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Oryza sativa
cluster # 7145 cluster # 7145       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7145#0 length = 2767 sequences # 1  
consensus_7145#1 length = 628 sequences # 2  
consensus_7145#2 length = 612 sequences # 1  

consensusID : consensus_7145#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2767
fasta sequence
                              [AACCATCTCCATCTCCACCGCAGAAATTTCTCCCTCTACGCGCAAAGACCGTGCGAAGACTACGCCTCACCCTCTATATGCGCGACTCCACCGCTACCGCCGCCAGAGCCAAGTTCTTCTCCATCCGCCTCCGGAGTCGTGCTCCTCGCTCCTCCTCCTCGCGTGTACTGCTGCTGTGCTGGAGCCGTGGTCTTCCCCATACGACGTCATCTCCAGTCGCCGTCGGAGCCGAGGTCGTCCCCTTCCGTCTCCGCCACTATCGCACAGCACCGCTGCCCCCCCCCCCACCCCCCTGGAGACGAGTTCTTCTCCAGCTACCGCTGGAGCCGTGCTCCACGCTCCTCCTCGCGTGTATTGCTGCCGCCGCCGGAGCCCTGGTCTTCCCCAGTCCGTCGCCGGAGCCGAGGCCCCCCCCCCCCTCTTCCCCTGCCCTCGAAGCTGAGGTCTTCCCATCCGGCGACGCCACTGCAGTCCACCGCTGCGCTCAACGGAGCCGAGGCTGCAGCGTTGTGGCGCAGCGCCGTAGTGACGAGCAGACGCGGCAACCGGGCGACGAGGAGCGAGCAGCAGGAGGTGAGGGCGAGGAGCTAGCAGATCAGGCCATCCCTCCATGAAGGGCATCAGACGACGAGGGGCAAGCAGCAGCAGCTAGCAGAGCAAGCGGTCGAACCTACCCTCTATTTCTATCCTGTATTTGCCACTGACGCCCTTGGAACACCACTGCCCTGATTTCATCCACTCTTGGCTCCATTTGGAATCTGGCCATCGTCCTGCACCCTGCTTCCCATTTTCAAATCAACTTCAGCACCCACATTCTCCTGGAAGGTTTTTGTCCTGCTCAGGAAGGGGGTGTCGCCAAAGTGAATTCAAGACAGCTAGCATTCAATACTTTACACAAGATCCAGGAGCCACCAGCAATGCAAGTGGTTGTCTTACTGGTATGTTGTGATGATCCCAGAGTCCAAGGTTGGATGCTTCATATCATAAAGGAGTTGTCCATGTATTTAGGTACCATTTGTTAATATCATGACGGCCATGGTAAAGTTCATAATATGTCAATGTATATAGTTCATTCCCTATCGTTATTTTACTTTTCCTTTGAGCTGAAATATTGCCCATGGGGTTAGCTCATTTGTGTGGCATTGGTGGTATATTCTGATTGAAATTTATAATTGGTTGATGTACTAAAGAGCCAAAAAGCTACCCTAGACCTTTAACTGTTAACCTTGTATAGATTTGGAAATATATTGGCAAGGACTCATGTGACTTCACTATATCATGCTATTTATGTTGCTGATTAAAATTAAATTGAGGTGTATCACTGTGGCAATTAAGCTAAGAGTAATCAGATTCCTAATGTTTTGAGTTTACAACCTTTTTCCTTTCATCGTGAAGGCTGCAATTTATTTCAGTAAGATACAATGTTTCTGCTTTGAGGATCAAACCCTTCTTCCAATGCAAAGAAGAAAAAGGGAAATTCAGCCAATGTGCAGGTATAGCAGGAACAAATGTGTAAATATTAGATGCCTTGCCCATACAATCTCTTTGAGATGTAGCTGTTGGTACTTTCTTATGTTCCATGGTGCCAGTGGTATGTTCTGCAACTTGAGCAAACACGATTTTCCTTTTTTTTTCTTCTCTTCTTTCACAGTTGCTAATAGTCATTTTCTGCACAAAGTTTTAATTGCAGGCTACTCAAGAACCTAAGAAGTTCTGTCATGAAGCTGTTGTTTTTCTGGAGTCCCTTTTGGTAACATCTATTAGAGGACACTTGGGACCTCACCTATAAAAAACAAGTAAATTTTGACCATTGCTTCATATTAAGTGAATATCCTCTTTATATATACCAATGATCAATTTTGGAGCTCAGGAAAATGGAACCATGGCTTCATTTCCTTAAAAAGTGCATCGGTTGAATCCACAGTGTATATTCTGCAAGTTATAAGCAAGGATTTTGATGCTCCTTATTTCTTCCCTGAAAATTTCAAGTAAAGATGTGTTTTTTGGAATTTTGAATATTTGCATTGTGCTGATGACTTCTAATTACTAACGATGTAATTCATAAATTTTATCTATCAGCATATGCTTGCTTAGCCGGTTTGTTATTCTTTTTATTTGGATATACGTAGTTTGCTTGAAAAATTTGATGGGGCTAAAAGATTATTTGGTTTCTCAGGAAGATGCTTGATGCTAATGTCTTCTCGAGCTTTCAGATTGTAAGCTTCACAAGAAAAAGAGTGTGGCTGTGGACTCCAGGATTACATTGAATCTTGAAAAGGTATGCACTATTCCAATTTCAGATGATGCATTTCCCTGATTTGAGATGTTTCCTTTTTTCCAATCTAACAAAGGAAACCTTTCCTTGAGGGAATTCCATGAAATATATTGGTTTCCAGATTTCAAGATTGTTAGGTCATTTCGTGGCTGCCACTTCAACTGTAGGTGTGTGCATAGTTTAGCAATATGACCTCTTTAGATTAATATTGTGGTGAAGGAAAATATATAGGCGTTTTGACAACTGTTAGTGTTTCTGAAATGTTCACACTTGCTATCTACTTTTTACTTCAATTAAGGCAACTATGAACAATATTTTTTTTTGGAATTATGTGATGACCATTTCCTGCAAGTGAAATGGATGTAAATTTGTGTTTTGTAGACCACATGAACTTATGTGGACACACGGTAGGACCTGTAGGACCTATATACATCTCATTGGTGATCATGTAAATGCTATTTTTAATTGCTGGCCATGAGGGGTATATTTGAA]

