Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7175 cluster # 7175       Sequences # 4       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7175#0 length = 3451 sequences # 1  
consensus_7175#1 length = 1157 sequences # 1  
consensus_7175#2 length = 834 sequences # 1  
consensus_7175#3 length = 755 sequences # 1  

consensusID : consensus_7175#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3451
fasta sequence
                              [CCGATCTCATCTCTTCCCCTCCTCGTCTCGTCGAGAATTCCCCACTTCTCCGTCTCGCCATCGCCGCCGCATCCAAGCCCTAAACCCTCTCCTCTCCTTCTCTCACCCATGGCCGTGGCCACAATTGGCGCCGCAGCAGCCTCCCCATGCCTCCGGCACGTCCACCTGTTAGGGCTTCTGATCGAGGCGCATCCAGGTGTGTAGAGATCTCTGTCGCCGCTCCGCTCCTCGCTGAGGGAGGTATCCGTATCCCTCTTATGCGTGCCTAGAGCGTATGGGGACTCTTGCATTCTCGGGCGGGATCTTGTTTCTAGTGTTGTGATAATCGATGACGTGTGTATTTTTGGACATCCTGCTGCTTTCTGTTTACTCTTTAGCACCGCAGATTTTACTTTTCAAGTCAATAGAGGTGATTAAATAAATTAATTCTGCATACTGCCAAATATATTTATTTTATTGAAGTGTGAAGCGATAAATTACTAGTAGGTCCTTGCAACGGTTGTTTTATTCTCTCTTGATGAAAGGATTAACTTACATGACACAGGCACGCGGCAGTCATTTGGTTGCATTTATTCTCTTTTTCTCATATGCTCATGTATTCTTGTAATGGTTAATTTTTCTTGTTTTGTGGATCCTGTGTGATAGTCTTACAATGAATTTCCGAAATCAGGAAGTAAAGCGAACGAACTGACCTAGGTTATGGTTTTCTCCTGGTATGAAACATAACATGAAGTTAGTTTTGCTGACTTCTTTGGCTTGGCATAGACGTGATATTTCCAGTTTAGGATTGACCATGCTGCTGAGCTCTATGCATAAGTCTATTTGGGTTCTGCCCTTTTGAAGCTGAAAGGCACTGTAGTGTGTAATGATTTTTAAGATCACTCTTATTTCTAAGCAGTAAGAAAAAAAATCATGAAGACAAATGAATGAATTAGTATCTGAATGGAGTCACACATCAAGTTTGACTGGAATGTAGTCACATTATGGTTACACCCTATACTATAATGTTCTAGGGACAACTCCTACGAGTTACCAAAATAAAATAAGCTGAGGCTCTCTAGAAATAGTTAACCTATTTGTGGGAATGCCAGGTGTCAGTATTCTTTGTTGCTGTTATTCATGAGGCTATACCCTATTTACCATGATCTGTAAATGCTATTTTCTCGACTTTATGCTAATATGCATGTATTGCAAGCAAACAATTATTTATTGCAGAGATCAACTAGCCATGCACATATACTAGAAACATGCACGTTTAATTCAAAACAGTGCATTTGTTATTTATGCACTCTCATGACTAAACTATTCTATTAATAAAAACAACTCATGTTTCATATATTGGTCCTGCAAGTAATTGACTATCCCATTTGAGTAGTATGGGAATACCAAAAAAAAAAGAAGGTTCCACCGGGATTTGAACCCAGGTTGCCAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCGGATGTTGTGTTTGGTCTCTTCCTGTTGACATTTCTGTCTTATGTTCCATAAACTCAGTAATGATACAAAATTGTCTTTATCCTTTTTTTAATTGTTTCCATCAGTTATGGCTTCAATGAAACTGTGTTCCTTTTTGAGCATGCATCCAATTAGATACATGCAGAACATGACATTTGTTAAAAAGTTCCATTCATTTAACTTTTTATGGTATAACTTTTTTTGTTGTTTTGTATAATTGTTAAATGCATGACAGTGCATGCTCTCCAATACATAACAGACCTCCGATTTCTGTATAGTCATTTAATGGAATCTTCACAATTAAATCTTGAGTGAAGTTTGATTGCGCTGATGTACACATGTGAACAGAGTGATTATAAGATACGCCAACCACAGTACATAGTCAAATATAATGCACAAAATTAAAATTTGCATTCGTTTTTAAGTTGAAATAGTTGTGAACATGGAGCTGCCTTATGAGGTGGACACATGCCTACAAAATACTTGGATATATGAGTATGTCCCTTATGTGATAGCTACTCTTAGAGTGGTTTAATACTTTTATATACAATGAAAGGGTTGAACCTTACAACATTAACTACTTGTTCTTATTGATATCGTAACCTTGCAGTCGAGAAGTTTCTCTGGGCAAAATTTAAGATGCAAGGAGATATAATGATACTCTTGTCCGATATCACCCTTCAAGTCAAGGTCAAGCTACCTTATACTGACATGATGGTAACAACTTCAGTTACATTTTGTGGAAGGCTTACATTCAAGCCAAAAATGTTACCATCTAGCATCAAAACACAACTGCCATCTCTTTGGTGGAACACTCTTGATGTGGCTCTTCAGGGTAATTAGATGCTTTAATACCAAGAGTGATATGTATGCGATTTTTTATGCTGGTGATGCTAATGGTGTGATGGAAGGTTTGTCAGTAAGGTTGTGGGCTGGAGAAGTTGAGATAGTGAGAAGATCAATAGACTCTGATACCATGAAAGCAGTTATGCCACATGTTGATGCACTGCATTAAACTCTTGCGTGTGAACAAAACTACTATATTTCCTGAATCGTGTATTTGCCCTGCAATCAATTGACTATGCAGATCCCATTTGAGGAGTATGGCAATACCCAAAAAAGAGGTCCCACCGGGATTTGAACCCAGGTTGCCAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCAGGTGAGATAAGACCACAGAGCCAGTCATCGCTATGTCTGAAAGCATATAGACTATTTCCCAGCTGTTTACACCCCGGCAAAACAATGTTCAATCTTATAAGGTGAGATAAGGCCACAGATCCAGCTATCACTATGTCCACAAACATGTGCGAATCCCCAGTTGTTTACTGCACAAATTCACCCCAACAAAACCATGTTTAACCTTGTCAGGTGAGATAAGACTGCATAGCCAGCCATCGCAATGTCCGCAACATGTGAGAAACTGAGAATTCCCTGTTGTTTACCTCACAAGTTCAGCCCATGAAAATCATGGTCATCCTTGTTAGTGTATCAGAAACTCCTTTTCATATTCCAAGGGGTTCACAGTAAACGGTGGAAAAACACAAGGATCAGAACTCAGAACCGCTGCTGTTTGCATTCGGACTTTCAATTTGGAGTAACAGTGTACCTTGCAGGAGCAAAATTGATGCTTCACTGATGCAGCAGCCTCCCTGGAGTTTTGATCGTGGTGTTGTAGACTAAATGGTAGGGCGCATGAGAATATGGGGTGTGGCATGTATGAGGCCTTGTGAAATATGGCTGAGTGAGCCGATGTGTTAGTGCCGTCTTTTAGTTGGCAACATTCTGAGTGAAAATAGCCTATAGAACGTTGCTAGTATATGTTCTTGATAATTGCCTGATACATTGTTCTTGTACTTGTATGCTACTATGCTAGTGCATATCACTTGTCAAATCCATGGAATTTCTTTCCAGTGGAGACTGCACA]

