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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7147#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2628 fasta sequence
[TGTGCAGCCGCCGATCTCCTTCCAAAATCCGGTCTCCTCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGGAATCCTCTCAATCTCCTCTTCCTTTTCCCCAATAAATCCCCAAAAGTTTCTATGGAAATCCTTTCTAATTTCGCGGATCAATCTTTCCTTTTCCCGGGCGAGGATCCTAAACTTTCCCGGAGTTTTTCCCGTCGATTTGGGCCCGGACCCGAGCTCGCGTGCCTATATAAAGGACCCGCTAGTCGTCCTCTGCCTATCCCCTCAAGTCCCGTCCTTCGCCGAGCCCTAGCCGCCCCTGCCCGCGAGCTCCCTCTCTCTCCACCTCCGGCCGCCGCTCCAGCCGCCGTGCGCCGTCGCCTCGGCCGTCGCCGGTCAGCGCCGACACCTCCCTCGGCTACACAAAGTCGAGCTCTACCCCGGCCTCTGGTTGTTTTGCGCCAAATCCCACCGGAGGTTGCCCGTCGACGTGAAGTGGAGCACCGCCGTCGCCGCCGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCGTCGTCTCCACTGGATTCGCAGCTGCGAGGAGAACACCGTCCACCACCTCTTCTTCGCCAAAGATCGCCGGAACACCGTCGCCATCGTTGACCAGTACCACGTCGCCCTTCGGAGCTCATCGCTGGCCATCTCCTTCGCGGTCCGTCGTCGCGTAAGTGTTGAGTAGCATGTTGAAACCTGGAGAAGAAACTGTGATGAATGAAGTGGTCGACAAGATATTTCGGGCAATGCAGCAACTTCAGAGAGGTCAGTGTTGTTTTGTCACGTCAGCTTGCCGGACGTGGGAAATTTAACTATTTGCCACTCTTGTGACATGGCAATTAACGATTTGCCACGCTCTGTCAATGACACGTGGGCCCTCATGTGTCTATGACATGTGGGCCTAGTGGCAAATCGTTAAGGACCATTCGTAAGAGTGGCAAATAGTTAAAAGCCCCGCCGGACGTAGCTGAAAGATTCAGATTTTGAAAATAAGTTTTGGAGGGTTTATTTTTAAAATTAAATTTTAAAAAGATTAAAAAAATCATGTTTATCAGCTTTTTGCGGTGGTACTGATAACTAGCTGATGGACACTAGCGACATTGTTTTATAATATCCAAATAAAATGAAGAGAGAAACAGTCGCAAAAATACGATATTGCCCTTGCATGCCAAGTCCAGCTCGCATACAGCTCCGACACCACCACCACACCCGCCGCCGCACCCATTGTCACCGTCACCAATGAGGTGGCTCTTCCGGGGGGTTTGAGGGTGGCCCACGCCGCCACGCGCCTGGGCTCGTGGCTCCGTGTCATTCCCGCACTCGTCGCTGCTACAGCTCGAGGACCGCGCCGATGCTCCACCATACGCCACGCTTGCAAGCGAGCACAACGTCGACCACCTCTTGGTTCATGTCAAGCAGGGTGTCAAAGAGCGCAGGCGGTCATAGTCGGTCTGGCCATGGCGCCGCTGTCGCCAGCGAGGTGGCTCTCTGGGGATTCAAGGGGGCCCGCTTGCCTAGGCCCGTGGCTGCCCCATTACATAGGCCCGTGGCTCCATATCGTTTCAGCACTTGTCGTTGCTACAGCATGAGGGCCACGCTGGCGCCGGAAATGTCGTCGCCTCCATGTCGTCGGAGCTATATGCGAGCCGCACATGACATGCAAGGGTAAAATCGTACTTTCACGGCTATTTCTCTCTATTTCCAACAGCTAATTACCAGTTTTTTGCTGTGGGACAGATACATGGTCTTGCACTGTCTCCTAACTAATTACTTTGCTTTTTCGATGTCCTGTAGGAAATTTTGCCATGGTAAAAGTCCATAATCTGATAGAAAAGTGCCCGCATATCTTAACTAATAAAAAAATTGCTATCCTTCCTATCGTCAACAATTTTTCGTCCGTATGTGCGTTTTTTTTCACTTTCCACCTTTTTTTAGCGCTGCTTTTTTAATCATCCAATCGGACAGAAACACAGATCGAGAACCCTAGAAAAAAGGGGCAAAAGAGAGGAAAAAATCACACAAATGGGCAAGCTTAGAGTCGCCAGATACGGTTGTTCCGAGCTCATTGCCATCGTCGTCCACTGCGCTCGTGTCGTGCCCGAACCAGCCGGGCACGACCACACTTGCCACCTCCCCAACCGCGCTGGCACCCCTTTCCTCTACCACGACGCCCCATCCTCTGGCGCTCTCCTCTTGCTTTAAGGCAGAGGAGAAGAAAGAAGGACGGCCGTCGCCACTGTCTCCGTGCCTAGCCCTGTCATCGAGGTTGATGGGGAGACGGGAAGGGTAAGAGTCGTCATCGTCGCTGTACCTCCGCCATCGCTGCACCACAAGATGGGAGGGACAGGGGGAGATGGAGTGGCGCCGCCGGTGGGGGGAGGGGGGAGGGGGAGGGGGAGCGGCATCGTCGATGGGTGAGGGGGAAGGGGAGCGGTGCCGCCGGTGGGGAGAGGCGCTACCAGTGAGGTAGGGAGAGAAGGAGCGACGGAGGGGGATAGGTGCCGCCGACGCCATCATTTTCAGAGAGAGAGAAGGGGAGGGGAAATAATTTTATAAGATCATAAGGCGGTTTGGATGGTGGTTTTGCCTAACGTGGCGCCTACGTGGCG]
