Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7123 cluster # 7123       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7123#0 length = 1151 sequences # 4  

consensusID : consensus_7123#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1151
fasta sequence
                              [TCGACTCCGAAGCTCCCACTCCCAGGGTTTTAGCTAGGGTTCTGTGTCCCCCGCATCGCCGCCGCCGCCGCCGCGAGCCATGGCCGACGCCGCCGCCCCCGGAGAGGACGACGCCGCGTGGGAGCGCGCCATCGCGGCGGCCGTCAAGAACGCCCCCTTCTCCGCCCCCAAGACCCTAACCCTCGACGGCGCCGTCAAGTCCACCACCGGCCGCCTCCCTTCGCCGTCGCTCCTCGGCCGCTACCCGTCCCTCGAGGAGCTCTCCGTCGCCGGCGCCCGCCTCTCCTCGCTCGCGGGCCTCCCGCGCCTCCCGGCGCTCCGCCGCCTCTCCCTCCCCGACAACCGCCTCTCGGGGGCCGCCTCCCTCGCCGCCGTCGCCGAGTCCTGCGGCGCCACGCTCCGCCACCTCGACCTCGGGAACAACCGCTTCGCCGACGTCGCCGAGCTGGCGCCGCTCGCGCCGCACGGGGTCGAGTCGCTCGACCTGTACCAGTGCCCCGTCACCAAGGCCAAGGGGTACAGGGACAAGGTGTTCGCGCTGATCCCCAGCCTCAAGTTCTTGGACGGCATGGACGCCGAGGGCAACGACTGCTTGGATTCCGACGACGAGGAGGATGAAGAGGAGGATGAGGGAGAGGAGGGTGAAGGGGAAGGTGATGAAGAAGAAGAAGAGGAGGGTGGAGAGGAAGGGGAAGGTGATGAGGATGACGAAGAGGAAGGAGATGAAGAAGAGGATGAGGAAGAAGGTGAAGAGGAGGCTGAAGATGAAGAGGATGAAGCTGGTGCCGATGAAGAAGATGAAAGCAAAGTGGCGAATGGAAGCAAAGGGTCTTCAGGATCAGCTCAGCCAAACAAAAGGAAGAGGGACAGTGAAGATGATGCTAACGGAGACAAC-TGATCTGGTTGGGTCTGGAAATGGTTGCGGCTGGTCGTTGGAGGCTTTTCCTCCAATGTTCTTTGGAGGGCTTTGAGCCTTTTGAGGCGTTTCCTTCTGTTGATGTAGAAGATTTAGCTGTTCTTTTTAGATGCCAAGTTGCCAAAGGTTTTCTAATTATAATTCAGGACTTGGACATATCCTGATGTACTACTGCACATTT-CTGTGACTTT-CCGATGCTGCTAATTGAAATACTGGTTCT-GGGCCTNGTCATGCG]