[+] EMBL AK065073             [CCGATCTCATCTCTTCCCCTCCTCGTCTCGTCGAGAATTCCCCACTTCTCCGTCTCGCCATCGCCGCCGCATCCAAGCCCTAAACCCTCTCCTCTCCTTCTCTCACCCATGGCCGTGGCCACAATTGGCGCCGCAGCAGCCTCCCCATGCCTCCGGCACGTCCACCTGTTAGGGCTTCTGATCGAGGCGCATCCAGGTGTGTAGAGATCTCTGTCGCCGCTCCGCTCCTCGCTGAGGGAGGTATCCGTATCCCTCTTATGCGTGCCTAGAGCGTATGGGGACTCTTGCATTCTCGGGCGGGATCTTGTTTCTAGTGTTGTGATAATCGATGACGTGTGTATTTTTGGACATCCTGCTGCTTTCTGTTTACTCTTTAGCACCGCAGATTTTACTTTTCAAGTCAATAGAGGTGATTAAATAAATTAATTCTGCATACTGCCAAATATATTTATTTTATTGAAGTGTGAAGCGATAAATTACTAGTAGGTCCTTGCAACGGTTGTTTTATTCTCTCTTGATGAAAGGATTAACTTACATGACACAGGCACGCGGCAGTCATTTGGTTGCATTTATTCTCTTTTTCTCATATGCTCATGTATTCTTGTAATGGTTAATTTTTCTTGTTTTGTGGATCCTGTGTGATAGTCTTACAATGAATTTCCGAAATCAGGAAGTAAAGCGAACGAACTGACCTAGGTTATGGTTTTCTCCTGGTATGAAACATAACATGAAGTTAGTTTTGCTGACTTCTTTGGCTTGGCATAGACGTGATATTTCCAGTTTAGGATTGACCATGCTGCTGAGCTCTATGCATAAGTCTATTTGGGTTCTGCCCTTTTGAAGCTGAAAGGCACTGTAGTGTGTAATGATTTTTAAGATCACTCTTATTTCTAAGCAGTAAGAAAAAAAATCATGAAGACAAATGAATGAATTAGTATCTGAATGGAGTCACACATCAAGTTTGACTGGAATGTAGTCACATTATGGTTACACCCTATACTATAATGTTCTAGGGACAACTCCTACGAGTTACCAAAATAAAATAAGCTGAGGCTCTCTAGAAATAGTTAACCTATTTGTGGGAATGCCAGGTGTCAGTATTCTTTGTTGCTGTTATTCATGAGGCTATACCCTATTTACCATGATCTGTAAATGCTATTTTCTCGACTTTATGCTAATATGCATGTATTGCAAGCAAACAATTATTTATTGCAGAGATCAACTAGCCATGCACATATACTAGAAACATGCACGTTTAATTCAAAACAGTGCATTTGTTATTTATGCACTCTCATGACTAAACTATTCTATTAATAAAAACAACTCATGTTTCATATATTGGTCCTGCAAGTAATTGACTATCCCATTTGAGTAGTATGGGAATACCAAAAAAAAAAGAAGGTTCCACCGGGATTTGAACCCAGGTTGCCAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCGGATGTTGTGTTTGGTCTCTTCCTGTTGACATTTCTGTCTTATGTTCCATAAACTCAGTAATGATACAAAATTGTCTTTATCCTTTTTTTAATTGTTTCCATCAGTTATGGCTTCAATGAAACTGTGTTCCTTTTTGAGCATGCATCCAATTAGATACATGCAGAACATGACATTTGTTAAAAAGTTCCATTCATTTAACTTTTTATGGTATAACTTTTTTTGTTGTTTTGTATAATTGTTAAATGCATGACAGTGCATGCTCTCCAATACATAACAGACCTCCGATTTCTGTATAGTCATTTAATGGAATCTTCACAATTAAATCTTGAGTGAAGTTTGATTGCGCTGATGTACACATGTGAACAGAGTGATTATAAGATACGCCAACCACAGTACATAGTCAAATATAATGCACAAAATTAAAATTTGCATTCGTTTTTAAGTTGAAATAGTTGTGAACATGGAGCTGCCTTATGAGGTGGACACATGCCTACAAAATACTTGGATATATGAGTATGTCCCTTATGTGATAGCTACTCTTAGAGTGGTTTAATACTTTTATATACAATGAAAGGGTTGAACCTTACAACATTAACTACTTGTTCTTATTGATATCGTAACCTTGCAGTCGAGAAGTTTCTCTGGGCAAAATTTAAGATGCAAGGAGATATAATGATACTCTTGTCCGATATCACCCTTCAAGTCAAGGTCAAGCTACCTTATACTGACATGATGGTAACAACTTCAGTTACATTTTGTGGAAGGCTTACATTCAAGCCAAAAATGTTACCATCTAGCATCAAAACACAACTGCCATCTCTTTGGTGGAACACTCTTGATGTGGCTCTTCAGGGTAATTAGATGCTTTAATACCAAGAGTGATATGTATGCGATTTTTTATGCTGGTGATGCTAATGGTGTGATGGAAGGTTTGTCAGTAAGGTTGTGGGCTGGAGAAGTTGAGATAGTGAGAAGATCAATAGACTCTGATACCATGAAAGCAGTTATGCCACATGTTGATGCACTGCATTAAACTCTTGCGTGTGAACAAAACTACTATATTTCCTGAATCGTGTATTTGCCCTGCAATCAATTGACTATGCAGATCCCATTTGAGGAGTATGGCAATACCCAAAAAAGAGGTCCCACCGGGATTTGAACCCAGGTTGCCAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCAGGTGAGATAAGACCACAGAGCCAGTCATCGCTATGTCTGAAAGCATATAGACTATTTCCCAGCTGTTTACACCCCGGCAAAACAATGTTCAATCTTATAAGGTGAGATAAGGCCACAGATCCAGCTATCACTATGTCCACAAACATGTGCGAATCCCCAGTTGTTTACTGCACAAATTCACCCCAACAAAACCATGTTTAACCTTGTCAGGTGAGATAAGACTGCATAGCCAGCCATCGCAATGTCCGCAACATGTGAGAAACTGAGAATTCCCTGTTGTTTACCTCACAAGTTCAGCCCATGAAAATCATGGTCATCCTTGTTAGTGTATCAGAAACTCCTTTTCATATTCCAAGGGGTTCACAGTAAACGGTGGAAAAACACAAGGATCAGAACTCAGAACCGCTGCTGTTTGCATTCGGACTTTCAATTTGGAGTAACAGTGTACCTTGCAGGAGCAAAATTGATGCTTCACTGATGCAGCAGCCTCCCTGGAGTTTTGATCGTGGTGTTGTAGACTAAATGGTAGGGCGCATGAGAATATGGGGTGTGGCATGTATGAGGCCTTGTGAAATATGGCTGAGTGAGCCGATGTGTTAGTGCCGTCTTTTAGTTGGCAACATTCTGAGTGAAAATAGCCTATAGAACGTTGCTAGTATATGTTCTTGATAATTGCCTGATACATTGTTCTTGTACTTGTATGCTACTATGCTAGTGCATATCACTTGTCAAATCCATGGAATTTCTTTCCAGTGGAGACTGCACA]