[+] EMBL AK120192 [TGTGCAGCCGCCGATCTCCTTCCAAAATCCGGTCTCCTCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGGAATCCTCTCAATCTCCTCTTCCTTTTCCCCAATAAATCCCCAAAAGTTTCTATGGAAATCCTTTCTAATTTCGCGGATCAATCTTTCCTTTTCCCGGGCGAGGATCCTAAACTTTCCCGGAGTTTTTCCCGTCGATTTGGGCCCGGACCCGAGCTCGCGTGCCTATATAAAGGACCCGCTAGTCGTCCTCTGCCTATCCCCTCAAGTCCCGTCCTTCGCCGAGCCCTAGCCGCCCCTGCCCGCGAGCTCCCTCTCTCTCCACCTCCGGCCGCCGCTCCAGCCGCCGTGCGCCGTCGCCTCGGCCGTCGCCGGTCAGCGCCGACACCTCCCTCGGCTACACAAAGTCGAGCTCTACCCCGGCCTCTGGTTGTTTTGCGCCAAATCCCACCGGAGGTTGCCCGTCGACGTGAAGTGGAGCACCGCCGTCGCCGCCGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCGTCGTCTCCACTGGATTCGCAGCTGCGAGGAGAACACCGTCCACCACCTCTTCTTCGCCAAAGATCGCCGGAACACCGTCGCCATCGTTGACCAGTACCACGTCGCCCTTCGGAGCTCATCGCTGGCCATCTCCTTCGCGGTCCGTCGTCGCGTAAGTGTTGAGTAGCATGTTGAAACCTGGAGAAGAAACTGTGATGAATGAAGTGGTCGACAAGATATTTCGGGCAATGCAGCAACTTCAGAGAGGTCAGTGTTGTTTTGTCACGTCAGCTTGCCGGACGTGGGAAATTTAACTATTTGCCACTCTTGTGACATGGCAATTAACGATTTGCCACGCTCTGTCAATGACACGTGGGCCCTCATGTGTCTATGACATGTGGGCCTAGTGGCAAATCGTTAAGGACCATTCGTAAGAGTGGCAAATAGTTAAAAGCCCCGCCGGACGTAGCTGAAAGATTCAGATTTTGAAAATAAGTTTTGGAGGGTTTATTTTTAAAATTAAATTTTAAAAAGATTAAAAAAATCATGTTTATCAGCTTTTTGCGGTGGTACTGATAACTAGCTGATGGACACTAGCGACATTGTTTTATAATATCCAAATAAAATGAAGAGAGAAACAGTCGCAAAAATACGATATTGCCCTTGCATGCCAAGTCCAGCTCGCATACAGCTCCGACACCACCACCACACCCGCCGCCGCACCCATTGTCACCGTCACCAATGAGGTGGCTCTTCCGGGGGGTTTGAGGGTGGCCCACGCCGCCACGCGCCTGGGCTCGTGGCTCCGTGTCATTCCCGCACTCGTCGCTGCTACAGCTCGAGGACCGCGCCGATGCTCCACCATACGCCACGCTTGCAAGCGAGCACAACGTCGACCACCTCTTGGTTCATGTCAAGCAGGGTGTCAAAGAGCGCAGGCGGTCATAGTCGGTCTGGCCATGGCGCCGCTGTCGCCAGCGAGGTGGCTCTCTGGGGATTCAAGGGGGCCCGCTTGCCTAGGCCCGTGGCTGCCCCATTACATAGGCCCGTGGCTCCATATCGTTTCAGCACTTGTCGTTGCTACAGCATGAGGGCCACGCTGGCGCCGGAAATGTCGTCGCCTCCATGTCGTCGGAGCTATATGCGAGCCGCACATGACATGCAAGGGTAAAATCGTACTTTCACGGCTATTTCTCTCTATTTCCAACAGCTAATTACCAGTTTTTTGCTGTGGGACAGATACATGGTCTTGCACTGTCTCCTAACTAATTACTTTGCTTTTTCGATGTCCTGTAGGAAATTTTGCCATGGTAAAAGTCCATAATCTGATAGAAAAGTGCCCGCATATCTTAACTAATAAAAAAATTGCTATCCTTCCTATCGTCAACAATTTTTCGTCCGTATGTGCGTTTTTTTTCACTTTCCACCTTTTTTTAGCGCTGCTTTTTTAATCATCCAATCGGACAGAAACACAGATCGAGAACCCTAGAAAAAAGGGGCAAAAGAGAGGAAAAAATCACACAAATGGGCAAGCTTAGAGTCGCCAGATACGGTTGTTCCGAGCTCATTGCCATCGTCGTCCACTGCGCTCGTGTCGTGCCCGAACCAGCCGGGCACGACCACACTTGCCACCTCCCCAACCGCGCTGGCACCCCTTTCCTCTACCACGACGCCCCATCCTCTGGCGCTCTCCTCTTGCTTTAAGGCAGAGGAGAAGAAAGAAGGACGGCCGTCGCCACTGTCTCCGTGCCTAGCCCTGTCATCGAGGTTGATGGGGAGACGGGAAGGGTAAGAGTCGTCATCGTCGCTGTACCTCCGCCATCGCTGCACCACAAGATGGGAGGGACAGGGGGAGATGGAGTGGCGCCGCCGGTGGGGGGAGGGGGGAGGGGGAGGGGGAGCGGCATCGTCGATGGGTGAGGGGGAAGGGGAGCGGTGCCGCCGGTGGGGAGAGGCGCTACCAGTGAGGTAGGGAGAGAAGGAGCGACGGAGGGGGATAGGTGCCGCCGACGCCATCATTTTCAGAGAGAGAGAAGGGGAGGGGAAATAATTTTATAAGATCATAAGGCGGTTTGGATGGTGGTTTTGCCTAACGTGGCGCCTACGTGGCG]
consensusID : consensus_7147#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2153 fasta sequence