[+] EMBL AK070592             [AACCATCTCCATCTCCACCGCAGAAATTTCTCCCTCTACGCGCAAAGACCGTGCGAAGACTACGCCTCACCCTCTATATGCGCGACTCCACCGCTACCGCCGCCAGAGCCAAGTTCTTCTCCATCCGCCTCCGGAGTCGTGCTCCTCGCTCCTCCTCCTCGCGTGTACTGCTGCTGTGCTGGAGCCGTGGTCTTCCCCATACGACGTCATCTCCAGTCGCCGTCGGAGCCGAGGTCGTCCCCTTCCGTCTCCGCCACTATCGCACAGCACCGCTGCCCCCCCCCCCACCCCCCTGGAGACGAGTTCTTCTCCAGCTACCGCTGGAGCCGTGCTCCACGCTCCTCCTCGCGTGTATTGCTGCCGCCGCCGGAGCCCTGGTCTTCCCCAGTCCGTCGCCGGAGCCGAGGCCCCCCCCCCCCTCTTCCCCTGCCCTCGAAGCTGAGGTCTTCCCATCCGGCGACGCCACTGCAGTCCACCGCTGCGCTCAACGGAGCCGAGGCTGCAGCGTTGTGGCGCAGCGCCGTAGTGACGAGCAGACGCGGCAACCGGGCGACGAGGAGCGAGCAGCAGGAGGTGAGGGCGAGGAGCTAGCAGATCAGGCCATCCCTCCATGAAGGGCATCAGACGACGAGGGGCAAGCAGCAGCAGCTAGCAGAGCAAGCGGTCGAACCTACCCTCTATTTCTATCCTGTATTTGCCACTGACGCCCTTGGAACACCACTGCCCTGATTTCATCCACTCTTGGCTCCATTTGGAATCTGGCCATCGTCCTGCACCCTGCTTCCCATTTTCAAATCAACTTCAGCACCCACATTCTCCTGGAAGGTTTTTGTCCTGCTCAGGAAGGGGGTGTCGCCAAAGTGAATTCAAGACAGCTAGCATTCAATACTTTACACAAGATCCAGGAGCCACCAGCAATGCAAGTGGTTGTCTTACTGGTATGTTGTGATGATCCCAGAGTCCAAGGTTGGATGCTTCATATCATAAAGGAGTTGTCCATGTATTTAGGTACCATTTGTTAATATCATGACGGCCATGGTAAAGTTCATAATATGTCAATGTATATAGTTCATTCCCTATCGTTATTTTACTTTTCCTTTGAGCTGAAATATTGCCCATGGGGTTAGCTCATTTGTGTGGCATTGGTGGTATATTCTGATTGAAATTTATAATTGGTTGATGTACTAAAGAGCCAAAAAGCTACCCTAGACCTTTAACTGTTAACCTTGTATAGATTTGGAAATATATTGGCAAGGACTCATGTGACTTCACTATATCATGCTATTTATGTTGCTGATTAAAATTAAATTGAGGTGTATCACTGTGGCAATTAAGCTAAGAGTAATCAGATTCCTAATGTTTTGAGTTTACAACCTTTTTCCTTTCATCGTGAAGGCTGCAATTTATTTCAGTAAGATACAATGTTTCTGCTTTGAGGATCAAACCCTTCTTCCAATGCAAAGAAGAAAAAGGGAAATTCAGCCAATGTGCAGGTATAGCAGGAACAAATGTGTAAATATTAGATGCCTTGCCCATACAATCTCTTTGAGATGTAGCTGTTGGTACTTTCTTATGTTCCATGGTGCCAGTGGTATGTTCTGCAACTTGAGCAAACACGATTTTCCTTTTTTTTTCTTCTCTTCTTTCACAGTTGCTAATAGTCATTTTCTGCACAAAGTTTTAATTGCAGGCTACTCAAGAACCTAAGAAGTTCTGTCATGAAGCTGTTGTTTTTCTGGAGTCCCTTTTGGTAACATCTATTAGAGGACACTTGGGACCTCACCTATAAAAAACAAGTAAATTTTGACCATTGCTTCATATTAAGTGAATATCCTCTTTATATATACCAATGATCAATTTTGGAGCTCAGGAAAATGGAACCATGGCTTCATTTCCTTAAAAAGTGCATCGGTTGAATCCACAGTGTATATTCTGCAAGTTATAAGCAAGGATTTTGATGCTCCTTATTTCTTCCCTGAAAATTTCAAGTAAAGATGTGTTTTTTGGAATTTTGAATATTTGCATTGTGCTGATGACTTCTAATTACTAACGATGTAATTCATAAATTTTATCTATCAGCATATGCTTGCTTAGCCGGTTTGTTATTCTTTTTATTTGGATATACGTAGTTTGCTTGAAAAATTTGATGGGGCTAAAAGATTATTTGGTTTCTCAGGAAGATGCTTGATGCTAATGTCTTCTCGAGCTTTCAGATTGTAAGCTTCACAAGAAAAAGAGTGTGGCTGTGGACTCCAGGATTACATTGAATCTTGAAAAGGTATGCACTATTCCAATTTCAGATGATGCATTTCCCTGATTTGAGATGTTTCCTTTTTTCCAATCTAACAAAGGAAACCTTTCCTTGAGGGAATTCCATGAAATATATTGGTTTCCAGATTTCAAGATTGTTAGGTCATTTCGTGGCTGCCACTTCAACTGTAGGTGTGTGCATAGTTTAGCAATATGACCTCTTTAGATTAATATTGTGGTGAAGGAAAATATATAGGCGTTTTGACAACTGTTAGTGTTTCTGAAATGTTCACACTTGCTATCTACTTTTTACTTCAATTAAGGCAACTATGAACAATATTTTTTTTTGGAATTATGTGATGACCATTTCCTGCAAGTGAAATGGATGTAAATTTGTGTTTTGTAGACCACATGAACTTATGTGGACACACGGTAGGACCTGTAGGACCTATATACATCTCATTGGTGATCATGTAAATGCTATTTTTAATTGCTGGCCATGAGGGGTATATTTGAA]