>consensus_7175#0 CCGATCTCATCTCTTCCCCTCCTCGTCTCGTCGAGAATTCCCCACTTCTCCGTCTCGCCA TCGCCGCCGCATCCAAGCCCTAAACCCTCTCCTCTCCTTCTCTCACCCATGGCCGTGGCC ACAATTGGCGCCGCAGCAGCCTCCCCATGCCTCCGGCACGTCCACCTGTTAGGGCTTCTG ATCGAGGCGCATCCAGGTGTGTAGAGATCTCTGTCGCCGCTCCGCTCCTCGCTGAGGGAG GTATCCGTATCCCTCTTATGCGTGCCTAGAGCGTATGGGGACTCTTGCATTCTCGGGCGG GATCTTGTTTCTAGTGTTGTGATAATCGATGACGTGTGTATTTTTGGACATCCTGCTGCT TTCTGTTTACTCTTTAGCACCGCAGATTTTACTTTTCAAGTCAATAGAGGTGATTAAATA AATTAATTCTGCATACTGCCAAATATATTTATTTTATTGAAGTGTGAAGCGATAAATTAC TAGTAGGTCCTTGCAACGGTTGTTTTATTCTCTCTTGATGAAAGGATTAACTTACATGAC ACAGGCACGCGGCAGTCATTTGGTTGCATTTATTCTCTTTTTCTCATATGCTCATGTATT CTTGTAATGGTTAATTTTTCTTGTTTTGTGGATCCTGTGTGATAGTCTTACAATGAATTT CCGAAATCAGGAAGTAAAGCGAACGAACTGACCTAGGTTATGGTTTTCTCCTGGTATGAA ACATAACATGAAGTTAGTTTTGCTGACTTCTTTGGCTTGGCATAGACGTGATATTTCCAG TTTAGGATTGACCATGCTGCTGAGCTCTATGCATAAGTCTATTTGGGTTCTGCCCTTTTG AAGCTGAAAGGCACTGTAGTGTGTAATGATTTTTAAGATCACTCTTATTTCTAAGCAGTA AGAAAAAAAATCATGAAGACAAATGAATGAATTAGTATCTGAATGGAGTCACACATCAAG TTTGACTGGAATGTAGTCACATTATGGTTACACCCTATACTATAATGTTCTAGGGACAAC TCCTACGAGTTACCAAAATAAAATAAGCTGAGGCTCTCTAGAAATAGTTAACCTATTTGT GGGAATGCCAGGTGTCAGTATTCTTTGTTGCTGTTATTCATGAGGCTATACCCTATTTAC CATGATCTGTAAATGCTATTTTCTCGACTTTATGCTAATATGCATGTATTGCAAGCAAAC AATTATTTATTGCAGAGATCAACTAGCCATGCACATATACTAGAAACATGCACGTTTAAT TCAAAACAGTGCATTTGTTATTTATGCACTCTCATGACTAAACTATTCTATTAATAAAAA CAACTCATGTTTCATATATTGGTCCTGCAAGTAATTGACTATCCCATTTGAGTAGTATGG GAATACCAAAAAAAAAAGAAGGTTCCACCGGGATTTGAACCCAGGTTGCCAGATTCAAAG TCTGGAGTGCTAACCACTACACTATGGAACCGGATGTTGTGTTTGGTCTCTTCCTGTTGA CATTTCTGTCTTATGTTCCATAAACTCAGTAATGATACAAAATTGTCTTTATCCTTTTTT TAATTGTTTCCATCAGTTATGGCTTCAATGAAACTGTGTTCCTTTTTGAGCATGCATCCA ATTAGATACATGCAGAACATGACATTTGTTAAAAAGTTCCATTCATTTAACTTTTTATGG TATAACTTTTTTTGTTGTTTTGTATAATTGTTAAATGCATGACAGTGCATGCTCTCCAAT ACATAACAGACCTCCGATTTCTGTATAGTCATTTAATGGAATCTTCACAATTAAATCTTG AGTGAAGTTTGATTGCGCTGATGTACACATGTGAACAGAGTGATTATAAGATACGCCAAC CACAGTACATAGTCAAATATAATGCACAAAATTAAAATTTGCATTCGTTTTTAAGTTGAA ATAGTTGTGAACATGGAGCTGCCTTATGAGGTGGACACATGCCTACAAAATACTTGGATA TATGAGTATGTCCCTTATGTGATAGCTACTCTTAGAGTGGTTTAATACTTTTATATACAA TGAAAGGGTTGAACCTTACAACATTAACTACTTGTTCTTATTGATATCGTAACCTTGCAG TCGAGAAGTTTCTCTGGGCAAAATTTAAGATGCAAGGAGATATAATGATACTCTTGTCCG ATATCACCCTTCAAGTCAAGGTCAAGCTACCTTATACTGACATGATGGTAACAACTTCAG TTACATTTTGTGGAAGGCTTACATTCAAGCCAAAAATGTTACCATCTAGCATCAAAACAC AACTGCCATCTCTTTGGTGGAACACTCTTGATGTGGCTCTTCAGGGTAATTAGATGCTTT AATACCAAGAGTGATATGTATGCGATTTTTTATGCTGGTGATGCTAATGGTGTGATGGAA GGTTTGTCAGTAAGGTTGTGGGCTGGAGAAGTTGAGATAGTGAGAAGATCAATAGACTCT GATACCATGAAAGCAGTTATGCCACATGTTGATGCACTGCATTAAACTCTTGCGTGTGAA CAAAACTACTATATTTCCTGAATCGTGTATTTGCCCTGCAATCAATTGACTATGCAGATC CCATTTGAGGAGTATGGCAATACCCAAAAAAGAGGTCCCACCGGGATTTGAACCCAGGTT GCCAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCAGGTGAGATAAGACCA CAGAGCCAGTCATCGCTATGTCTGAAAGCATATAGACTATTTCCCAGCTGTTTACACCCC GGCAAAACAATGTTCAATCTTATAAGGTGAGATAAGGCCACAGATCCAGCTATCACTATG TCCACAAACATGTGCGAATCCCCAGTTGTTTACTGCACAAATTCACCCCAACAAAACCAT GTTTAACCTTGTCAGGTGAGATAAGACTGCATAGCCAGCCATCGCAATGTCCGCAACATG TGAGAAACTGAGAATTCCCTGTTGTTTACCTCACAAGTTCAGCCCATGAAAATCATGGTC ATCCTTGTTAGTGTATCAGAAACTCCTTTTCATATTCCAAGGGGTTCACAGTAAACGGTG GAAAAACACAAGGATCAGAACTCAGAACCGCTGCTGTTTGCATTCGGACTTTCAATTTGG AGTAACAGTGTACCTTGCAGGAGCAAAATTGATGCTTCACTGATGCAGCAGCCTCCCTGG AGTTTTGATCGTGGTGTTGTAGACTAAATGGTAGGGCGCATGAGAATATGGGGTGTGGCA TGTATGAGGCCTTGTGAAATATGGCTGAGTGAGCCGATGTGTTAGTGCCGTCTTTTAGTT GGCAACATTCTGAGTGAAAATAGCCTATAGAACGTTGCTAGTATATGTTCTTGATAATTG CCTGATACATTGTTCTTGTACTTGTATGCTACTATGCTAGTGCATATCACTTGTCAAATC CATGGAATTTCTTTCCAGTGGAGACTGCACA



