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Oryza sativa
cluster # 7151 cluster # 7151       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7151#0 length = 1196 sequences # 4  

consensusID : consensus_7151#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1196
fasta sequence
                              [GCCTTTCCGGACTCGCACACAAAGCACCTCGCTTACGGTTTTTAGCACCCACACACACTCCCGGCCAACATCTCACCACCCCCGAGAGAGAAGGCCGCGCGCCGCGCGCTGCTAGTAGTGCTCGATGGCGATGGTCCCCGCCGACGCCGACGCCGCCGCCAAGCCGCCGCCGGACGTGGAGAAGCCGGACTACAGCTCCCAGAACGGCGCCCCCAACTCGGCCGCCGCCGCCGCCGGGGGGGGCGGCGGCGGCGTGGTGGATTCGGTGGTGGCGCGGTGGCGGCGGGAGGACATGCTCGACAAGAGCCCCCTCGCGCTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCTCGTCGCCTCCAACCAGCACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTATCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGTAGCGTCTAAGTTCAATTTGTGTACTAAATTTTTAGCGTGAGGAATTTATGGGCTAGATTTGTCATTTCTATATTCCTTCTTGGTGGTTGGTTTGTGATCGATTTATGTTAGTACAGTCAGATGTG]

[+] EMBL AK061180             [GCCTTTCCGGACTCGCACACAAAGCACCTCGCTTACGGTTTTTAGCACCCACACACACTCCCGGCCAACATCTCACCACCCCCGAGAGAGAAGGCCGCGCGCCGCGCGCTGCTAGTAGTGCTCGATGGCGATGGTCCCCGCCGACGCCGACGCCGCCGCCAAGCCGCCGCCGGACGTGGAGAAGCCGGACTACAGCTCCCAGAACGGCGCCCCCAACTCGGCCGCCGCCGCCGCCGGGGGGGGCGGCGGCGGCGTGGTGGATTCGGTGGTGGCGCGGTGGCGGCGGGAGGACATGCTCGACAAGAGCCCCCTCGCGCTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCTCGTCGCCTCCAACCAGCACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTATCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGTAGCGTCTAAGTTCAATTTGTGTACTAAATTTTTAGCGTGAGGAATTTATGGGCTAGATTTGTCATTTCTATATTCCTTCTTGGTGGTTGGTTTGTGATCGATTTATGTTAGTACAGTCAGATGTG]
[+] EMBL AK099089             [                        CACCTCGCTTACGGTTTTTAGCACCCACACACACTCCCGGCCAACATCTCACCACCCCCGAGAGAGAAGGCCGCGCGCCGCGCGCTGCTAGTAGTGCTCGATGGCGATGGTCCCCGCCGACGCCGACGCCGCCGCCAAGCCGCCGCCGGACGTGGAGAAGCCGGACTACAGCTCCCAGAACGGCGCCCCCAACTCGGCCGCCGCCGCCGCCGGGGGGGGCGGCGGCGGCGTGGTGGATTCGGTGGTGGCGCGGTGGCGGCGGGAGGACATGCTCGACAAGAGCCCCCTCGCGCTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCTCGTCGCCTCCAACCAGCACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTATCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGTAGCGTCTAAGTTCAATTTGTGTACTAAATTTTTAGCGTGAGGAATTTATGGGCTAGATT                                                                  ]
[+] EMBL CB651764             [                                                                                                                                                                                                                                                                                                        TCGACAAGAGCCCCCTCGCGCTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCTCGTCGCCTCCAACCAGCACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTATCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGT                                                                                                                             ]
[-] EMBL CB651765             [                                                                                                                                                                                                                                                                                                                                                                                                                          AGTACAGGTATCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGTAGCGTCTAAGTTCAATTTGTGTACTAAATTTTTAGCGTGAGGAATTTATGGGCTAGATTTGTCATTTCTATATTCCTTCTTGGTGGTTGGTTTGTGATCGATTTATGTT                ]


>consensus_7151#0 GCCTTTCCGGACTCGCACACAAAGCACCTCGCTTACGGTTTTTAGCACCCACACACACTC CCGGCCAACATCTCACCACCCCCGAGAGAGAAGGCCGCGCGCCGCGCGCTGCTAGTAGTG CTCGATGGCGATGGTCCCCGCCGACGCCGACGCCGCCGCCAAGCCGCCGCCGGACGTGGA GAAGCCGGACTACAGCTCCCAGAACGGCGCCCCCAACTCGGCCGCCGCCGCCGCCGGGGG GGGCGGCGGCGGCGTGGTGGATTCGGTGGTGGCGCGGTGGCGGCGGGAGGACATGCTCGA CAAGAGCCCCCTCGCGCTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCT CGTCGCCTCCAACCAGCACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTA TCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGC TCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTT CGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCAT TACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAAT CAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAA ACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGT GATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGC TGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCT CTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTT CTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGT GAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGTAGCGTCTAA GTTCAATTTGTGTACTAAATTTTTAGCGTGAGGAATTTATGGGCTAGATTTGTCATTTCT ATATTCCTTCTTGGTGGTTGGTTTGTGATCGATTTATGTTAGTACAGTCAGATGTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)