[CTTCTTCTACCTCTGGACAGAGCCGAGCTCTCCAGCCCGTGCACAGTTGCCGCCGCCTCCTCCTTCCAAATCTGGCCTCCCCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGGAATCCTATCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAAAGTTTCTATAGGAAATCCTTTCCAATTTCGCGGATCAATATTTCCTTTTGCCGGCAAGGATCCTAAACTTTCCCGGAGTTTCTTCCGTCGATTTGGGCCCGGACCCGAGCTCCCGTGCCTATATAAAGCATCCCCTCGTCGTCCTCTACCTAACCCCTCAAGTCCCGTCTTCCGCCGTCGCCGGAATCGCTCTCCCCGGGCTCTCCTTCTCTCTCCAAGCGCCGGCGCCGCTCCAGCCGCATCTCGCCGTCGCCTCGGCCGTCGCCGGTAGCGCCGCCACCTCCCTCGGCTCCGAAAAGTCGATCTCTACCCCGGCCGCTTGTTATTTTGCGCCAAATCCCACCGGAGGTAGCCCGTCGTCGTGAACCGGAGCGCCGCCGTCGTCGCTGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCGTCGTCGCCTTCGGTCGCCGTCGTCTTCATTGGATTCGCAGCTGCAAGCAGAAGACCGTCCACCACCTCTTCTTCGCCAAATATTACCGGAACGCCGTCGCCGTCTTTGACCAGTACCTCGCCGCCTTTCCAAGCTCACTGCCGGCCGTCTGCTGTCTCATCCATCGTCGCGCCACCCCTCGCGTCGTCATCGTCTCTGTGTGGTGTCGTCGGACCATCGCTGGCTTCTTCTCCGGTCGCCGCCGTTTCCTGCTTGTCGTTTCCGTTGTTTCGAAGGTTCGTGAGTGCGTTGTAAGTATCCAAGAAGATTAATTGAAGACCCTTTATTGCAAGTTGAAGAAAAGTTGCAAAGGAGAAGACGTTTGGGTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCTGGATCTTCGCTAGACCTTTGTGTACCTCGGTTGATTCCTGGACGAGGATTTTAATACACAAATTAGTTCGGAAATTACTAGTGAATTTCTGGGCGTGACATGTGTACCAGCTTTGCAACCGGGTGATAAGGCAGTTCGGGAGGCGGCAAACAATCCCGCAAAGATTCTCTACAAGCATCGATCTCCATAAGGTGGACAGAAGGAAAAACAAGAAGACCACCGATTGGACTGCTTATCATCAGACACACATCGATCGATGGGACCAGTTCAAAGCCAACCGCATGCCGGATAACGCAATGCACAATAGGCAAGAGTTCAACGCATACTTAGCCTGGCTCGCGAGGAACTACCGCCTCGCCCTACGTCCGGCTTGGACGCTAGCCGATATAGCGGACAACCTGACTGAGGTGGAGGAGTAGAACGAGTACGATACAAGTACTCGTAGAGGTAGCACGGTCGAGACGGGTCCGGTTCGAGATAGAGTGGCACAAGAGCTAGTCAGGGCAGTGAATGATTTGGGCGTGGCACTTGGCACGCCCCCTAGCTCGCAACAAGAGAGCAGTGTTCTTCAGAATGCCTTACAGACTCTACGACAGCGTTGCAAGAAGTTGGCGGCACGGCTGGGATGCAGGGCCGACGATGCCGTCGAACCACCTCGACGGGCCGAGCAGGGGACAAGTCGAGGAGTGGCTCAAGAGGGTGAACAAGAGGGAGAGGAGGAGGAAGAGGGAGAGGAGGAGGAGGAGGAGGAAGAAGGAGAGGAGGAGGAGGAGGGAGAGGAGGAGGAAGAGGAGGAGCAAGTGGAGCTCGGTCCCTCCTAGCTACAGGATGCTCCACAGTCATCATAGGGGCCATCTCGACCACAGCGCAAGAGAGCTCCTATTTCCGACTGGAGGTACACTCCCAATCAGCCTCGTGCTCCAAGGGGTAGGAAGAAGTAAGTTTTTTTTGGTGGTTTAGTTCGGTAACTTGTGTACTTTATGAAACTCACAACTATACTATGACTTGCAATCCTATATTTTGATGAACCCACAACTATGGTTGTGTTTAGGCTTAAGTCTGTGGATGGATGTGGTTGTGATGGAGCTGGATGTGTATGGATTTTGGATGGATGAATGGTTATGTTTATGGATAGATGGAAGTATATGTCTGTGAATGGATGGATGTATTT]
[+] EMBL AK064275 [CTTCTTCTACCTCTGGACAGAGCCGAGCTCTCCAGCCCGTGCACAGTTGCCGCCGCCTCCTCCTTCCAAATCTGGCCTCCCCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGGAATCCTATCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAAAGTTTCTATAGGAAATCCTTTCCAATTTCGCGGATCAATATTTCCTTTTGCCGGCAAGGATCCTAAACTTTCCCGGAGTTTCTTCCGTCGATTTGGGCCCGGACCCGAGCTCCCGTGCCTATATAAAGCATCCCCTCGTCGTCCTCTACCTAACCCCTCAAGTCCCGTCTTCCGCCGTCGCCGGAATCGCTCTCCCCGGGCTCTCCTTCTCTCTCCAAGCGCCGGCGCCGCTCCAGCCGCATCTCGCCGTCGCCTCGGCCGTCGCCGGTAGCGCCGCCACCTCCCTCGGCTCCGAAAAGTCGATCTCTACCCCGGCCGCTTGTTATTTTGCGCCAAATCCCACCGGAGGTAGCCCGTCGTCGTGAACCGGAGCGCCGCCGTCGTCGCTGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCGTCGTCGCCTTCGGTCGCCGTCGTCTTCATTGGATTCGCAGCTGCAAGCAGAAGACCGTCCACCACCTCTTCTTCGCCAAATATTACCGGAACGCCGTCGCCGTCTTTGACCAGTACCTCGCCGCCTTTCCAAGCTCACTGCCGGCCGTCTGCTGTCTCATCCATCGTCGCGCCACCCCTCGCGTCGTCATCGTCTCTGTGTGGTGTCGTCGGACCATCGCTGGCTTCTTCTCCGGTCGCCGCCGTTTCCTGCTTGTCGTTTCCGTTGTTTCGAAGGTTCGTGAGTGCGTTGTAAGTATCCAAGAAGATTAATTGAAGACCCTTTATTGCAAGTTGAAGAAAAGTTGCAAAGGAGAAGACGTTTGGGTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCTGGATCTTCGCTAGACCTTTGTGTACCTCGGTTGATTCCTGGACGAGGATTTTAATACACAAATTAGTTCGGAAATTACTAGTGAATTTCTGGGCGTGACATGTGTACCAGCTTTGCAACCGGGTGATAAGGCAGTTCGGGAGGCGGCAAACAATCCCGCAAAGATTCTCTACAAGCATCGATCTCCATAAGGTGGACAGAAGGAAAAACAAGAAGACCACCGATTGGACTGCTTATCATCAGACACACATCGATCGATGGGACCAGTTCAAAGCCAACCGCATGCCGGATAACGCAATGCACAATAGGCAAGAGTTCAACGCATACTTAGCCTGGCTCGCGAGGAACTACCGCCTCGCCCTACGTCCGGCTTGGACGCTAGCCGATATAGCGGACAACCTGACTGAGGTGGAGGAGTAGAACGAGTACGATACAAGTACTCGTAGAGGTAGCACGGTCGAGACGGGTCCGGTTCGAGATAGAGTGGCACAAGAGCTAGTCAGGGCAGTGAATGATTTGGGCGTGGCACTTGGCACGCCCCCTAGCTCGCAACAAGAGAGCAGTGTTCTTCAGAATGCCTTACAGACTCTACGACAGCGTTGCAAGAAGTTGGCGGCACGGCTGGGATGCAGGGCCGACGATGCCGTCGAACCACCTCGACGGGCCGAGCAGGGGACAAGTCGAGGAGTGGCTCAAGAGGGTGAACAAGAGGGAGAGGAGGAGGAAGAGGGAGAGGAGGAGGAGGAGGAGGAAGAAGGAGAGGAGGAGGAGGAGGGAGAGGAGGAGGAAGAGGAGGAGCAAGTGGAGCTCGGTCCCTCCTAGCTACAGGATGCTCCACAGTCATCATAGGGGCCATCTCGACCACAGCGCAAGAGAGCTCCTATTTCCGACTGGAGGTACACTCCCAATCAGCCTCGTGCTCCAAGGGGTAGGAAGAAGTAAGTTTTTTTTGGTGGTTTAGTTCGGTAACTTGTGTACTTTATGAAACTCACAACTATACTATGACTTGCAATCCTATATTTTGATGAACCCACAACTATGGTTGTGTTTAGGCTTAAGTCTGTGGATGGATGTGGTTGTGATGGAGCTGGATGTGTATGGATTTTGGATGGATGAATGGTTATGTTTATGGATAGATGGAAGTATATGTCTGTGAATGGATGGATGTATTT]
consensusID : consensus_7147#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 587 fasta sequence
[CAGATCATGAGCATAACCATCCAAACATCAAAAATCCATACACATCCAGTTCCATCACAACCACATCCATCCACAGACTTAAGCCTAAACACAACCATAGTTGTGGGTTCATCAAAATATAAGATTTCAAGTCGCAATATAGTTGTGGGTTTCATAAAGTACACAAGTTACCGAACTAAACCCAACCAAATAAAACTTACTTCTTCCTACCCCTTGGAGCGCAAGGCTGATCGGGAATGTACCTCCAGTCGGAAACAGGAGCTCTCTTGCGCTGTGGTCGAGATGGCCCCTGTGATGACTGTGGAGCGTCCTGCAGCTGGGAGGGACCGAGCTCCACTTGCTCTTCCTCCTCCTCTCCCTCCTCCTCTCCCTCTTCCTCTCCCTCTTCCTCTTGTTCACCCTCTTGAGCCACTCCTCGACTTGTCCCCTGCTCGGCCCGTCGAGGTGGTTCGACGGCATCGTCGGCCCTGCATCCCAGCCGTGCCGCCAACTTCCTGCAACGCTGTCGTAGAGTCTAGTACCAACAGAAGGAAGGAGTTAGTTCCAATTATGTGTATGGTGCATGAATTTACAAATCTACCTATAGG]
[+] EMBL OSA550208 [CAGATCATGAGCATAACCATCCAAACATCAAAAATCCATACACATCCAGTTCCATCACAACCACATCCATCCACAGACTTAAGCCTAAACACAACCATAGTTGTGGGTTCATCAAAATATAAGATTTCAAGTCGCAATATAGTTGTGGGTTTCATAAAGTACACAAGTTACCGAACTAAACCCAACCAAATAAAACTTACTTCTTCCTACCCCTTGGAGCGCAAGGCTGATCGGGAATGTACCTCCAGTCGGAAACAGGAGCTCTCTTGCGCTGTGGTCGAGATGGCCCCTGTGATGACTGTGGAGCGTCCTGCAGCTGGGAGGGACCGAGCTCCACTTGCTCTTCCTCCTCCTCTCCCTCCTCCTCTCCCTCTTCCTCTCCCTCTTCCTCTTGTTCACCCTCTTGAGCCACTCCTCGACTTGTCCCCTGCTCGGCCCGTCGAGGTGGTTCGACGGCATCGTCGGCCCTGCATCCCAGCCGTGCCGCCAACTTCCTGCAACGCTGTCGTAGAGTCTAGTACCAACAGAAGGAAGGAGTTAGTTCCAATTATGTGTATGGTGCATGAATTTACAAATCTACCTATAGG]
consensusID : consensus_7147#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 226 fasta sequence
[CCAGCCGACTGTCTCCCGTGCCGTGCACAGTGCCGCCGATTCCCTTCCAAAATCCGGCCACCTCGTTGCTCCTTTTTCAAAATTAGTTGCGGGAATGGAATCCACTCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAATGTTTCTATGGAAATCCTTTCCAATTTCGCGGTTCAACCTTTCCTTTTTCCGGCGAAGATCTAAACTTTCCCGAGTTTTTCCCG]
[+] EMBL C28535 [CCAGCCGACTGTCTCCCGTGCCGTGCACAGTGCCGCCGATTCCCTTCCAAAATCCGGCCACCTCGTTGCTCCTTTTTCAAAATTAGTTGCGGGAATGGAATCCACTCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAATGTTTCTATGGAAATCCTTTCCAATTTCGCGGTTCAACCTTTCCTTTTTCCGGCGAAGATCTAAACTTTCCCGAGTTTTTCCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7147#1 CTTCTTCTACCTCTGGACAGAGCCGA--GCTCTCCAGCCCGTGCACAGTTGCCGCCGCCT 58