consensusID : consensus_7175#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1157
fasta sequence
                              [CACTTGACCATCTTCTCCATGCAAATTTTAAGATCAAGTAAAAGTATAATGTGGATTATCACAATTCTTTATTAGCAAGAAAACAAAAACAAGTCTTCTTTAACTCTTGTCATTGTTTAGTTATCTTTTGACAATTTAGTGCTCTGATATTTACTCAAACCTTCTGGACCTTGTTATTGAACTATGCTCAATGATAAAATACTCCCAAGTCCATCCTGAAATTCAGAATCTGCTTTCATATAAAAAAAGAAGCTCACAGCCTCCTCCTGCCTTTAAACAGTAAACGATGAAAAAAGCAGAAGGATCAAAACTCACAACCACTGCTGTTTATCTTGTATTTTGAGAAAAAAGAGCAATAACACTACTACTGACAGGTCAATCTGTCAGCTGCTCGGTACTCTTATAACATCCACAGTAGCAGACTAGAAGTACTCTTATATTATATTTATAACAGCTCATGTTTGATATATTGATCCTGCAAGTATTTGACTATCTCGATCCCATTTGAGGAGTACGGGAATACCTAAAAAAAAACAAAGAAGGTTCCACCGGGATTTGAACACAGGTTGCCAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCGGATGTTGTATGTGGTCCCTTGCAGATGATATTTCTGTCTTATATTCCATAAACACAGTGAAAAGCTGGAAATTTTGTCCATGTCCTTTTGAACTCTTTTTGTTTGTTTCCATCAGTTTAGTTTCAGTGAAACTGTTTCCTTTGAGCATGCATCCAATTAGCATACATGTAACATTTGGTAAAAGGTAAATATTTGTTTGGATCATTTGCTACAACATTTTAGCACTCCGTATAATTATTAAAAGTAATTTTTGACTGTGTATGCTCAGAGAGAGAGAGAGAGAGAGAGTCATCTAATAGAATTTGCAAAATTAAATATTCCAAAGGTTGATTGCGCTGATGTATGTTTGTGAGCAGAGGGATTATGTCATAGTGGGATGCAGTGCATAGTAATCTAATGGTATGTTGAAATAATCTAATGAGGTGAACACATGCACAGAAAATACTGTGGGCATGTCATGTTTAACCTTCTTAGGTAGCTACTTGACAAGCTTCTCCATGCAAATTATAAGATTTGAGTGAAAAATATAATGTGGCTTATAACT]

[+] EMBL AK064942             [CACTTGACCATCTTCTCCATGCAAATTTTAAGATCAAGTAAAAGTATAATGTGGATTATCACAATTCTTTATTAGCAAGAAAACAAAAACAAGTCTTCTTTAACTCTTGTCATTGTTTAGTTATCTTTTGACAATTTAGTGCTCTGATATTTACTCAAACCTTCTGGACCTTGTTATTGAACTATGCTCAATGATAAAATACTCCCAAGTCCATCCTGAAATTCAGAATCTGCTTTCATATAAAAAAAGAAGCTCACAGCCTCCTCCTGCCTTTAAACAGTAAACGATGAAAAAAGCAGAAGGATCAAAACTCACAACCACTGCTGTTTATCTTGTATTTTGAGAAAAAAGAGCAATAACACTACTACTGACAGGTCAATCTGTCAGCTGCTCGGTACTCTTATAACATCCACAGTAGCAGACTAGAAGTACTCTTATATTATATTTATAACAGCTCATGTTTGATATATTGATCCTGCAAGTATTTGACTATCTCGATCCCATTTGAGGAGTACGGGAATACCTAAAAAAAAACAAAGAAGGTTCCACCGGGATTTGAACACAGGTTGCCAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCGGATGTTGTATGTGGTCCCTTGCAGATGATATTTCTGTCTTATATTCCATAAACACAGTGAAAAGCTGGAAATTTTGTCCATGTCCTTTTGAACTCTTTTTGTTTGTTTCCATCAGTTTAGTTTCAGTGAAACTGTTTCCTTTGAGCATGCATCCAATTAGCATACATGTAACATTTGGTAAAAGGTAAATATTTGTTTGGATCATTTGCTACAACATTTTAGCACTCCGTATAATTATTAAAAGTAATTTTTGACTGTGTATGCTCAGAGAGAGAGAGAGAGAGAGAGTCATCTAATAGAATTTGCAAAATTAAATATTCCAAAGGTTGATTGCGCTGATGTATGTTTGTGAGCAGAGGGATTATGTCATAGTGGGATGCAGTGCATAGTAATCTAATGGTATGTTGAAATAATCTAATGAGGTGAACACATGCACAGAAAATACTGTGGGCATGTCATGTTTAACCTTCTTAGGTAGCTACTTGACAAGCTTCTCCATGCAAATTATAAGATTTGAGTGAAAAATATAATGTGGCTTATAACT]


>consensus_7175#1 CACTTGACCATCTTCTCCATGCAAATTTTAAGATCAAGTAAAAGTATAATGTGGATTATC ACAATTCTTTATTAGCAAGAAAACAAAAACAAGTCTTCTTTAACTCTTGTCATTGTTTAG TTATCTTTTGACAATTTAGTGCTCTGATATTTACTCAAACCTTCTGGACCTTGTTATTGA ACTATGCTCAATGATAAAATACTCCCAAGTCCATCCTGAAATTCAGAATCTGCTTTCATA TAAAAAAAGAAGCTCACAGCCTCCTCCTGCCTTTAAACAGTAAACGATGAAAAAAGCAGA AGGATCAAAACTCACAACCACTGCTGTTTATCTTGTATTTTGAGAAAAAAGAGCAATAAC ACTACTACTGACAGGTCAATCTGTCAGCTGCTCGGTACTCTTATAACATCCACAGTAGCA GACTAGAAGTACTCTTATATTATATTTATAACAGCTCATGTTTGATATATTGATCCTGCA AGTATTTGACTATCTCGATCCCATTTGAGGAGTACGGGAATACCTAAAAAAAAACAAAGA AGGTTCCACCGGGATTTGAACACAGGTTGCCAGATTCAAAGTCTGGAGTGCTAACCACTA CACTATGGAACCGGATGTTGTATGTGGTCCCTTGCAGATGATATTTCTGTCTTATATTCC ATAAACACAGTGAAAAGCTGGAAATTTTGTCCATGTCCTTTTGAACTCTTTTTGTTTGTT TCCATCAGTTTAGTTTCAGTGAAACTGTTTCCTTTGAGCATGCATCCAATTAGCATACAT GTAACATTTGGTAAAAGGTAAATATTTGTTTGGATCATTTGCTACAACATTTTAGCACTC CGTATAATTATTAAAAGTAATTTTTGACTGTGTATGCTCAGAGAGAGAGAGAGAGAGAGA GTCATCTAATAGAATTTGCAAAATTAAATATTCCAAAGGTTGATTGCGCTGATGTATGTT TGTGAGCAGAGGGATTATGTCATAGTGGGATGCAGTGCATAGTAATCTAATGGTATGTTG AAATAATCTAATGAGGTGAACACATGCACAGAAAATACTGTGGGCATGTCATGTTTAACC TTCTTAGGTAGCTACTTGACAAGCTTCTCCATGCAAATTATAAGATTTGAGTGAAAAATA TAATGTGGCTTATAACT



consensusID : consensus_7175#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 834
fasta sequence
                              [GTATTGGTAATATTACAATGATCAGTTTGATACAACAATTTATGCAAATATTAAGCGATTCAGCTCATGGTGATGTATTTATGCATTTTTATCTGAATTTTGTTGATGCATTGTATTTCATTATGTAAATGCAATGTATCTGAATTAAGTTGAGTTTTAATTTGTAGAGGACATATGTTGAATAACATTAGACTGACAATCTGTCATTTTTAAGATAACATTTTGTTGGTAGATTGCATTTTACTTTGTTAACACTAGTTACAGTTCACATTTTAATTTATGGAAAATTATTTGTGTAATAACTAGTTGTAGAACAATTTTGTGCTGTTTAATTCTAAACCTATATGTGGGAATGCCATTGTAAATATTCAGGGTTGGTGTTATACATGATGCTGCACTTGTTACCATGACTAAAGTGGTATTTTCTCTTGAGTTGTATGCTCAAAAGCAGTTGCTGCAACCTGCAAGCAAATGATTATTTGTAGTTTAGTTGCATTGCAGATCTGACTTAACCGTGCATAGACTTGATTACTTGAACATGCATGCATTATAACAAAAAACTCATACAGCATGTATTGGCCCTACAACTCTACAAGCAGTTCGCTACACAAATCCCATTTGAGGAGGATGGCAATACCCAAAAAAGAGAGGTCCCACCGGGATTTGAACCCAGGTTGCTAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCGGATGTTATATATTATCCCTTGATGATGACATTTTTGCCTTAAAAGCTGTGTTATTCCCTTGTTTGTTTCCATCAGTTTGGTTTCAGTGAAACTGTGTTCCTTTTGGGCATGCA]

[+] EMBL CB628876             [GTATTGGTAATATTACAATGATCAGTTTGATACAACAATTTATGCAAATATTAAGCGATTCAGCTCATGGTGATGTATTTATGCATTTTTATCTGAATTTTGTTGATGCATTGTATTTCATTATGTAAATGCAATGTATCTGAATTAAGTTGAGTTTTAATTTGTAGAGGACATATGTTGAATAACATTAGACTGACAATCTGTCATTTTTAAGATAACATTTTGTTGGTAGATTGCATTTTACTTTGTTAACACTAGTTACAGTTCACATTTTAATTTATGGAAAATTATTTGTGTAATAACTAGTTGTAGAACAATTTTGTGCTGTTTAATTCTAAACCTATATGTGGGAATGCCATTGTAAATATTCAGGGTTGGTGTTATACATGATGCTGCACTTGTTACCATGACTAAAGTGGTATTTTCTCTTGAGTTGTATGCTCAAAAGCAGTTGCTGCAACCTGCAAGCAAATGATTATTTGTAGTTTAGTTGCATTGCAGATCTGACTTAACCGTGCATAGACTTGATTACTTGAACATGCATGCATTATAACAAAAAACTCATACAGCATGTATTGGCCCTACAACTCTACAAGCAGTTCGCTACACAAATCCCATTTGAGGAGGATGGCAATACCCAAAAAAGAGAGGTCCCACCGGGATTTGAACCCAGGTTGCTAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCGGATGTTATATATTATCCCTTGATGATGACATTTTTGCCTTAAAAGCTGTGTTATTCCCTTGTTTGTTTCCATCAGTTTGGTTTCAGTGAAACTGTGTTCCTTTTGGGCATGCA]


>consensus_7175#2 GTATTGGTAATATTACAATGATCAGTTTGATACAACAATTTATGCAAATATTAAGCGATT CAGCTCATGGTGATGTATTTATGCATTTTTATCTGAATTTTGTTGATGCATTGTATTTCA TTATGTAAATGCAATGTATCTGAATTAAGTTGAGTTTTAATTTGTAGAGGACATATGTTG AATAACATTAGACTGACAATCTGTCATTTTTAAGATAACATTTTGTTGGTAGATTGCATT TTACTTTGTTAACACTAGTTACAGTTCACATTTTAATTTATGGAAAATTATTTGTGTAAT AACTAGTTGTAGAACAATTTTGTGCTGTTTAATTCTAAACCTATATGTGGGAATGCCATT GTAAATATTCAGGGTTGGTGTTATACATGATGCTGCACTTGTTACCATGACTAAAGTGGT ATTTTCTCTTGAGTTGTATGCTCAAAAGCAGTTGCTGCAACCTGCAAGCAAATGATTATT TGTAGTTTAGTTGCATTGCAGATCTGACTTAACCGTGCATAGACTTGATTACTTGAACAT GCATGCATTATAACAAAAAACTCATACAGCATGTATTGGCCCTACAACTCTACAAGCAGT TCGCTACACAAATCCCATTTGAGGAGGATGGCAATACCCAAAAAAGAGAGGTCCCACCGG GATTTGAACCCAGGTTGCTAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACC GGATGTTATATATTATCCCTTGATGATGACATTTTTGCCTTAAAAGCTGTGTTATTCCCT TGTTTGTTTCCATCAGTTTGGTTTCAGTGAAACTGTGTTCCTTTTGGGCATGCA



consensusID : consensus_7175#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 755
fasta sequence
                              [TTTACACCCCGGCAAAACAATGATCAATCTTATAAGGTGAGATAAGGCCACAGATCCAGCTATCACTATGTCCACAAACATGTGCGAATCCCCAGTTGTTTACTGCACAAATTCACCCCAACAAAACCATGTTTAACCTTGTCAGGTGAGATAAGACTAACATGTGAGAAACTGAGAATTCCCTGTTGTTTACCTCACAAGTTCAGCCCATGAAAATCATGGTCATCCTTTTTAGTGTATCAGAAACTCCTTTTTCATATTCCAAGGGGTTCACAGTAAACGGTGGAAAAACACAAGGATCAGAACTCAGAACCGCTGCTGTTTGCATTTTGAGAAGCTAAAAGAGCTAAACAACACTAGCACTGGAGTACACAGGTCACTCTACCGGCTTTTCGGACTTTCAATTTGGAGTAACAGTGTACCTTGCAGGAGCAAAATTGATGCTTCACTGATGCAGCAGCCTCCCTGGAGTTTTGATCGTGGTGTTGTAGACTAAATGGTAGGGCGCATGAGAATATGGGGTGTGGCATGTATGAGGCCTTGTGAAATATGGCTGAGTGAGCCGATGTGTTAGTGCCGTCTTTTAGTTGGCAACATTCTGAGTGAAAATAGCCTATAGAACGTTGCTAGTATATGTTCTTGATAATTGCCTGATACATTGTTCTTGTACTTGTATGCTACTATGCTAGTGCATATCACTTGTCAAATCCATGGAATTTCTTTCCAGTGGAGACTGCACAATGAAGTTCCAATGT]