>consensus_7145#0 AACCATCTCCATCTCCACCGCAGAAATTTCTCCCTCTACGCGCAAAGACCGTGCGAAGAC TACGCCTCACCCTCTATATGCGCGACTCCACCGCTACCGCCGCCAGAGCCAAGTTCTTCT CCATCCGCCTCCGGAGTCGTGCTCCTCGCTCCTCCTCCTCGCGTGTACTGCTGCTGTGCT GGAGCCGTGGTCTTCCCCATACGACGTCATCTCCAGTCGCCGTCGGAGCCGAGGTCGTCC CCTTCCGTCTCCGCCACTATCGCACAGCACCGCTGCCCCCCCCCCCACCCCCCTGGAGAC GAGTTCTTCTCCAGCTACCGCTGGAGCCGTGCTCCACGCTCCTCCTCGCGTGTATTGCTG CCGCCGCCGGAGCCCTGGTCTTCCCCAGTCCGTCGCCGGAGCCGAGGCCCCCCCCCCCCT CTTCCCCTGCCCTCGAAGCTGAGGTCTTCCCATCCGGCGACGCCACTGCAGTCCACCGCT GCGCTCAACGGAGCCGAGGCTGCAGCGTTGTGGCGCAGCGCCGTAGTGACGAGCAGACGC GGCAACCGGGCGACGAGGAGCGAGCAGCAGGAGGTGAGGGCGAGGAGCTAGCAGATCAGG CCATCCCTCCATGAAGGGCATCAGACGACGAGGGGCAAGCAGCAGCAGCTAGCAGAGCAA GCGGTCGAACCTACCCTCTATTTCTATCCTGTATTTGCCACTGACGCCCTTGGAACACCA CTGCCCTGATTTCATCCACTCTTGGCTCCATTTGGAATCTGGCCATCGTCCTGCACCCTG CTTCCCATTTTCAAATCAACTTCAGCACCCACATTCTCCTGGAAGGTTTTTGTCCTGCTC AGGAAGGGGGTGTCGCCAAAGTGAATTCAAGACAGCTAGCATTCAATACTTTACACAAGA TCCAGGAGCCACCAGCAATGCAAGTGGTTGTCTTACTGGTATGTTGTGATGATCCCAGAG TCCAAGGTTGGATGCTTCATATCATAAAGGAGTTGTCCATGTATTTAGGTACCATTTGTT AATATCATGACGGCCATGGTAAAGTTCATAATATGTCAATGTATATAGTTCATTCCCTAT CGTTATTTTACTTTTCCTTTGAGCTGAAATATTGCCCATGGGGTTAGCTCATTTGTGTGG CATTGGTGGTATATTCTGATTGAAATTTATAATTGGTTGATGTACTAAAGAGCCAAAAAG CTACCCTAGACCTTTAACTGTTAACCTTGTATAGATTTGGAAATATATTGGCAAGGACTC ATGTGACTTCACTATATCATGCTATTTATGTTGCTGATTAAAATTAAATTGAGGTGTATC ACTGTGGCAATTAAGCTAAGAGTAATCAGATTCCTAATGTTTTGAGTTTACAACCTTTTT CCTTTCATCGTGAAGGCTGCAATTTATTTCAGTAAGATACAATGTTTCTGCTTTGAGGAT CAAACCCTTCTTCCAATGCAAAGAAGAAAAAGGGAAATTCAGCCAATGTGCAGGTATAGC AGGAACAAATGTGTAAATATTAGATGCCTTGCCCATACAATCTCTTTGAGATGTAGCTGT TGGTACTTTCTTATGTTCCATGGTGCCAGTGGTATGTTCTGCAACTTGAGCAAACACGAT TTTCCTTTTTTTTTCTTCTCTTCTTTCACAGTTGCTAATAGTCATTTTCTGCACAAAGTT TTAATTGCAGGCTACTCAAGAACCTAAGAAGTTCTGTCATGAAGCTGTTGTTTTTCTGGA GTCCCTTTTGGTAACATCTATTAGAGGACACTTGGGACCTCACCTATAAAAAACAAGTAA ATTTTGACCATTGCTTCATATTAAGTGAATATCCTCTTTATATATACCAATGATCAATTT TGGAGCTCAGGAAAATGGAACCATGGCTTCATTTCCTTAAAAAGTGCATCGGTTGAATCC ACAGTGTATATTCTGCAAGTTATAAGCAAGGATTTTGATGCTCCTTATTTCTTCCCTGAA AATTTCAAGTAAAGATGTGTTTTTTGGAATTTTGAATATTTGCATTGTGCTGATGACTTC TAATTACTAACGATGTAATTCATAAATTTTATCTATCAGCATATGCTTGCTTAGCCGGTT TGTTATTCTTTTTATTTGGATATACGTAGTTTGCTTGAAAAATTTGATGGGGCTAAAAGA TTATTTGGTTTCTCAGGAAGATGCTTGATGCTAATGTCTTCTCGAGCTTTCAGATTGTAA GCTTCACAAGAAAAAGAGTGTGGCTGTGGACTCCAGGATTACATTGAATCTTGAAAAGGT ATGCACTATTCCAATTTCAGATGATGCATTTCCCTGATTTGAGATGTTTCCTTTTTTCCA ATCTAACAAAGGAAACCTTTCCTTGAGGGAATTCCATGAAATATATTGGTTTCCAGATTT CAAGATTGTTAGGTCATTTCGTGGCTGCCACTTCAACTGTAGGTGTGTGCATAGTTTAGC AATATGACCTCTTTAGATTAATATTGTGGTGAAGGAAAATATATAGGCGTTTTGACAACT GTTAGTGTTTCTGAAATGTTCACACTTGCTATCTACTTTTTACTTCAATTAAGGCAACTA TGAACAATATTTTTTTTTGGAATTATGTGATGACCATTTCCTGCAAGTGAAATGGATGTA AATTTGTGTTTTGTAGACCACATGAACTTATGTGGACACACGGTAGGACCTGTAGGACCT ATATACATCTCATTGGTGATCATGTAAATGCTATTTTTAATTGCTGGCCATGAGGGGTAT ATTTGAA