consensus_7147#3 ------------------CCAGCCGACTGTCTCCCGTGCCGTGCACAGT-GCCGCCGATT 41
consensus_7147#0 -----------------------------------------TGTGCA---GCCGCCGATC 16
consensus_7147#2 --------------CAGATCATGAGCATAACCATCCAAACATCAAAAATCCATACACATC 46
* * *
consensus_7147#1 CCTCCTT--CCAAATCTGGCCTCCCCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGG 116
consensus_7147#3 CC-CTTC--CAAAATCCGGCCACCTCGTTGCTCCTTTTTCAAAATTAGTTGCGGGAATGG 98
consensus_7147#0 TC-CTTC--CAAAATCCGGTCTCCTCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGG 73
consensus_7147#2 CAGTTCCATCACAACCACATCCATCCACAGACTTAAGCCTAAACACAACCATAGTTGTGG 106
* ** * * * * ** * * ***
consensus_7147#1 AATCCTATCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAAAGTTTCTATA---GGA 173
consensus_7147#3 AATCCACTCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAATGTTTCTAT----GGA 154
consensus_7147#0 AATCCTCTCAATCTCCTCTTCCTTTTCCCCAATAAATCCCCAAAAGTTTCTAT----GGA 129
consensus_7147#2 GTTCATCAAAATATAAGATTTCAAGTCGC-AATATAGTTGTGGGTTTCATAAAGTACACA 165
** *** * ** * ** * ** * * * * *
consensus_7147#1 AAT--CCTTTCCAATTTCG--CGGATCAATATTTCCTTTTGCCGG--CAAGGATCCTAAA 227
consensus_7147#3 AAT--CCTTTCCAATTTCG--CGGTTCAACCTTTCCTTTTTCCGG--CGAAGATC-TAAA 207
consensus_7147#0 AAT--CCTTTCTAATTTCG--CGGATCAATCTTTCCTTTTCCCGGG-CGAGGATCCTAAA 184
consensus_7147#2 AGTTACCGAACTAAACCCAACCAAATAAAACTTACTTCTTCCTACCCCTTGGAGCGCAAG 225
* * ** * ** * * * ** ** * * ** * * ** * **
consensus_7147#1 CTTTCCCGGAGTTTCTTCCGTCGATTTGGGCCCGGACCCGAGCTCCCGTGCCTATATAAA 287
consensus_7147#3 CTTTCCCG-AGTTTTTCCCG---------------------------------------- 226
consensus_7147#0 CTTTCCCGGAGTTTTTCCCGTCGATTTGGGCCCGGACCCGAGCTCGCGTGCCTATATAAA 244
consensus_7147#2 GCTGATCGGGAATGTACC--TCCAGTCGGAAACAGGAGCTCTCTTGCGCTGTGGTCGAGA 283
* ** * *
consensus_7147#1 GCATCCCCTCGTCGTCCTCTACCTAACCCCTC------AAGTCCCGTCTTCCGCCGTCGC 341
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 GGACCCGCTAGTCGTCCTCTGCCTATCCCCTC------AAGTCCCGTCCTTCGCCGAGCC 298
consensus_7147#2 TGGCCCCTGTGATGACTGTGGAGCGTCCTGCAGCTGGGAGGGACCGAGCTCCACTTGCTC 343
consensus_7147#1 CGGAATCGCTCTCCCCGGGCTCTCCTTCTCTCTCCAAGCGCCGGCGCCGCTCCAGCCGCA 401
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 CTAGCCGCCCCTGCCCGCGAGCTCCCTCTCTCTCCACCTCCGGCCGCCGCTCCAGCCGCC 358
consensus_7147#2 TTCCTCCTCCTCTCCCTCCTCCTCTCCCTCTTCCTCTCCCTCTTCCTCTTGTTCACCCTC 403
consensus_7147#1 TCTCGCCGTCGCCTCGGCCGTCGCCGGT-AGCGCCGCCACCTCCCTCGGCTCCGAAAAGT 460
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 GTGCGCCGTCGCCTCGGCCGTCGCCGGTCAGCGCCGACACCTCCCTCGGCTACACAAAGT 418
consensus_7147#2 TTGAGCCACTCCTCGACTTGTCCCCTGCTCGGCCCGTCGAGGTGGTTCGACGGCATCGTC 463
consensus_7147#1 CGATCTCTACCCCGGCCGCTTGTTATTTTGCGCCAAATCCCACCGGAGGTAGCCCGTCGT 520
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 CGAGCTCTACCCCGGCCTCTGGTTGTTTTGCGCCAAATCCCACCGGAGGTTGCCCGTCGA 478
consensus_7147#2 GGCCCTGCATCCCAGCCGTGCCGCCAACTTCCTGCAACGCTGTCGTAGAGTCTAGTACCA 523