[-] EMBL CB628877             [TTTACACCCCGGCAAAACAATGATCAATCTTATAAGGTGAGATAAGGCCACAGATCCAGCTATCACTATGTCCACAAACATGTGCGAATCCCCAGTTGTTTACTGCACAAATTCACCCCAACAAAACCATGTTTAACCTTGTCAGGTGAGATAAGACTAACATGTGAGAAACTGAGAATTCCCTGTTGTTTACCTCACAAGTTCAGCCCATGAAAATCATGGTCATCCTTTTTAGTGTATCAGAAACTCCTTTTTCATATTCCAAGGGGTTCACAGTAAACGGTGGAAAAACACAAGGATCAGAACTCAGAACCGCTGCTGTTTGCATTTTGAGAAGCTAAAAGAGCTAAACAACACTAGCACTGGAGTACACAGGTCACTCTACCGGCTTTTCGGACTTTCAATTTGGAGTAACAGTGTACCTTGCAGGAGCAAAATTGATGCTTCACTGATGCAGCAGCCTCCCTGGAGTTTTGATCGTGGTGTTGTAGACTAAATGGTAGGGCGCATGAGAATATGGGGTGTGGCATGTATGAGGCCTTGTGAAATATGGCTGAGTGAGCCGATGTGTTAGTGCCGTCTTTTAGTTGGCAACATTCTGAGTGAAAATAGCCTATAGAACGTTGCTAGTATATGTTCTTGATAATTGCCTGATACATTGTTCTTGTACTTGTATGCTACTATGCTAGTGCATATCACTTGTCAAATCCATGGAATTTCTTTCCAGTGGAGACTGCACAATGAAGTTCCAATGT]


>consensus_7175#3 TTTACACCCCGGCAAAACAATGATCAATCTTATAAGGTGAGATAAGGCCACAGATCCAGC TATCACTATGTCCACAAACATGTGCGAATCCCCAGTTGTTTACTGCACAAATTCACCCCA ACAAAACCATGTTTAACCTTGTCAGGTGAGATAAGACTAACATGTGAGAAACTGAGAATT CCCTGTTGTTTACCTCACAAGTTCAGCCCATGAAAATCATGGTCATCCTTTTTAGTGTAT CAGAAACTCCTTTTTCATATTCCAAGGGGTTCACAGTAAACGGTGGAAAAACACAAGGAT CAGAACTCAGAACCGCTGCTGTTTGCATTTTGAGAAGCTAAAAGAGCTAAACAACACTAG CACTGGAGTACACAGGTCACTCTACCGGCTTTTCGGACTTTCAATTTGGAGTAACAGTGT ACCTTGCAGGAGCAAAATTGATGCTTCACTGATGCAGCAGCCTCCCTGGAGTTTTGATCG TGGTGTTGTAGACTAAATGGTAGGGCGCATGAGAATATGGGGTGTGGCATGTATGAGGCC TTGTGAAATATGGCTGAGTGAGCCGATGTGTTAGTGCCGTCTTTTAGTTGGCAACATTCT GAGTGAAAATAGCCTATAGAACGTTGCTAGTATATGTTCTTGATAATTGCCTGATACATT GTTCTTGTACTTGTATGCTACTATGCTAGTGCATATCACTTGTCAAATCCATGGAATTTC TTTCCAGTGGAGACTGCACAATGAAGTTCCAATGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7175#0      CCGATCTCATCTCTTCCCCTCCTCGTCTCGTCGAGAATTCCCCACTTCTCCGTCTCGCCA 60
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TCGCCGCCGCATCCAAGCCCTAAACCCTCTCCTCTCCTTCTCTCACCCATGGCCGTGGCC 120
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ACAATTGGCGCCGCAGCAGCCTCCCCATGCCTCCGGCACGTCCACCTGTTAGGGCTTCTG 180
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ATCGAGGCGCATCCAGGTGTGTAGAGATCTCTGTCGCCGCTCCGCTCCTCGCTGAGGGAG 240
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      GTATCCGTATCCCTCTTATGCGTGCCTAGAGCGTATGGGGACTCTTGCATTCTCGGGCGG 300
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      GATCTTGTTTCTAGTGTTGTGATAATCGATGACGTGTGTATTTTTGGACATCCTGCTGCT 360
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TTCTGTTTACTCTTTAGCACCGCAGATTTTACTTTTCAAGTCAATAGAGGTGATTAAATA 420
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      AATTAATTCTGCATACTGCCAAATATATTTATTTTATTGAAGTGTGAAGCGATAAATTAC 480
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TAGTAGGTCCTTGCAACGGTTGTTTTATTCTCTCTTGATGAAAGGATTAACTTACATGAC 540
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ACAGGCACGCGGCAGTCATTTGGTTGCATTTATTCTCTTTTTCTCATATGCTCATGTATT 600
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      CTTGTAATGGTTAATTTTTCTTGTTTTGTGGATCCTGTGTGATAGTCTTACAATGAATTT 660
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      CCGAAATCAGGAAGTAAAGCGAACGAACTGACCTAGGTTATGGTTTTCTCCTGGTATGAA 720
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ACATAACATGAAGTTAGTTTTGCTGACTTCTTTGGCTTGGCATAGACGTGATATTTCCAG 780
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TTTAGGATTGACCATGCTGCTGAGCTCTATGCATAAGTCTATTTGGGTTCTGCCCTTTTG 840
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      AAGCTGAAAGGCACTGTAGTGTGTAATGATTTTTAAGATCACTCTTATTTCTAAGCAGTA 900
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      AGAAAAAAAATCATGAAGACAAATGAATGAATTAGTATCTGAATGGAGTCACACATCAAG 960
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TTTGACTGGAATGTAGTCACATTATGGTTACACCCTATACTATAATGTTCTAGGGACAAC 1020
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TCCTACGAGTTACCAAAATAAAATAAGCTGAGGCTCTCTAGAAATAGTTAACCTATTTGT 1080
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      GGGAATGCCAGGTGTCAGTATTCTTTGTTGCTGTTATTCATGAGGCTATACCCTATTTAC 1140
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      CATGATCTGTAAATGCTATTTTCTCGACTTTATGCTAATATGCATGTATTGCAAGCAAAC 1200
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      AATTATTTATTGCAGAGATCAACTAGCCATGCACATATACTAGAAACATGCACGTTTAAT 1260
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TCAAAACAGTGCATTTGTTATTTATGCACTCTCATGACTAAACTATTCTATTAATAAAAA 1320
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      CAACTCATGTTTCATATATTGGTCCTGCAAGTAATTGACTATCCCATTTGAGTAGTATGG 1380
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      GAATACCAAAAAAAAAAGAAGGTTCCACCGGGATTTGAACCCAGGTTGCCAGATTCAAAG 1440
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TCTGGAGTGCTAACCACTACACTATGGAACCGGATGTTGTGTTTGGTCTCTTCCTGTTGA 1500
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      CATTTCTGTCTTATGTTCCATAAACTCAGTAATGATACAAAATTGTCTTTATCCTTTTTT 1560
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TAATTGTTTCCATCAGTTATGGCTTCAATGAAACTGTGTTCCTTTTTGAGCATGCATCCA 1620
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ATTAGATACATGCAGAACATGACATTTGTTAAAAAGTTCCATTCATTTAACTTTTTATGG 1680
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TATAACTTTTTTTGTTGTTTTGTATAATTGTTAAATGCATGACAGTGCATGCTCTCCAAT 1740
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ACATAACAGACCTCCGATTTCTGTATAGTCATTTAATGGAATCTTCACAATTAAATCTTG 1800
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      AGTGAAGTTTGATTGCGCTGATGTACACATGTGAACAGAGTGATTATAAGATACGCCAAC 1860
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      CACAGTACATAGTCAAATATAATGCACAAAATTAAAATTTGCATTCGTTTTTAAGTTGAA 1920
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ATAGTTGTGAACATGGAGCTGCCTTATGAGGTGGACACATGCCTACAAAATACTTGGATA 1980
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TATGAGTATGTCCCTTATGTGATAGCTACTCTTAGAGTGGTTTAATACTTTTATATACAA 2040
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TGAAAGGGTTGAACCTTACAACATTAACTACTTGTTCTTATTGATATCGTAACCTTGCAG 2100
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TCGAGAAGTTTCTCTGGGCAAAATTTAAGATGCAAGGAGATATAATGATACTCTTGTCCG 2160
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ATATCACCCTTCAAGTCAAGGTCAAGCTACCTTATACTGACATGATGGTAACAACTTCAG 2220
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      TTACATTTTGTGGAAGGCTTACATTCAAGCCAAAAATGTTACCATCTAGCATCAAAACAC 2280
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      AACTGCCATCTCTTTGGTGGAACACTCTTGATGTGGCTCTTCAGGGTAATTAGATGCTTT 2340
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      AATACCAAGAGTGATATGTATGCGATTTTTTATGCTGGTGATGCTAATGGTGTGATGGAA 2400
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      GGTTTGTCAGTAAGGTTGTGGGCTGGAGAAGTTGAGATAGTGAGAAGATCAATAGACTCT 2460
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      GATACCATGAAAGCAGTTATGCCACATGTTGATGCACTGCATTAAACTCTTGCGTGTGAA 2520
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      CAAAACTACTATATTTCCTGAATCGTGTATTTGCCCTGCAATCAATTGACTATGCAGATC 2580
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      CCATTTGAGGAGTATGGCAATACCCAAAAAAGAGGTCCCACCGGGATTTGAACCCAGGTT 2640
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      GCCAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCAGGTGAGATAAGACCA 2700
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      ------------------------------------------------------------
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      CAGAGCCAGTCATCGCTATGTCTGAAAGCATATAGACTATTTCCCAGCTGTTTACACCCC 2760
consensus_7175#3      --------------------------------------------------TTTACACCCC 10
consensus_7175#1      ------------------------------------------------------CACTTG 6
consensus_7175#2      --------------------------------GTATTGGTAATATTACAATGATCAGTTT 28
                                                                            **    

