These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7103#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2293 fasta sequence [CTCAATTTCTTTGGACTTCCTCACTTCTAGCGTGCAAATTTAATAACTCCTCGGCTCCACTTCTTTCCCCCGTTTTCTTTCTTGTTTTCAGGCACCAAATCTCTGCTGTTTATATACTCGAGTGGTGTTTTTGGATGCAATTAGGCAGCATTCTGCGGCAAATTTAGCATATAGTTTTTTTTTTTTCTGTTCTGTTTTTGGCGATTGTTTTCTATCTGTGTGGAGTAGTAAGCATGTGAAAGGAGCTGAGAGGTTGAAGCAGCAGTTGGATTTGATGTTCTTGCCAAGACCCCGACATTTTCTCTTGATTCTTTAAGACTTTTTGGGGATCGATTCGATTACTGATGCACCTACCTCGCAGCTCCGAGCTTTGGATTCAAGAAACCCAAATCTGGTGCTGGAATCCGAGCTCCAGATTCAAGCCGGAGCAATTCGGGTAAAACCAGGCGAGAGATCTTTGCGCAAGAAGATGTCGCCGGCCACCGCCGCCGCCGACGACCTCCGCGCCGAGGAGGAGGGGAAGGGGGGGAGGAGCAGCAGCAGGCAAGAGGAGGCCAATGTCCTCCTCGCCGTCGATGCGGCGGAGGGCGGCGGCGCGTGGTCGCCGGTGGGGTGGTTCAGGATGCTGGGGAGGGAGCTGCACTGGAGCTTCGTGGCGGGCGTGGTGGCGACGTACGGCGCCAGCCAGGGGCTCGGCGGCGGCGTCATGCGGGTGGCGTCGGACTACTACTGGAAGGACGTGCAGCGGGTGCAGCCGTCGGCGGCGCAGGTGTACCAGGGGGTGACCTCCATCCCGTGGATGGTCAAGCCGCTCTGGGGCCTCCTCACCGACGTCCTCCCCATCGCCGGCTAACGCCGCCGCCCTTACTTCGTCATCGCAGGCTTCATGGGAGTAGTCGCGATGC-TTGTATTATCTCTCCACAGCAAGCTTCATGTATTGTTCGCGTTGTTGGCATTGATGGCCGGAAGTGCTAGTGTGGCAATAGCCGATGTAACTATAGATGCCTGTGTTGCTGAAAACAGTATAGTGCACCCTCATCTTGCTGCTGACATGATAAGCTTAAACGGATTCTGTGCATCTGTGGGAGGGCTTATTGGATTCTCAATAAGTGGTTTCCTTGTCCATGCAATAGGCTCTCAAGGTGCCCTTGGCATGTTGGCAATACCTTCTGCCCTGGTAATCCTAGCTGGAATGATGATAAAGGACGTCCATATGCCCAACTTTCCATATGAGCTGGCCCATATGAAGTTTGTAGAAGCAAGTAGAACAATGATGGCAACCTTAAAATGTCCTGAAGTATGGCGACCATGTGTTTACATGTACATGTCTCTTGCTTTGAGCGTGGACATACAAGAAGGAATGTTCTATTGGTACACAGATAGAAATGCAGGGCTATCTTTTTCAGAGGGATTAATTGGGTTTATCTTCGCAGTTGGGTCAGTTGGTTCTCTTATTGGGGTCATACTTTACCAAAATATTCTGAAGGACCATTCTTTTCGCAGCGTTCTCTGTTTAAGTCAGTTGTTGCTGAGCTTGTCAGGAATGCTTGACCTGATCTTGGTACTTCGTCTCAATCTAAAACTGGGGATACCTGACTACTACTTTGCTGTGATCGACGAGGGTGTCTCCAAAATGATCAACCGCATAAAATGGATGCCTCTTTTGGTACTTAGCTCAAAGCTTTGCCCTCCTGGCATTGAGGGCACATTCTATGCGTTGCTCATGTCCATCGACAATGTTGGCTTGCTATCTGGATCTTGGGCAGGTGGATTGATCCTTCATGTGTTGAACATCACAAGAACAGAGTTCA-AAAACCTCTGGGCCGCGATCCTAATCCGAAATGCAATGAGGTTACTACCTTTGGCCCTGTTGTTTTTGGTGCCGAGAAGTGACCAGAACTCTAATCTCCTTCCAGCTGACTTGCTACCTGAGGATGATGCTGCCCAATATCAAATGGACAATGTTGAGTTAACCTCTCTTACAGTGGATGGGAAATCGAGCACCGGTAGTTTGCACCAAGAATGCAAAAATCAGGACGTTGTCGAAAACGACGATGACGAGGCTTCACTGCTTGCCAACAGGAGTTGATAGGTTATATGCATGGATTCATTTCAGGACAAGATTGAAAATGATATATAGAAAAGGAGAAAATCACACCATTAGTTTTACGTTTTTTTGTTGTTTGTGCCATATTCATTCATTTTACGGCAGCACATTAGATACTCAACAGTTGTACTCAGAACATTTTCCTTTGACAAAAATCG--AATGCCCGAAATTTCGATCTAAAAAAAA] [+] EMBL AK073039 [CTCAATTTCTTTGGACTTCCTCACTTCTAGCGTGCAAATTTAATAACTCCTCGGCTCCACTTCTTTCCCCCGTTTTCTTTCTTGTTTTCAGGCACCAAATCTCTGCTGTTTATATACTCGAGTGGTGTTTTTGGATGCAATTAGGCAGCATTCTGCGGCAAATTTAGCATATAGTTTTTTTTTTTTCTGTTCTGTTTTTGGCGATTGTTTTCTATCTGTGTGGAGTAGTAAGCATGTGAAAGGAGCTGAGAGGTTGAAGCAGCAGTTGGATTTGATGTTCTTGCCAAGACCCCGACATTTTCTCTTGATTCTTTAAGACTTTTTGGGGATCGATTCGATTACTGATGCACCTACCTCGCAGCTCCGAGCTTTGGATTCAAGAAACCCAAATCTGGTGCTGGAATCCGAGCTCCAGATTCAAGCCGGAGCAATTCGGGTAAAACCAGGCGAGAGATCTTTGCGCAAGAAGATGTCGCCGGCCACCGCCGCCGCCGACGACCTCCGCGCCGAGGAGGAGGGGAAGGGGGGGAGGAGCAGCAGCAGGCAAGAGGAGGCCAATGTCCTCCTCGCCGTCGATGCGGCGGAGGGCGGCGGCGCGTGGTCGCCGGTGGGGTGGTTCAGGATGCTGGGGAGGGAGCTGCACTGGAGCTTCGTGGCGGGCGTGGTGGCGACGTACGGCGCCAGCCAGGGGCTCGGCGGCGGCGTCATGCGGGTGGCGTCGGACTACTACTGGAAGGACGTGCAGCGGGTGCAGCCGTCGGCGGCGCAGGTGTACCAGGGGGTGACCTCCATCCCGTGGATGGTCAAGCCGCTCTGGGGCCTCCTCACCGACGTCCTCCCCATCGCCGGCTACCGCCGCCGCCCTTACTTCGTCATCGCAGGCTTCATGGGAGTAGTCGCGATGC TTGTATTATCTCTCCACAGCAAGCTTCATGTATTGTTCGCGTTGTTGGCATTGATGGCCGGAAGTGCTAGTGTGGCAATAGCCGATGTAACTATAGATGCCTGTGTTGCTGAAAACAGTATAGTGCACCCTCATCTTGCTGCTGACATGATAAGCTTAAACGGATTCTGTGCATCTGTGGGAGGGCTTATTGGATTCTCAATAAGTGGTTTCCTTGTCCATGCAATAGGCTCTCAAGGTGCCCTTGGCATGTTGGCAATACCTTCTGCCCTGGTAATCCTAGCTGGAATGATGATAAAGGACGTCCATATGCCCAACTTTCCATATGAGCTGGCCCATATGAAGTTTGTAGAAGCAAGTAGAACAATGATGGCAACCTTAAAATGTCCTGAAGTATGGCGACCATGTGTTTACATGTACATGTCTCTTGCTTTGAGCGTGGACATACAAGAAGGAATGTTCTATTGGTACACAGATAGAAATGCAGGGCTATCTTTTTCAGAGGGATTAATTGGGTTTATCTTCGCAGTTGGGTCAGTTGGTTCTCTTATTGGGGTCATACTTTACCAAAATATTCTGAAGGACCATTCTTTTCGCAGCGTTCTCTGTTTAAGTCAGTTGTTGCTGAGCTTGTCAGGAATGCTTGACCTGATCTTGGTACTTCGTCTCAATCTAAAACTGGGGATACCTGACTACTACTTTGCTGTGATCGACGAGGGTGTCTCCAAAATGATCAACCGCATAAAATGGATGCCTCTTTTGGTACTTAGCTCAAAGCTTTGCCCTCCTGGCATTGAGGGCACATTCTATGCGTTGCTCATGTCCATCGACAATGTTGGCTTGCTATCTGGATCTTGGGCAGGTGGATTGATCCTTCATGTGTTGAACATCACAAGAACAGAGTTCA