consensus_7147#1 CGTGAACCGGAGCGCCGCCGTCGTCGCTGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCG 580
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 CGTGAAGTGGAGCACCGCCGTCGCCGCCGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCG 538
consensus_7147#2 ACAGAAGGAAGGAGTTAGTTCCAATTATGTGTATGGTGCATGAATTTACAAATCTACCTA 583
consensus_7147#1 TCGTCGCCTTCGGTCGCCGTCGTCTTCATTGGATTCGCAGCTGCAAGCAGAAGACCGTCC 640
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 TCGT-------------------CTCCACTGGATTCGCAGCTGCGAGGAGAACACCGTCC 579
consensus_7147#2 TAGG-------------------------------------------------------- 587
consensus_7147#1 ACCACCTCTTCTTCGCCAAATATTACCGGAACGCCGTCGCCGTCTTTGACCAGTACCTCG 700
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 ACCACCTCTTCTTCGCCAAAGATCGCCGGAACACCGTCGCCATCGTTGACCAGTACCACG 639
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 CCGCCTTTCCAAGCTCACTGCCGGCCGTCTGCTGTCTCATCCATCGTCGCGCCACCCCTC 760
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 TCGCCCTTCGGAGCTCATCGCTGGCCATCTCCTTCGCGGTCCGTCGTCGCGTAAGTGTTG 699
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 -GCGTCGTCATCGTCTCTGTGTGGTGTCGTCGGACCATCGCTGGCTTC-------TTCTC 812
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 AGTAGCATGTTGAAACCTGGAGAAGAAACTGTGATGAATGAAGTGGTCGACAAGATATTT 759
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 CGGTCGCCGCCGTTTCCTGCTTGTCGTTTCCGTTGTTTCGAAGGTTCGTGAGTGCGTTGT 872
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 CGGGCAATGCAGCAACTTCAGAGAGGTCAGTGTTGTTTTGTCA---CGTCAGCTTGCCGG 816
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 AAGTATCCAAGAAGATTAATTGAAGACCCTTTATTGCA--AGTTGAAGAAAAGTTGCAAA 930
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 ACGTGGGAAATTTAACTATTTGCCACTCTTGTGACATGGCAATTAACGATTTGCCACGCT 876
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 --GGAGAAGACGTTTGGGTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCTGGATCT 988
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 CTGTCAATGACACGTGGGCCCTCATGTGTCTATG--ACATGTGGGCCTAGTGGCAAATCG 934
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 TCGCTAGACCTTTGT-------GTACCTCGGTTGATTCCTGGACGAGGAT---TTTAATA 1038
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 TTAAGGACCATTCGTAAGAGTGGCAAATAGTTAAAAGCCCCGCCGGACGTAGCTGAAAGA 994
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 CACAAATTAGTTCGGAAATTACTAGTGAATTT---CTGGGCGTGACATGTGTACCAGCTT 1095
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 TTCAGATTTTGAAAATAAGTTTTGGAGGGTTTATTTTTAAAATTAAATTTTAAAAAGATT 1054
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 TGCAACCGGGTGATAAGGCAGTTCGGGAGGCGGCAAACA-ATCCCGCAAAGATTCTCTAC 1154
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 AAAAAAATCATGTTTATCAGCTTTTTGCGGTGGTACTGATAACTAGCTGATGGACACTAG 1114
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 AAGCATCG---------ATCTCCATAAGGTGGACAGAAGGAAAAACAAGAAGACCACCGA 1205
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 CGACATTGTTTTATAATATCCAAATAAAATGAAGAGAGAAACAGTCGCAAAAATACGATA 1174
