These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7151#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1196 fasta sequence [GCCTTTCCGGACTCGCACACAAAGCACCTCGCTTACGGTTTTTAGCACCCACACACACTCCCGGCCAACATCTCACCACCCCCGAGAGAGAAGGCCGCGCGCCGCGCGCTGCTAGTAGTGCTCGATGGCGATGGTCCCCGCCGACGCCGACGCCGCCGCCAAGCCGCCGCCGGACGTGGAGAAGCCGGACTACAGCTCCCAGAACGGCGCCCCCAACTCGGCCGCCGCCGCCGCCGGGGGGGGCGGCGGCGGCGTGGTGGATTCGGTGGTGGCGCGGTGGCGGCGGGAGGACATGCTCGACAAGAGCCCCCTCGCGCTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCTCGTCGCCTCCAACCAGCACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTATCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGTAGCGTCTAAGTTCAATTTGTGTACTAAATTTTTAGCGTGAGGAATTTATGGGCTAGATTTGTCATTTCTATATTCCTTCTTGGTGGTTGGTTTGTGATCGATTTATGTTAGTACAGTCAGATGTG] [+] EMBL AK061180 [GCCTTTCCGGACTCGCACACAAAGCACCTCGCTTACGGTTTTTAGCACCCACACACACTCCCGGCCAACATCTCACCACCCCCGAGAGAGAAGGCCGCGCGCCGCGCGCTGCTAGTAGTGCTCGATGGCGATGGTCCCCGCCGACGCCGACGCCGCCGCCAAGCCGCCGCCGGACGTGGAGAAGCCGGACTACAGCTCCCAGAACGGCGCCCCCAACTCGGCCGCCGCCGCCGCCGGGGGGGGCGGCGGCGGCGTGGTGGATTCGGTGGTGGCGCGGTGGCGGCGGGAGGACATGCTCGACAAGAGCCCCCTCGCGCTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCTCGTCGCCTCCAACCAGCACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTATCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGTAGCGTCTAAGTTCAATTTGTGTACTAAATTTTTAGCGTGAGGAATTTATGGGCTAGATTTGTCATTTCTATATTCCTTCTTGGTGGTTGGTTTGTGATCGATTTATGTTAGTACAGTCAGATGTG] [+] EMBL AK099089 [ CACCTCGCTTACGGTTTTTAGCACCCACACACACTCCCGGCCAACATCTCACCACCCCCGAGAGAGAAGGCCGCGCGCCGCGCGCTGCTAGTAGTGCTCGATGGCGATGGTCCCCGCCGACGCCGACGCCGCCGCCAAGCCGCCGCCGGACGTGGAGAAGCCGGACTACAGCTCCCAGAACGGCGCCCCCAACTCGGCCGCCGCCGCCGCCGGGGGGGGCGGCGGCGGCGTGGTGGATTCGGTGGTGGCGCGGTGGCGGCGGGAGGACATGCTCGACAAGAGCCCCCTCGCGCTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCTCGTCGCCTCCAACCAGCACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTATCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGTAGCGTCTAAGTTCAATTTGTGTACTAAATTTTTAGCGTGAGGAATTTATGGGCTAGATT ] [+] EMBL CB651764 [ TCGACAAGAGCCCCCTCGCGCTGCACGCGGCCGCCGCGGCGTTCGCCTTCGTCGCGCTCGTGCTCGTCGCCTCCAACCAGCACGGGGACTGGATGGAGTTCGACCGGTACCAGGAGTACAGGTATCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGT ] [-] EMBL CB651765 [ AGTACAGGTATCTGCTCGCGATTGCGGCACTGGCGTTCGCCTACTCGCTCGCGCAGGCGCTGCGGCATGCTCTCCGGATGCGCCGCGGCGTCGACCCCGTCCCGACGGCGTCCGGGCGGCTCCTCGATTTCGCCAGTGATCAGGTAGTCGCATACTTGCTGATGTCTGCTCTCTCTGCTGCTACACCCATTACAAATCGGATGAGATCTGCAGTAATCAACCGCTTCACCGACACGACTGCTGCTGCAATCAGCATGGCCTTCTTGGCATTTGTATCCCTCGCCTTGTCAGCGATAGTTTCTGGATACAAACTCTCCAAACAAACCTACATGTGAAGCATCGTTCTATAGGAGTAAAGCCCATTTCATGTGATCCATTCATCCTGGAGATGCAAGAACTTATGATGACATGAAGGCGTAGTGGTGATTGCTGTTACCTATTGGTAGCTTACACATGTGTACATAAGCTTAGATGCAACATGCCTGAAGCTCTGAAGACCGCAATATTTGTTTAAAATTTGTGCTACCCTTTGACTACCAGAACAACATTTCTGCGGTGATGAGAAGGTGAGAACTGCTTGTTCTGAAGATACAGATAAGTGTACCTATGTGAGCATTTATTGTAGCATCTTTTGTATGTGAGACTGTTATCATTTTATTGTAGCGTCTAAGTTCAATTTGTGTACTAAATTTTTAGCGTGAGGAATTTATGGGCTAGATTTGTCATTTCTATATTCCTTCTTGGTGGTTGGTTTGTGATCGATTTATGTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||