AAAACCTCTGGGCCGCGATCCTAATCCGAAATGCAATGAGGTTACTACCTTTGGCCCTGTTGTTTTTGGTGCCGAGAAGTGACCAGAACTCTAATCTCCTTCCAGCTGACTTGCTACCTGAGGATGATGCTGCCCAATATCAAATGGACAATGTTGAGTTAACCTCTCTTACAGTGGATGGGAAATCGAGCACCGGTAGTTTGCACCAAGAATGCAAAAATCAGGACGTTGTCGAAAACGACGATGACGAGGCTTCACTGCTTGCCAACAGGAGTTGATAGGTTATATGCATGGATTCATTTCAGGACAAGATTGAAAATGATATATAGAAAAGGAGAAAATCACACCATTAGTTTTACGTTTTTTTGTTGTTTGTGCCATATTCATTCATTTTACGGCAGCACATTAGATACTCAACAGTTGTACTCAGAACATTTTCCTTTGACAAAAATCG AATGCCCGAAATTT ] [+] EMBL AU063987 [ AGGAGGCCAATGTCCTCCTCGCCGTCGATGCGGCGGAGGGCGGCGGCGCGTGGTCGCCGGTGGGGTGGTTCAGGATGCTGGGGAGGGAGCTGCACTGGAGCTTCGTGGCGGGCGTGGTGGCGACGTACGGCG CAGCAGGGGGCTCGGCGGCGGCGTCATGCGGGTGGCGTCGGACTACTACTGGAAGGACGTGCAGCGGGTGCAGCCGTCGGCGGCGCAGGTGTACCAGGGGGTGACCTCCATCCCGTGGATGGTCAAGCCGCTCTGGGGCCTCCTCACCGACGTCCTCCCCATCGCCGGCTAACGCCGCCGCCCTTACTTCGTCATCGCAGGCTTCATGGGAGTAGTCGCGATGCTTTGTAATATCTCTCCACAGCAAGCTTCATGAATTGTTCGCGTTGTTGGAATTAATGGCC ] [+] EMBL AU063953 [ AGGAGGCCAATGTCCTCCTCGCCGTCGATGCGGCGGAGGGCGGCGGCGCGTGGTCGCCGGTGGGGTGGTTCAGGATGCTGGGGAGGGAGCTGCACTGGAGCTTCGTGGCGGGCGTGGTGGCGACGTACGGCGCCAG CAGGGGCTCGGCGGCGGCGTCATGCGGGTGGCGTCGGACTACTACTGGAAGGACGTGCAGCGGGTGCAGCCGTCGGCGGCGCAGGTGTACCAGGGGGTGACCTCCATCCCGTGGATGGTCAAGCCGCTCTGGGGCCTCCTCANCGACGTCCTCNCCATCGCCGGCTAANGCGGCCG CCTTANTTCGTCATCGCAAGCTTCATGGGAATAATCGCGATGC TTGTA ] [+] EMBL BI805624 [ GGGCAGGTGGATTGATCCTTCATGTGTTGAACATCACAAGAACAGAGTTCATAAAACCTCTGGGCCGCGATCCTAATCCGAAATGCAATGAGGTTACTACCTTTGGCCCTGTTGTTTTTGGTGCCGAGAAGTGACCAGAACTCTAATCTCCTTCCAGCTGACTTGCTACCTGAGGATGATGGTGCCCAATATCAAGTGGACAATGTTGAGTTAACCTCTCTTACAGTGGATGGGAAATCGAGCACCGGTAGTTTGCACCAAGAATTCAAAAATCAGGACGTTGTCGAAAACGACGATGACGAGGCTTCACTGCTTGCCAACAGTAGTTGATTGGTTATATACATGGATTCATTTCAGGACAAGATTGAAAATGATATATAGAAAAGGAGAAAACCACACCATTAGTTTTACGTTTTTTTGTTGTTTGTGTTATATTCATTCATTTTATGGCAGCACATTAGATACTCAACAGTTGTACTCAGAACATTTTCCTTTGAC AAAATCGAAAATGCCCGAAATTTCGATCTAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||