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 TTGGACT-GCTTATCA--TCAGACACACATCGATCGATGGGACCAGTTCAAAGCCAACCG 1262
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 TTGCCCTTGCATGCCAAGTCCAGCTCGCATACAGCTCCGACACCACCACCACACCCGCCG 1234
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 C-ATGCCGGATAACGCAATGCACAAT-AGGCAAGAGTTCAACGCATACTTAGCCTGGCTC 1320
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 CCGCACCCATTGTCACCGTCACCAATGAGGTGGCTCTTCCGGGGGGTTTGAGGGTGGCCC 1294
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 GCGAGGAACTACCGCCTCGCCCTACGTCCGGCTTGGACGCTAGCCGATATAGCGG--ACA 1378
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 ACGCCGCCACGC-GCCTGGGCTCGTGGCTCCGTGTCATTCCCGCACTCGTCGCTGCTACA 1353
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ACCTGACTGAGGTGGAGGAGTAGAACGAGTACGATACAAGTACTCGTAGAGGTAGCA-CG 1437
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 GCTCGAGGACCGCGCCGATGCTCCACCA-TACGCCACGCTTGCAAGCGAGCACAACGTCG 1412
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 GTCGAGACGGGTCCGGTTCGAGATAGAGTGGCACAAGAGCTAGTCAGGGCAGTGAATGAT 1497
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 ACCACCTCTTGGTTCATGTCAAGCAGGGTGTCAAAGAGCGCAGGC--GGTCATAGTCGGT 1470
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 TTGGGCGTGGCACTTGGCACGCCCCCTAGCTCGCAACAAGAGAGCAGTGTTCTTCAGAAT 1557
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 CTGGCCATGGCGCCGCTGTCGCCAGCGAGGTGGCTCTCTGGGGATTCAAGGGGGCCCGCT 1530
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 GCCTTACAGACTCTACGACAGCGTTGCAAGAAGTTGGCGGCACGGCTGGGATGCAGGGCC 1617
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 TGCCTAGGCCCGTGGCTGCCCCATTACAT-AGGCCCGTGGCTCCATATCGTTTCAGCACT 1589
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 GACGATGCCGTCGAACCACCTCGACGGGCCGAGCAGGGGACAAGTCGAGGA----GTGGC 1673
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 --TGTCGTTGCTACAGCATGAGGGCCACGCTGGCGCCGGAAATGTCGTCGCCTCCATGTC 1647
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 TCAAGAGG-GTGAACAAGAGGGAGAGGAGGAGGAAGAGGGAGAGGAGGAGGAGGAGGAGG 1732
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 GTCGGAGCTATATGCGAGCCGCACATGACATGCAAGGGTAAAATCGTACTTTCACGGCTA 1707
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 A--------AGAAGGAGAGGAGGAGGAGGAGGGAGAGGAGGAGGAAGAGGAGGAGCAAGT 1784
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 TTTCTCTCTATTTCCAACAGCTAATTACCAGTTTTTTGCTGTGGGACAGATACATGGTCT 1767
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 GGAGCTCGGTCCCTCCTAGCTACAG---------GATGCTCCACAG------TCATCATA 1829
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 TGCACTGTCTCCTAACTAATTACTTTGCTTTTTCGATGTCCTGTAGGAAATTTTGCCATG 1827
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 GGGGCCATCTCGACCACAGCGCAAGAGAGCTCCTATTTCC-GACTGGAGGTACACTCCCA 1888
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 GTAAAAGTCCATAATCTGATAGAAAAGTGCCCGCATATCTTAACTAATAAAAAAATTGCT 1887
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ATCAGCCTCGTGCTCCA-AGGGGTAGGAAGAAGTAAGTTTTTTTTGGTGGTTTAGTTCGG 1947