[+] EMBL AK108369             [TCGACTCCGAAGCTCCCACTCCCAGGGTTTTAGCTAGGGTTCTGTGTCCCCCGCATCGCCGCCGCCGCCGCCGCGAGCCATGGCCGACGCCGCCGCCCCCGGAGAGGACGACGCCGCGTGGGAGCGCGCCATCGCGGCGGCCGTCAAGAACGCCCCCTTCTCCGCCCCCAAGACCCTAACCCTCGACGGCGCCGTCAAGTCCACCACCGGCCGCCTCCCTTCGCCGTCGCTCCTCGGCCGCTACCCGTCCCTCGAGGAGCTCTCCGTCGCCGGCGCCCGCCTCTCCTCGCTCGCGGGCCTCCCGCGCCTCCCGGCGCTCCGCCGCCTCTCCCTCCCCGACAACCGCCTCTCGGGGGCCGCCTCCCTCGCCGCCGTCGCCGAGTCCTGCGGCGCCACGCTCCGCCACCTCGACCTCGGGAACAACCGCTTCGCCGACGTCGCCGAGCTGGCGCCGCTCGCGCCGCACGGGGTCGAGTCGCTCGACCTGTACCAGTGCCCCGTCACCAAGGCCAAGGGGTACAGGGACAAGGTGTTCGCGCTGATCCCCAGCCTCAAGTTCTTGGACGGCATGGACGCCGAGGGCAACGACTGCTTGGATTCCGACGACGAGGAGGATGAAGAGGAGGATGAGGGAGAGGAGGGTGAAGGGGAAGGTGATGAAGAAGAAGAAGAGGAGGGTGGAGAGGAAGGGGAAGGTGATGAGGATGACGAAGAGGAAGGAGATGAAGAAGAGGATGAGGAAGAAGGTGAAGAGGAGGCTGAAGATGAAGAGGATGAAGCTGGTGCCGATGAAGAAGATGAAAGCAAAGTGGCGAATGGAAGCAAAGGGTCTTCAGGATCAGCTCAGCCAAACAAAAGGAAGAGGGACAGTGAAGATGATGCTAACGGAGACAAC TGATCTGGTTGGGTCTGGAAATGGTTGCGGCTGGTCGTTGGAGGCTTTTCCTCCAATGTTCTTTGGAGGGCTTTGAGCCTTTTGAGGCGTTTCCTTCTGTTGATGTAGAAGATTTAGCTGTTCTTTTTAGATGCCAAGTTGCCAAAGGTTTTCTAATTATAATTCAGGACTTGGACATATCCTGATGTACTACTGCACATTT CTGTGACTTT CCGATGCTGCTAATTGAAATACTGGTTCT GGGCCT         ]
[+] EMBL AU183341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAGGAGGGTGGAGAGGAAGGGGAAGGTGATGAGGATGACGAAGAGGAAGGAGATGAAGAAGAGGATGAGGAAGAAGGTGAAGAGGAGGCTGAAGATGAAGAGGATGAAGCTGGTGCCGATGAANAAGATGAAAGCAAAGTGGCGAATGGAAGCAAAGGGTCTTCAGGATCAGCTCANCCAAACAAAAGGAAGAGGGACAGTGAAGATGATGCTAACGGANACAAC TGATCTGGTTGGGTCTGG                                                                                                                                                                                                                                                 ]
[+] EMBL AU161977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAGGAAGAAGGTGAAGAGGAGGCTGAAGATGAAGAGGATGAAGCTGGTGCCGATGAAGAAGATGAAAGCAAAGTGGCGAATGGAAGCAAAGGGTCTTCAGGATCAGCTCAGCCAAACAAAAGGAAGAGGGACAGTNAAGATGATGCTAACGGAGACAAC TGATCTGGTTGGGTCTGGAAATGGTTGCGGCTGGTCGTTGGAGGCTTTTCCTCCAATGTTCTTTGGAGGGCTTTGAGCCTTTTNAGGCGTTTCCTTCTGTTGATGTAGAAGATTTAGCTGTTCTTTTTAGATGCCAAGTTGCCAAAGGTTTTCTAATTATAATTCAGGACTTTGACATATCCTGATGTACTACTGCACATTTCCTGTGACTTTNCCGATGCTGCTAATTGAAATACTGGTTCTGGGGCCTNGTCATGCG]
[+] EMBL OS1321668            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAGGAAGAAGGTGAAGAGGAGGCTGAAGATGAAGAGGATGAAGCTGGTGCCGATGAAGAAGATGAAAGCAAAGTGGCGAATGGAAGCAAAGGGTCTTCAGGATCAGCTCAGCCAAACAAAAGGAAGAGGGACAATGAAGATGATNCTAACGGAGACAACTTGATCTGGTTGGGTCTGGAAATGGTTGCGGCTGGTCNTTGGAGGCTTTTCCTCCAATGTTCTTTGGAGGGCTTTGAGCCTTTTGAGGCGTTTCCTTCTNTTGATGTAGAAGATTTAGCTGTTCTTTTTAGATGCCAAGTTNCC                                                                                                                    ]


>consensus_7123#0 TCGACTCCGAAGCTCCCACTCCCAGGGTTTTAGCTAGGGTTCTGTGTCCCCCGCATCGCC GCCGCCGCCGCCGCGAGCCATGGCCGACGCCGCCGCCCCCGGAGAGGACGACGCCGCGTG GGAGCGCGCCATCGCGGCGGCCGTCAAGAACGCCCCCTTCTCCGCCCCCAAGACCCTAAC CCTCGACGGCGCCGTCAAGTCCACCACCGGCCGCCTCCCTTCGCCGTCGCTCCTCGGCCG CTACCCGTCCCTCGAGGAGCTCTCCGTCGCCGGCGCCCGCCTCTCCTCGCTCGCGGGCCT CCCGCGCCTCCCGGCGCTCCGCCGCCTCTCCCTCCCCGACAACCGCCTCTCGGGGGCCGC CTCCCTCGCCGCCGTCGCCGAGTCCTGCGGCGCCACGCTCCGCCACCTCGACCTCGGGAA CAACCGCTTCGCCGACGTCGCCGAGCTGGCGCCGCTCGCGCCGCACGGGGTCGAGTCGCT CGACCTGTACCAGTGCCCCGTCACCAAGGCCAAGGGGTACAGGGACAAGGTGTTCGCGCT GATCCCCAGCCTCAAGTTCTTGGACGGCATGGACGCCGAGGGCAACGACTGCTTGGATTC CGACGACGAGGAGGATGAAGAGGAGGATGAGGGAGAGGAGGGTGAAGGGGAAGGTGATGA AGAAGAAGAAGAGGAGGGTGGAGAGGAAGGGGAAGGTGATGAGGATGACGAAGAGGAAGG AGATGAAGAAGAGGATGAGGAAGAAGGTGAAGAGGAGGCTGAAGATGAAGAGGATGAAGC TGGTGCCGATGAAGAAGATGAAAGCAAAGTGGCGAATGGAAGCAAAGGGTCTTCAGGATC AGCTCAGCCAAACAAAAGGAAGAGGGACAGTGAAGATGATGCTAACGGAGACAACTGATC TGGTTGGGTCTGGAAATGGTTGCGGCTGGTCGTTGGAGGCTTTTCCTCCAATGTTCTTTG GAGGGCTTTGAGCCTTTTGAGGCGTTTCCTTCTGTTGATGTAGAAGATTTAGCTGTTCTT TTTAGATGCCAAGTTGCCAAAGGTTTTCTAATTATAATTCAGGACTTGGACATATCCTGA TGTACTACTGCACATTTCTGTGACTTTCCGATGCTGCTAATTGAAATACTGGTTCTGGGC CTNGTCATGCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)