consensusID : consensus_7145#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 628
fasta sequence
                              [TGGCGCAGCGCCGTAGTGACGAGCAGACGCGGCAACCGGGCGACGAGGAGCGAGCAGCAGGAGGTGAGGGCGAGGAGCTAGCAGATCAGGCCATCCCTCCATGAAGGGCATCAGACGACGAGGGGCAAGCAGCAGCAGCTAGCAGAGCAAGCGGTCGAACCTACCCTCTATTTCTATCCTGTATTTGCCACTGACGCCCTTGGAACACCACTGCCCTGATTTCATCCACTCTTGGCTCCATTTGGAATCTGGCCATCGTCCTGCACCCTGCTTCCCATTTTCAAATCAACTTCAGCACCCACATTCTCCTGGAAGGTTTTTGTCCTGCTCAGGAAGGGGGTGTCGCCAAAGTGAATTCAAGACAGCTAGCATTCAATACTTTACACAAGATCCAGGAGCCACCAGCAATGCAAGTGGTTGTCTTACTGGTACTGTACATTTTCTTCAATAGAATATAGTTGAAATGTAGATNTGGGGGTTCTGGTATTAATGTTCTGTGATCAGTATTTGCAATGTATTGGAGTTGAAAGATGCACCTTCTGTTGTAGCAGGAGTAAAAAAATGCTGGAATGTAAGTGAATGTTACATGTACATATGTGCAAACAATCATGACCATTACTAACTTATT]