consensus_7175#0      GGCAAAACAATG-TTCAATCTTATAAGGTGAGATAAGGCCACAGAT-CCAGCTATCACTA 2818
consensus_7175#3      GGCAAAACAATG-ATCAATCTTATAAGGTGAGATAAGGCCACAGAT-CCAGCTATCACTA 68
consensus_7175#1      ACCATCTTCTCC-ATGCAAATTTTAAGATCAAGTAAAAGTATAATG-TGGATTATCACAA 64
consensus_7175#2      GATACAACAATTTATGCAAATATTAAG--CGATTCAGCTCATGGTGATGTATTTATGCAT 86
                         *          *  *  *  ****      * *    *           *    *  

consensus_7175#0      TGTCCACAAACATGTGCGAATCCCCAGTTGTTTACTGCACAAATTCA-----CCCCAACA 2873
consensus_7175#3      TGTCCACAAACATGTGCGAATCCCCAGTTGTTTACTGCACAAATTCA-----CCCCAACA 123
consensus_7175#1      T-TCTTTATTAGCAAGAAAACAAAAACAAGTCTTCTTTA-ACTCTTG-----TCATTGTT 117
consensus_7175#2      TTTTATCTGAATTTTGTTGATGCATTGTATTTCATTATGTAAATGCAATGTATCTGAATT 146
                      * *            *   *          *    *    *            *      

consensus_7175#0      AAACCATGTTTAACCTTGT--------CAGGTGAGATAAGACTGCATAGCCAGCCATCGC 2925
consensus_7175#3      AAACCATGTTTAACCTTGT--------CAGGTGAGATAAGACT----------------- 158
consensus_7175#1      TAGTTATCTTTTGACAATT--------TAG-TGCTCTGATATT----------TACTCAA 158
consensus_7175#2      AAGTTGAGTTTTAATTTGTAGAGGACATATGTTGAATAACATTAGACTGACAATCTGTCA 206
                       *      ***       *         *  *    * * * *                 

consensus_7175#0      AATGTCCGC----AACATGTGAG-AAACTGAGAATT-CCCTGTTGTTTACCTCACAAGTT 2979
consensus_7175#3      -------------AACATGTGAG-AAACTGAGAATT-CCCTGTTGTTTACCTCACAAGTT 203
consensus_7175#1      ACCTTCTGG----ACCTTGTTATTGAACTATG--CT-CAATGATAAAATACTCCCAAGTC 211
consensus_7175#2      TTTTTAAGATAACATTTTGTTGGTAGATTGCATTTTACTTTGTTAACACTAGTTACAGTT 266
                                   *   ***      * *      * *  ** *            *** 

consensus_7175#0      CAGCCCATGAAAATCATGGTCATCCTTGTTAGTGTATCAGAAACTCCTTTT-CATATTCC 3038
consensus_7175#3      CAGCCCATGAAAATCATGGTCATCCTTTTTAGTGTATCAGAAACTCCTTTTTCATATTCC 263
consensus_7175#1      CATCC--TGAAATTCAGAATCTGCTTTCATATAAAAAAAGAAGCTCACAGC--CTCCTCC 267
consensus_7175#2      CACAT--TTTAATTTATGGAAAA--TTATTTGTGTAATAACTAGTTGTAGAACAATTTTG 322
                      **     *  ** * *         **  *     *  *     *            *  

