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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7115 cluster # 7115       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7115#0 length = 805 sequences # 4  

consensusID : consensus_7115#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 805
fasta sequence
                              [CCTTTTATTTTTTTAATCAAAACTGTGTCAGCACATCACAGGCAGTAATTGCAACTTATATTGTACATATTTTACAATCTATACTAAGACGGCCATGAAAAAAAAACAAATAGAAATCAAGGTTTACTTCTCCATGATCCAGAACCTATGAATTTGTAGCCAGTTCTGCAGATATGAGAGTTTAATATTCTTGCCAGCTTGTCAATAATTAGCATCAATCTACTTTAGCCACCAATAAAAGAAAAAGGGAAGTAGATCCACCTTTTAACCTTGATGAAGAGCATCAATATGTTCTTAGTACATGATATATAAAATAATGAACACCATGCATATCCCACGTAACTGTTAAAAATATATTTTCAACGGAATGAAACAGTTTCTAATTTTGTAAATCATGTTGAGTAATATGTAGCATCAGTATATATATAATAGCTTGAAATTACCTGGCTGGTGGTCGTAGAAGAATCAATGAAAACGTGTATCAAACCATAAATCCATGATTTACAAAATATGGAACAAACCATTAAAATGCTATCACAATATTTGGTTATCCTGTTAGTTAAGGTTCAATGCTTGCCTCTTATTGTGCTCTTTGCAATCCCAGAGAACGAAAATGGCTAGTGAGAAACTGCCAAATATATATATATACATAGATAACTGAATAACAGTTTATGCTTTTTACTTGGTGCAATAAAAAATAGAGTAGGGAATGATGTTTACCAGTACAATTAAATGATGATCATGTATACGGAGATAAAGATTAGACAACAAATAAGAATTCCCCAGGAACTACTAAAATAACTGA]

[+] EMBL CB650033             [CCTTTTATTTTTTTAATCAAAACTGTGTCAGCACATCACAGGCAGTAATTGCAACTTATATTGTACATATTTTACAATCTATACTAAGACGGCCATGAAAAAAAAACAAATAGAAATCAAGGTTTACTTCTCCATGATCCAGAACCTATGAATTTGTAGCCAGTTCTGCAGATATGAGAGTTTAATATTCTTGCCAGCTTGTCAATAATTAGCATCAATCTACTTTAGCCACCAATAAAAGAAAAAGGGAAGTAGATCCACCTTTTAACCTTGATGAAGAGCATCAATATGTTCTTAGTACATGATATATAAAATAATGAACACCATGCATATCCCACGTAACTGTTAAAAATATATTTTCAACGGAATGAAACAGTTTCTAATTTTGTAAATCATGTTGAGTAATATGTAGCATCAGTATATATATAATAGCTTGAAATTACCTGGCTGGTGGTCGTAGAAGAATCAATGAAAACGTGTATCAAACCATAAATCCATGATTTACAAAATATGGAACAAACCATTAAAATGCTATCACAATATTTGGTTATCCTGTTAGTTAAGGTTCAATGCTTGCCTCTTATTGTGCTCTTTGCAATCCCAGAGAACGAAAATGGCTAGTGAGAAACTGCCAAATATATATATATACATAGATAACTGAATAACAGTTTATGCATACTACTTGGTGCAATAAAAAATAGAGTAGGGAATGATGTTTACCAGTACAATTAAATGATGATCATGTATACGGAGATAAAGATTAGACAACAAATAAGAATTCCCCAGGAACTACTAAAATAACTGA]
[-] EMBL AK058701             [                                  ATCACAGGTAGTAATTGCAACTTATATTGTACATATTTTACAATCTATACTAAGACGGCCATGAAAAAAAAACAAATAGAAATCAAGGTTTACTTCTCCATGATCCAGAACCTATGAATTTGTAGCCAGTTCTGCAGATATGAGAGTTCAATATTCTTGCCAGCTTGTCAATAATTAGCATCAATCTACTTTAGCCACCAATAAAAGAAAAAGGGAAGTAGATCCACCTTTTAACCTTGATGAAGAGCATCAATATGTTCTTAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CF316911             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTTTTACTTGGTGCAATAAAAAATAGAGTAGGGAATGATGTTTACCAG                                                                                  ]
[+] EMBL CF316912             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  aTTTTTACTTGGTGCAATAAAAAATAGAGTAGGGAATGATGTTTACCA                                                                                   ]


>consensus_7115#0 CCTTTTATTTTTTTAATCAAAACTGTGTCAGCACATCACAGGCAGTAATTGCAACTTATA TTGTACATATTTTACAATCTATACTAAGACGGCCATGAAAAAAAAACAAATAGAAATCAA GGTTTACTTCTCCATGATCCAGAACCTATGAATTTGTAGCCAGTTCTGCAGATATGAGAG TTTAATATTCTTGCCAGCTTGTCAATAATTAGCATCAATCTACTTTAGCCACCAATAAAA GAAAAAGGGAAGTAGATCCACCTTTTAACCTTGATGAAGAGCATCAATATGTTCTTAGTA CATGATATATAAAATAATGAACACCATGCATATCCCACGTAACTGTTAAAAATATATTTT CAACGGAATGAAACAGTTTCTAATTTTGTAAATCATGTTGAGTAATATGTAGCATCAGTA TATATATAATAGCTTGAAATTACCTGGCTGGTGGTCGTAGAAGAATCAATGAAAACGTGT ATCAAACCATAAATCCATGATTTACAAAATATGGAACAAACCATTAAAATGCTATCACAA TATTTGGTTATCCTGTTAGTTAAGGTTCAATGCTTGCCTCTTATTGTGCTCTTTGCAATC CCAGAGAACGAAAATGGCTAGTGAGAAACTGCCAAATATATATATATACATAGATAACTG AATAACAGTTTATGCTTTTTACTTGGTGCAATAAAAAATAGAGTAGGGAATGATGTTTAC CAGTACAATTAAATGATGATCATGTATACGGAGATAAAGATTAGACAACAAATAAGAATT CCCCAGGAACTACTAAAATAACTGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)