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 ATCCTTCCTATCGTCAACAATTTTTCGTCCGTATGTGCGTTTTTTTTCACTTTCCACCTT 1947
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 TAACTTGTG-TACTTTATGAAACTCACAACTATACTATGACTTGCAATCCTATATTTTGA 2006
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 TTTTTAGCGCTGCTTTTTTAATCATCCAATCGGACAGAAAC--ACAGATCGAGAACCCTA 2005
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 TGAACCCACAACTATGGTTGTGTTTAGGCTTAAGTCTGTGGATGGATGTGGTTGTGATGG 2066
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 -GAAAAAAGGGGCAAAAGAGAGGAAAAAATCACACAAATGGGCAAGCTTAGAGTCGCCAG 2064
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 AGCTGGATGTGTATGGATTTTGGATGG-ATGAATGGTTATGTTTATGGATAGATGGAAGT 2125
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 ATACGGTTGTTCCGAGCTCATTGCCATCGTCGTCCACTGCGCTCGTGTCGTGCCCGAACC 2124
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ATATGTCTGTGAATGGATGGATGTATTT-------------------------------- 2153
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 AGCCGGGCACGACCACACTTGCCACCTCCCCAACCGCGCTGGCACCCCTTTCCTCTACCA 2184
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ------------------------------------------------------------
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 CGACGCCCCATCCTCTGGCGCTCTCCTCTTGCTTTAAGGCAGAGGAGAAGAAAGAAGGAC 2244
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ------------------------------------------------------------
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 GGCCGTCGCCACTGTCTCCGTGCCTAGCCCTGTCATCGAGGTTGATGGGGAGACGGGAAG 2304
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ------------------------------------------------------------
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 GGTAAGAGTCGTCATCGTCGCTGTACCTCCGCCATCGCTGCACCACAAGATGGGAGGGAC 2364
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ------------------------------------------------------------
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 AGGGGGAGATGGAGTGGCGCCGCCGGTGGGGGGAGGGGGGAGGGGGAGGGGGAGCGGCAT 2424
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ------------------------------------------------------------
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 CGTCGATGGGTGAGGGGGAAGGGGAGCGGTGCCGCCGGTGGGGAGAGGCGCTACCAGTGA 2484
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ------------------------------------------------------------
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 GGTAGGGAGAGAAGGAGCGACGGAGGGGGATAGGTGCCGCCGACGCCATCATTTTCAGAG 2544
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ------------------------------------------------------------
consensus_7147#3 ------------------------------------------------------------
consensus_7147#0 AGAGAGAAGGGGAGGGGAAATAATTTTATAAGATCATAAGGCGGTTTGGATGGTGGTTTT 2604
consensus_7147#2 ------------------------------------------------------------
consensus_7147#1 ------------------------
consensus_7147#3 ------------------------
consensus_7147#0 GCCTAACGTGGCGCCTACGTGGCG 2628
consensus_7147#2 ------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||