTCGGAGAAGGCAGCGATCCAACGGGGAGTCTGTAGCTCAGCTGCA 1740
consensus_7097#2      -------------------------------------------TCTGTAGCTCAGCTGCA 17
consensus_7097#1      ---------------------------AGCCCGTTGCGGCGAAGCGTCGGGCCGGCGATG 33
                                                                  *    *  * **    

consensus_7097#0      GCTGCTTCAGGAGCAGCTGC-----AAGAGCTGGAAAAGGAGAAGGATCAGCACCACAAG 1795
consensus_7097#2      GCTGCTTCAGGAGCAGCTGC-----AAGAGCTGGAAAAGAGAAAGGATCAGCACCACAAG 72
consensus_7097#1      GACGCGCTGGGCTCGCTCCCCCTCGACGTCCTCGACAACATCCTCTCCCGCCTCCACATC 93
                      *  **    **  *     *     * *  ** ** **          *  * *****  

consensus_7097#0      CCTACGGTGGAAGAATTGAAAGAGATTATCCAGGAGGGTAAAAAAAACGCAATTAAATTT 1855
consensus_7097#2      CCTACGGTGGAAGAATTGAAAGAGATTATCCAGGAGGGTAAAAAAAACGCAATTAAATTT 132
consensus_7097#1      CACGACGTGGTCCGCACCTCCGCGCTGTCCC--GAGCGTGGCGCCGCCGC--TGGGAGTC 149
                      *     ****           * * *   **  *** **        ***  *   * * 

consensus_7097#0      CAAAATTACTTCGAATCTACCATCCAGTCTCTGTCTAAGCAACACGACCTTAGCCAATTT 1915
consensus_7097#2      CAAAATTACTTCGAATCTACCATCCAGTCTCTGTCTAAGCAACTCGACCTTAGCCAATTT 192
consensus_7097#1      GCTCCCCACCGTCGGCCTCCTCAACAGCCCCGGCATCGGCGCCTCCGACGTGGACGCCCT 209
                             **       ** *    *** * * *  *  **  * *   * * * *    *

consensus_7097#0      AGGCTTCCCCCATTGCCAGAGTTCCCATCGGAGCTG--TCATCTCATCCGGTCACCACCA 1973
consensus_7097#2      AGGCTTCCCCCATTGCCAGAGTTCCCATTGGAGCTG--TCATCTCATCCGGTCACCACCA 250
consensus_7097#1      GCTCCTCCGCCGCACCGCGCCCGTCCGCTCCTTCCGCCTCGCCACGCGCGACCGCTCCTG 269
                         * *** **    *  *     **       * *  **  * *   **  * *  *  

consensus_7097#0      GACCAGGAGACACTCCTGTCGATCCTGCTGACAATGTTGCTGCTAATGTA-CCTGAGGAT 2032
consensus_7097#2      GACCAGGAGACACTCCTGTCGATCCTGCTGACAATGTTGCTGCTAATGTA-CCTGAGGAT 309
consensus_7097#1      GTCCCCCACCGCCTTCCACGACTGGCTCCTCCACCTCCACCTCCGCGGCGGCCTCCGGGA 329
                      * **   *    ** *      *    *   **      *  *    *   ***  **  

consensus_7097#0      TCTCGAGAAGGCCATGCTACTTCTGGTGATG---CTGATGTTCATGTCCGTTCTCCAATA 2089
consensus_7097#2      TCTCGAGAAGGCCATGCTACTTCTGGTGATG---CTGATGTTCATGTCCGTTCTCCAATA 366
consensus_7097#1      CCTGGAGCTGACCCTCCGGTACGAGTTCATGTACCAGAAGCTCAACTCCTGCCTCTTCTC 389
                       ** ***  * ** * *       * * ***   * ** * ***  ***   ***   * 

consensus_7097#0      GACTT-CGTTGCCAAATGTGTTGGGAATGGTTG-TGCAGAATCTCCAGAAGACCAAATCT 2147
consensus_7097#2      GACTT-CGTTGCCAAATGTGTTGGGAATGGTTG-TGCAGAATCTCCAGAAGACCAAATCT 424
consensus_7097#1      CTTCCGCGAGCTCACCTCCCTCAAGCTCTACTGCTGCGGTCTCCCCAACTTGCCCGCTGA 449
                            **    **  *   *   *      ** *** *  ** ***     **   *  

consensus_7097#0      GA-CGAGAGTTTCATGATTCTAGCCATTTCTGTACTTCCTTTTGATGTGAAATTTTTAGT 2206
consensus_7097#2      GA-CGAGAGTTTCATGATTCTAGCCATTTCTGTACTTCCTTTTGATGTGAAATTTTCAGT 483
consensus_7097#1      GTTCGCCGGGTTCCCGAATCTGAAGACG-CTGCACTTCTCTATGGTCC-AAGCTCAGAGT 507
                      *  **   * ***  ** ***    *   *** *****  * ** *   **  *   ***

consensus_7097#0      TCTTGACACCCCTCGATGGTGGAACTTAACAGCTAGGTTAT-GATCTGTTGATAAACATT 2265
consensus_7097#2      TCTTGACACCCCTCGATGGTGGAACTTAACAGCTAGGTTAT-GATCTGTTGATAAACATT 542
consensus_7097#1      CCCGGGGGAAGGGGGATAGCC-ACCCTGATTGCCGCATCGCCGGTGCTCCAGGAGGCGAG 566
                       *  *         *** *   * * * *  **    *    * *        *  *   

consensus_7097#0      GCATAGCCAATTTAGTCGGGTAAGGGAAGGCAGCGACAGTTTTTGGATGAACAAATACAC 2325
consensus_7097#2      GCATAGCCAATTTAGTCGGGTAAGGGAAGGCAGCGACAGTTTTTGGATGAACAAATACAC 602
consensus_7097#1      TCTCATCGACGGAAAGCTCATCGGAGATGGACCCGACGAAGATTGGGTGATTCGGGGGTC 626
                       *  * * *    *  *   *  * ** **   ****     **** ***         *

consensus_7097#0      AAATTCACGATGGT--ACTCTAGTTATAGATTGACAGCCTT-TGGATGAA-CAAAGAC-- 2379
consensus_7097#2      AAATTCACGATGGT--ACTCTAGTTATAGATTGACAGCCTT-TGGATGAA-CAAAGAC-- 656
consensus_7097#1      CAATCTCCGGAAACTGACCATAGCTCTTGGCCATAAATATGGTGGACGGATCGAAGACAT 686
                       ***   **       **  *** * * *      *   *  **** * * * *****  

consensus_7097#0      --TGCTTTTGGAA-----TTGACATTTGGGTTCACACTGCAGTTTTCGCTTTCGGCACAT 2432
consensus_7097#2      --TGCTTTTGGAA-----TTGACATTTGGGTTCAAAAAAAAAAAAA-------------- 695
consensus_7097#1      CGCACGGCTGGAGGAATGTTGTCTCTTTGGCTCACATTACGCCAAATACTTGATGCGGAT 746
                          *   ****      *** *  ** ** *** *                        

consensus_7097#0      ATAAGAACCCACTGTCCAGTTGGAGGTTTCCAATCGCACAGCTGAAATAGCAAAATACAT 2492
consensus_7097#2      ------------------------------------------------------------
consensus_7097#1      GGCGCATGTCACCAAGCTCAG--------------------------------------- 767
                                                                                  

consensus_7097#0      AATGTGGAAAAAATCGAAT 2511
consensus_7097#2      -------------------
consensus_7097#1      -------------------
                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)