[+] EMBL CF306255             [TGGCGCAGCGCCGTAGTGACGAGCAGACGCGGCAACCGGGCGACGAGGAGCGAGCAGCAGGAGGTGAGGGCGAGGAGCTAGCAGATCAGGCCATCCCTCCATGAAGGGCATCAGACGACGAGGGGCAAGCAGCAGCAGCTAGCAGAGCAAGCGGTCGAACCTACCCTCTATTTCTATCCTGTATTTGCCACTGACGCCCTTGGAACACCACTGCCCTGATTTCATCCACTCTTGGCTCCATTTGGAATCTGGCCATCGTCCTGCACCCTGCTTCCCATTTTCAAATCAACTTCAGCACCCACATTCTCCTGGAAGGTTTTTGTCCTGCTCAGGAAGGGGGTGTCGCCAAAGTGAATTCAAGACAGCTAGCATTCAATACTTTACACAAGATCCAGGAGCCACCAGCAATGCAAGTGGTTGTCTTACTGGTACTGTACATTTTCTTCAATAGAATATAGTTGAAATGTAGATNTGGGGGTTCTGGTATTAATGTTCTGTGATCAGTATTTGCAATGTATTGGAGTTGAAAGATGCACCTTCTGTTGTAGCAGGAGTAAAAAAATGCTGGAATGTAAGTGAATGTTACATGTACATATGTGCAAACAATCATGACCATTACTAACTTATT]
[+] EMBL CF306253             [TGGCGCAGCGCCGTAGTGACGAGCAGACGCGGCAACCGGGCGACGAGGAGCGAGCAGCAGGAGGTGAGGGCGAGGAGCTAGCAGATCAGGCCATCCCTCCATGAAGGGCATCAGACGACGAGGGGCAAGCAGCAGCAGCTAGCAGAGCAAGCGGTCGAACCTACCCTCTATTTCTATCCTGTATTTGCCACTGACGCCCTTGGAACACCACTGCCCTGATTTCATCCACTCTTGGCTCCATTTGGAATCTGGCCATCGTCCTGCACCCTGCTTCCCATTTTCAAATCAACTTCAGCACCCACATTCTCCTGGAAGGTT                                                                                                                                                                                                                                                                                                                      ]


>consensus_7145#1 TGGCGCAGCGCCGTAGTGACGAGCAGACGCGGCAACCGGGCGACGAGGAGCGAGCAGCAG GAGGTGAGGGCGAGGAGCTAGCAGATCAGGCCATCCCTCCATGAAGGGCATCAGACGACG AGGGGCAAGCAGCAGCAGCTAGCAGAGCAAGCGGTCGAACCTACCCTCTATTTCTATCCT GTATTTGCCACTGACGCCCTTGGAACACCACTGCCCTGATTTCATCCACTCTTGGCTCCA TTTGGAATCTGGCCATCGTCCTGCACCCTGCTTCCCATTTTCAAATCAACTTCAGCACCC ACATTCTCCTGGAAGGTTTTTGTCCTGCTCAGGAAGGGGGTGTCGCCAAAGTGAATTCAA GACAGCTAGCATTCAATACTTTACACAAGATCCAGGAGCCACCAGCAATGCAAGTGGTTG TCTTACTGGTACTGTACATTTTCTTCAATAGAATATAGTTGAAATGTAGATNTGGGGGTT CTGGTATTAATGTTCTGTGATCAGTATTTGCAATGTATTGGAGTTGAAAGATGCACCTTC TGTTGTAGCAGGAGTAAAAAAATGCTGGAATGTAAGTGAATGTTACATGTACATATGTGC AAACAATCATGACCATTACTAACTTATT



consensusID : consensus_7145#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 612
fasta sequence
                              [TCAGGAAAATGGAACCATGGCTTCATTTCCACTTAAAAAAGTGCATCAGCTTGAATCCACAAGTGTATATTCTGCATAGTTATAACAAGGATTTTGATGCTCCTTATTTCTTCCCTGATAATTTCAAGTAAAGATGTTTTTTTGGAATTTTGAATATTTGCACTTGTGCTGATGACTTCTAAATTACTAACGATGTAATTCATAAATTTTTATCTNATCACGCATATGCTTGCTTACCGTTTTGTTATTCTTTTTCACTTTTGGATATACGTAGTTTGCTTGAAAAATTTGATGTGGCTAAAAGATTATTTGGTTTCTCAGGAAGATGCTTGATGCTAATGTCTTCTGCGAGCTTTCAGATTGGTAAGCTTCACAAGAAAAAGAGTGTGCCTGTGGACTCCCAGGATGTACCTTGGAATCTTGAAAAGATTTCAAGATTGTTAGGTCACTTTCGTGGCTCCACTTCAACTGTAGGTGTGTGCATAGTTTACAATANGACCTCTTTAGATTAATATTGTGGTGAAGGAAAATATATAGGCGTTTTGACAACTGTTAGTGTTTCTGAAATGTTCACACCTTGCTATCTACTTTTTACTTCATTAAGGCAAAAAA]