consensus_7175#0      AAGGGGTTCACAGTAAACG---GTGGAAAAA-CACAAGGATCAGAACTCAGAACCGCTGC 3094
consensus_7175#3      AAGGGGTTCACAGTAAACG---GTGGAAAAA-CACAAGGATCAGAACTCAGAACCGCTGC 319
consensus_7175#1      TGCCTTTAAACAGTAAACG---ATGAAAAAAGCAGAAGGATCAAAACTCACAACCACTGC 324
consensus_7175#2      TGCTGTTTAATTCTAAACCTATATGTGGGAA-TGCCATTGTAAATATTCAGGGTTGGTGT 381
                            *  *   *****     **    **     *   * *  * ***       ** 

consensus_7175#0      TGT---TTGCATT----------------------------------------------- 3104
consensus_7175#3      TGT---TTGCATTTTGAGAAGCTAAAAGAGCTAAACAACACTAGCACTGGAGTACACAGG 376
consensus_7175#1      TGT---TTATCTTGTATTTTGAGAAAAAAGAGCAATAACACTACTACTG------ACAGG 375
consensus_7175#2      TATACATGATGCTGCACTTGTTACCATGACTAAAGTGGTATTTTCTCTTGAGTTGTATGC 441
                      * *   *     *                                               

consensus_7175#0      -----------------CGG-ACTTTCA----ATTTGGAGTAACAGT------GTACCTT 3136
consensus_7175#3      TCACTCTACCGGCTTTTCGG-ACTTTCA----ATTTGGAGTAACAGT------GTACCTT 425
consensus_7175#1      TCAATCTGTCAGCTGCTCGGTACTCTTATAACATCCACAGTAGCAGACTAGAAGTACTCT 435
consensus_7175#2      TCAA--AAGCAGTTGCTGCAACCTGCAAGCAAATGATTATTTGTAGTTTA---GTTGCAT 496
                                            **   *    **    * *   **       **    *

consensus_7175#0      GCAGGAGCAAAATTGATGCTTCAC-----TGATGCAGCAGCCTCCCTGGAGTTTTG--AT 3189
consensus_7175#3      GCAGGAGCAAAATTGATGCTTCAC-----TGATGCAGCAGCCTCCCTGGAGTTTTG--AT 478
consensus_7175#1      TATATTATATTTATAACAGCTCATG--TTTGATATATTGATCCTGCAAGTATTTGACTAT 493
consensus_7175#2      TGCAGATCTGACTTAACCGTGCATAGACTTGATTACTTGAACATGCATGCATTATA--AC 554
                                   * *     **      ****        *   *  *  **     * 

consensus_7175#0      CGTGGTGTTGTAGACTAAATGGTAGGGCGCATGAGAATATGGGGTGTGGCATGTATGAGG 3249
consensus_7175#3      CGTGGTGTTGTAGACTAAATGGTAGGGCGCATGAGAATATGGGGTGTGGCATGTATGAGG 538
consensus_7175#1      CTCGATCCCATTTGAGGAGTACGGGAATACCTAAAAAAAAACAAAGAAGGTTCCACCGGG 553
consensus_7175#2      AAAAAACTCATACAGCATGTATT-GGCCCTACAACTCTACAAGCAGTTCGCTACACAAAT 613
                                *        *    *        *    *      *     *  *     

consensus_7175#0      CCTTGTGAAATATGGCTGAGTGAGCCGATGTGTT-AGTGCCGTCTTTTAGTTGG---CAA 3305
consensus_7175#3      CCTTGTGAAATATGGCTGAGTGAGCCGATGTGTT-AGTGCCGTCTTTTAGTTGG---CAA 594
consensus_7175#1      ATTTG-AACACA-GGTTGCCAGATTCAAAGTCTGGAGTGCTAACCACTACACTA---TGG 608
consensus_7175#2      CCCATTTGAGGAGGATGGCAATACCCAAAAAAGAGAGGTCCCACCGGGATTTGAACCCAG 673
                                 * *   *    *  * *       **  *   *    *           

consensus_7175#0      CATTCTGAGT-GAAAAT--AGCC---TATAGA--ACGTTGCTAGTATATGTTCTTGATA- 3356
consensus_7175#3      CATTCTGAGT-GAAAAT--AGCC---TATAGA--ACGTTGCTAGTATATGTTCTTGATA- 645
consensus_7175#1      AACCGGATGTTGTATGT--GGTCCCTTGCAGATGATATTTCTGTCTTATATTCCATAAAC 666
consensus_7175#2      GTTGCTAGATTCAAAGTCTGGAGTGCTAACCACTACACTATGGAACCGGATGTTATATAT 733
                               *   *  *   *     *    *  *   *           *     * * 

consensus_7175#0      --------ATTGCCTGATACATTGTTCTTGTACTTGTATGCTACTAT-GCTAGTGCATAT 3407
consensus_7175#3      --------ATTGCCTGATACATTGTTCTTGTACTTGTATGCTACTAT-GCTAGTGCATAT 696
consensus_7175#1      -ACAGTGAAAAGCTGGAAATTTTGTCCATGTCCTTTTGAACTCTTTTTGTTTGTTTCCAT 725
consensus_7175#2      TATCCCTTGATGATGACATTTTTGCCTTAAAAGCTGTGTTATTCCCTTGTTTGTTTCCAT 793
                                 *         ***          * *    *    * * * **    **

consensus_7175#0      CACTTGTCAAATCCATGGAATTTCT--TTCCAGTGGAGACTGCACA-------------- 3451
consensus_7175#3      CACTTGTCAAATCCATGGAATTTCT--TTCCAGTGGAGACTGCACAATGAAGTTCCAATG 754
consensus_7175#1      CAGT--TTAGTTTCAGTGAAACTGT--TTCCTTTGAGCATGCATCCAATTAGCATACATG 781
consensus_7175#2      CAGT--TTGGTTTCAGTGAAACTGTGTTCCTTTTGGGCATGCA----------------- 834
                      ** *  *    * **  ***  * *  * *   **   *                     

consensus_7175#0      ------------------------------------------------------------
consensus_7175#3      T----------------------------------------------------------- 755
consensus_7175#1      TAACATTTGGTAAAAGGTAAATATTTGTTTGGATCATTTGCTACAACATTTTAGCACTCC 841
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ------------------------------------------------------------
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      GTATAATTATTAAAAGTAATTTTTGACTGTGTATGCTCAGAGAGAGAGAGAGAGAGAGAG 901
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ------------------------------------------------------------
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      TCATCTAATAGAATTTGCAAAATTAAATATTCCAAAGGTTGATTGCGCTGATGTATGTTT 961
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ------------------------------------------------------------
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      GTGAGCAGAGGGATTATGTCATAGTGGGATGCAGTGCATAGTAATCTAATGGTATGTTGA 1021
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ------------------------------------------------------------
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      AATAATCTAATGAGGTGAACACATGCACAGAAAATACTGTGGGCATGTCATGTTTAACCT 1081
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ------------------------------------------------------------
consensus_7175#3      ------------------------------------------------------------
consensus_7175#1      TCTTAGGTAGCTACTTGACAAGCTTCTCCATGCAAATTATAAGATTTGAGTGAAAAATAT 1141
consensus_7175#2      ------------------------------------------------------------
                                                                                  

consensus_7175#0      ----------------
consensus_7175#3      ----------------
consensus_7175#1      AATGTGGCTTATAACT 1157
consensus_7175#2      ----------------
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)