[+] EMBL BM038130             [TCAGGAAAATGGAACCATGGCTTCATTTCCACTTAAAAAAGTGCATCAGCTTGAATCCACAAGTGTATATTCTGCATAGTTATAACAAGGATTTTGATGCTCCTTATTTCTTCCCTGATAATTTCAAGTAAAGATGTTTTTTTGGAATTTTGAATATTTGCACTTGTGCTGATGACTTCTAAATTACTAACGATGTAATTCATAAATTTTTATCTNATCACGCATATGCTTGCTTACCGTTTTGTTATTCTTTTTCACTTTTGGATATACGTAGTTTGCTTGAAAAATTTGATGTGGCTAAAAGATTATTTGGTTTCTCAGGAAGATGCTTGATGCTAATGTCTTCTGCGAGCTTTCAGATTGGTAAGCTTCACAAGAAAAAGAGTGTGCCTGTGGACTCCCAGGATGTACCTTGGAATCTTGAAAAGATTTCAAGATTGTTAGGTCACTTTCGTGGCTCCACTTCAACTGTAGGTGTGTGCATAGTTTACAATANGACCTCTTTAGATTAATATTGTGGTGAAGGAAAATATATAGGCGTTTTGACAACTGTTAGTGTTTCTGAAATGTTCACACCTTGCTATCTACTTTTTACTTCATTAAGGCAAAAAA]


>consensus_7145#2 TCAGGAAAATGGAACCATGGCTTCATTTCCACTTAAAAAAGTGCATCAGCTTGAATCCAC AAGTGTATATTCTGCATAGTTATAACAAGGATTTTGATGCTCCTTATTTCTTCCCTGATA ATTTCAAGTAAAGATGTTTTTTTGGAATTTTGAATATTTGCACTTGTGCTGATGACTTCT AAATTACTAACGATGTAATTCATAAATTTTTATCTNATCACGCATATGCTTGCTTACCGT TTTGTTATTCTTTTTCACTTTTGGATATACGTAGTTTGCTTGAAAAATTTGATGTGGCTA AAAGATTATTTGGTTTCTCAGGAAGATGCTTGATGCTAATGTCTTCTGCGAGCTTTCAGA TTGGTAAGCTTCACAAGAAAAAGAGTGTGCCTGTGGACTCCCAGGATGTACCTTGGAATC TTGAAAAGATTTCAAGATTGTTAGGTCACTTTCGTGGCTCCACTTCAACTGTAGGTGTGT GCATAGTTTACAATANGACCTCTTTAGATTAATATTGTGGTGAAGGAAAATATATAGGCG TTTTGACAACTGTTAGTGTTTCTGAAATGTTCACACCTTGCTATCTACTTTTTACTTCAT TAAGGCAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7145#0      AACCATCTCCATCTCCACCGCAGAAATTTCTCCCTCTACGCGCAAAGACCGTGCGAAGAC 60
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      TACGCCTCACCCTCTATATGCGCGACTCCACCGCTACCGCCGCCAGAGCCAAGTTCTTCT 120
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CCATCCGCCTCCGGAGTCGTGCTCCTCGCTCCTCCTCCTCGCGTGTACTGCTGCTGTGCT 180
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      GGAGCCGTGGTCTTCCCCATACGACGTCATCTCCAGTCGCCGTCGGAGCCGAGGTCGTCC 240
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CCTTCCGTCTCCGCCACTATCGCACAGCACCGCTGCCCCCCCCCCCACCCCCCTGGAGAC 300
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      GAGTTCTTCTCCAGCTACCGCTGGAGCCGTGCTCCACGCTCCTCCTCGCGTGTATTGCTG 360
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CCGCCGCCGGAGCCCTGGTCTTCCCCAGTCCGTCGCCGGAGCCGAGGCCCCCCCCCCCCT 420
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CTTCCCCTGCCCTCGAAGCTGAGGTCTTCCCATCCGGCGACGCCACTGCAGTCCACCGCT 480
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      GCGCTCAACGGAGCCGAGGCTGCAGCGTTGTGGCGCAGCGCCGTAGTGACGAGCAGACGC 540
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      GGCAACCGGGCGACGAGGAGCGAGCAGCAGGAGGTGAGGGCGAGGAGCTAGCAGATCAGG 600
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CCATCCCTCCATGAAGGGCATCAGACGACGAGGGGCAAGCAGCAGCAGCTAGCAGAGCAA 660
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      GCGGTCGAACCTACCCTCTATTTCTATCCTGTATTTGCCACTGACGCCCTTGGAACACCA 720
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CTGCCCTGATTTCATCCACTCTTGGCTCCATTTGGAATCTGGCCATCGTCCTGCACCCTG 780
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CTTCCCATTTTCAAATCAACTTCAGCACCCACATTCTCCTGGAAGGTTTTTGTCCTGCTC 840
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      AGGAAGGGGGTGTCGCCAAAGTGAATTCAAGACAGCTAGCATTCAATACTTTACACAAGA 900
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      TCCAGGAGCCACCAGCAATGCAAGTGGTTGTCTTACTGGTATGTTGTGATGATCCCAGAG 960
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      TCCAAGGTTGGATGCTTCATATCATAAAGGAGTTGTCCATGTATTTAGGTACCATTTGTT 1020
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      AATATCATGACGGCCATGGTAAAGTTCATAATATGTCAATGTATATAGTTCATTCCCTAT 1080
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CGTTATTTTACTTTTCCTTTGAGCTGAAATATTGCCCATGGGGTTAGCTCATTTGTGTGG 1140
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CATTGGTGGTATATTCTGATTGAAATTTATAATTGGTTGATGTACTAAAGAGCCAAAAAG 1200
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CTACCCTAGACCTTTAACTGTTAACCTTGTATAGATTTGGAAATATATTGGCAAGGACTC 1260
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      ATGTGACTTCACTATATCATGCTATTTATGTTGCTGATTAAAATTAAATTGAGGTGTATC 1320
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      ACTGTGGCAATTAAGCTAAGAGTAATCAGATTCCTAATGTTTTGAGTTTACAACCTTTTT 1380
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CCTTTCATCGTGAAGGCTGCAATTTATTTCAGTAAGATACAATGTTTCTGCTTTGAGGAT 1440
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      CAAACCCTTCTTCCAATGCAAAGAAGAAAAAGGGAAATTCAGCCAATGTGCAGGTATAGC 1500
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      AGGAACAAATGTGTAAATATTAGATGCCTTGCCCATACAATCTCTTTGAGATGTAGCTGT 1560
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      TGGTACTTTCTTATGTTCCATGGTGCCAGTGGTATGTTCTGCAACTTGAGCAAACACGAT 1620
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      TTTCCTTTTTTTTTCTTCTCTTCTTTCACAGTTGCTAATAGTCATTTTCTGCACAAAGTT 1680
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      TTAATTGCAGGCTACTCAAGAACCTAAGAAGTTCTGTCATGAAGCTGTTGTTTTTCTGGA 1740
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      GTCCCTTTTGGTAACATCTATTAGAGGACACTTGGGACCTCACCTATAAAAAACAAGTAA 1800
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      ATTTTGACCATTGCTTCATATTAAGTGAATATCCTCTTTATATATACCAATGATCAATTT 1860
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      TGGAGCTCAGGAAAATGGAACCATGGCTTCATTTCC---TTAAAAAGTGCATCGG-TTGA 1916
consensus_7145#2      ------TCAGGAAAATGGAACCATGGCTTCATTTCCACTTAAAAAAGTGCATCAGCTTGA 54
consensus_7145#1      ---------------TGGCGCAGCGCCGTAGTGAC-----GAGCAGACGCGGCAACCGGG 40
                                     ***  *   * * *  *  *      *  *   **  *     * 

consensus_7145#0      ATCCACA-GTGTATATTCTGCA--AGTTATAAGCAAGGATTTTGATGCTCC--TTATTTC 1971
consensus_7145#2      ATCCACAAGTGTATATTCTGCAT-AGTTATAA-CAAGGATTTTGATGCTCC--TTATTTC 110
consensus_7145#1      --CGACGAG-GAGCGAGCAGCAGGAGGTGAGGGCGAGGAGCTAGCAGATCAGGCCATCCC 97
                        * **  * *      * ***  ** *     * ****  * *  * **     **  *

consensus_7145#0      TTCCCTGAAAATTTCAAGTAAAGATGTGTTTTTTGGAATTTTGAATA---TTTGCA-TTG 2027
consensus_7145#2      TTCCCTGATAATTTCAAGTAAAGATGT-TTTTTTGGAATTTTGAATA---TTTGCACTTG 166
consensus_7145#1      TCCATGAAGGGCATCAGACGACGAGGGGCAAGCAGCAGCAGCTAGCAGAGCAAGCGGTCG 157
                      * *    *     ***    * ** *        * *      *  *      **  * *

consensus_7145#0      TGCTGATG----ACTTCTA------A-TTACTAACGATGTAATTCATAAATT------TT 2070
consensus_7145#2      TGCTGATG----ACTTCTA------AATTACTAACGATGTAATTCATAAATT------TT 210
consensus_7145#1      AACCTACCCTCTATTTCTATCCTGTATTTGCCACTGACGCCCTTGGAACACCACTGCCCT 217
                        *  *      * *****      * ** * *  ** *   **   * *         *

consensus_7145#0      -ATCTA-TCA-GCATATGCTTGCTTAGCCGGTTTGTTATTCTTTTTA-------TTTGGA 2120
consensus_7145#2      TATCTNATCACGCATATGCTTGCTTA-CCGTTTTGTTATTCTTTTTCACT----TTTGGA 265
consensus_7145#1      GATTTCATCCACTCTTGGCTCCATTTGGAATCTGGCCATCGTCCTGCACCCTGCTTCCCA 277
                       ** *  **     *  ***   **       * *  **  *  *         **   *

consensus_7145#0      TATACGTAGTTTGCTTGAAAAATTTGATGGGGCTAAAAGATTATTTGGTTTCTCAGGAAG 2180
consensus_7145#2      TATACGTAGTTTGCTTGAAAAATTTGATGTGGCTAAAAGATTATTTGGTTTCTCAGGAAG 325
consensus_7145#1      TTTTCA-AATCAACTTCAGCACCCACATTCTCCTGGAAGGTTTTTGTCCTGCTCAGGAAG 336
                      * * *  * *   *** *  *     **    **  *** ** **    * *********

consensus_7145#0      ATGCTTGATGCTAATGTCTTCT-CGAGCTTTCAGATTG-TAAGCTTCACAAGAAAAAGAG 2238
consensus_7145#2      ATGCTTGATGCTAATGTCTTCTGCGAGCTTTCAGATTGGTAAGCTTCACAAGAAAAAGAG 385
consensus_7145#1      G-GGGTGTCGCCAAAGTGAATTCAAGACAGCTAGCATTCAATACTTTACACAAGATCCAG 395
                        *  **  ** ** **    *     *    **  *   *  *** ***  * *   **

consensus_7145#0      TGTGGCTGTGGACTCCAGGATTACATTGAATCTTGAAAAGGTATGCACTATTCCAATTTC 2298
consensus_7145#2      TGTGCCTGTGGACTCCCAG----------------------------------------- 404
consensus_7145#1      GAGCCACCAGCAATGCAAGTG--------------------------------------- 416
                               * * * *  *                                         

consensus_7145#0      AGATGATGCATTTCCCTGATTTGAGATGTTTCCTTTTTTCCAATCTAACAAAGGAAACCT 2358
consensus_7145#2      ------------------------GATGT---------------------------ACCT 413
consensus_7145#1      ------------------------GTTGTCTTACTGGT------------------ACTG 434
                                              * ***                           **  

consensus_7145#0      TTCCTTGAGGGAATTCCATGAAATATATTGGTTTCCAGATTTCAAGATTGTTAGGTCA-T 2417
consensus_7145#2      T--------GGAAT--CTTGAAA-------------AGATTTCAAGATTGTTAGGTCACT 450
consensus_7145#1      T--------ACATTTTCTTCAAT-------------AGAATATAG--TTGAAATGTAGAT 471
                      *          * *  * * **              *** *  *   ***  * **   *

consensus_7145#0      TTCGTGGCTGCCACTTCAACTGTAGGTGTGTGCATAGTTTAGCAATATGACCTCTTT--- 2474
consensus_7145#2      TTCGTGGCT-CCACTTCAACTGTAGGTGTGTGCATAGTTTA-CAATANGACCTCTTT--- 505
consensus_7145#1      NTGGGGGTTCTGGTATTAATGTT--CTGTGATCAGTATTTG-CAATGTATTGGAGTTGAA 528
                       * * ** *      * **   *   ****  **   ***  ****         **   

consensus_7145#0      AGATTAATATTGTGGTGAAGGAAAATATATAGGCGTTTTGACAACTGTTAGTGTTTCTGA 2534
consensus_7145#2      AGATTAATATTGTGGTGAAGGAAAATATATAGGCGTTTTGACAACTGTTAGTGTTTCTGA 565
consensus_7145#1      AGATGCACCTTCTGTTGTAGCAGGA-GTAAAAAAATGCTG--GAATGTAAGTGAATGTTA 585
                      ****  *  ** ** ** ** *  *  ** *    *  **   * *** ****  * * *

consensus_7145#0      AATGTTCACAC-TTGCTATCTACTTTTTACTTCAATTAAGGCAACTATGAACAATATTTT 2593
consensus_7145#2      AATGTTCACACCTTGCTATCTACTTTTTACTTCA-TTAAGGCAAAAAA------------ 612
consensus_7145#1      CATGTACATAT-GTGCAAACAATCATGACCATTA-CTAACTTATT--------------- 628
                       **** ** *   *** * * *   *   * * *  ***   *                 

consensus_7145#0      TTTTTGGAATTATGTGATGACCATTTCCTGCAAGTGAAATGGATGTAAATTTGTGTTTTG 2653
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      TAGACCACATGAACTTATGTGGACACACGGTAGGACCTGTAGGACCTATATACATCTCAT 2713
consensus_7145#2      ------------------------------------------------------------
consensus_7145#1      ------------------------------------------------------------
                                                                                  

consensus_7145#0      TGGTGATCATGTAAATGCTATTTTTAATTGCTGGCCATGAGGGGTATATTTGAA 2767
consensus_7145#2      ------------------------------------------------------
consensus_7145#1      ------------------------------------------------------
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)