cluster # 7176

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Oryza sativa
cluster # 7176 cluster # 7176 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7176#0 length = 1615 sequences # 4
consensusID : consensus_7176#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1615
fasta sequence
                              [CCATCTCTAGAACTTTCCATCTCGCCTCCGCCTCCGCCTCCGCCTCCCCCCACCTCCTAAGCTCCAAACCCAAGAAACCCTCCTCCTCCGCCGCCCGCCGCCCAATCCGACCCGCCGGAGCGCGAAGGGAGAAACAGGGCAGCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAGGATGCCGCCGAAGAAGGCAGCGCCATCGAAGGCGGACCTGGCCAAGAAGCAGAAGGTCGTGGAGGACAAGACGTTCGGGCTCAAGAACAAGAACAAGAGCAAGAACGTCCAGAAGTACGTCCAGTCCCTGCATCAGGCCGTCCAGCCCAAGCCCGACCCGACCAAGACCGCCGCCAAGAAGAAGAAGGAGGAGGAGAAGGCGCGCGAGAAGGAACTCAATGATCTATTCAAGGTCGCCGTCAGCCAGCCCAAGGTCCCAGTTGGTGTCGATCCCAAGTCCATAGTGTGTGAATTCTTTAAGGTTGGCCAGTGCCAGAAGGGTTTTAAGTGCAAGTTCTCACATGACCTTAATGTCCAAAGAAAGGGTGAAAAGATTGATATTTACACTGACAAGCGTGATGCAGAAACCATGGAAGACTGGGACCAGGAGACTCTTGAGAAGGTTGTTGCGTCAAAAGGAGCAGAGTACCAGCAGAATAAACCTACTGATATTGTTTGCAAGTACTTTCTTGATGCCGTGGAGAAGAAACAGTACGGTTGGTTTTGGGTTTGCCCAAATGGGGGCAAAGATTGCCACTACAGGCATGCACTTCCACCTGGCTATGTACTGAAGTCCCAAATGAAGGCCTTATTGGAGGAAGAGAGTGAAAAGATTGCTATCGAAGATGAGATTGAAGATCAGCGTAAAAAGGTAAAAACAACAACTCCTATGACCACAGATTTATTCATGGAATGGAAAAGGAAGAAGGCAGAAGAAAGAGAAGCTGGTCTGGCTGCCTTGAGGGCAGAGAGGGCTAAGAATGATCGCATGAGTGGCCGTGAGCTGTTCATGGCTGATTCAAGTGTGTTCGTTGATGATGCTGAAGCATATGATGTATATGAAAGACAGGAAGAATCAGAGGCTAATGAAGAACCGAGCAATAAAAACCAGGATGAGGGGCCAAGTTCATCAACTTCTAATGGCAAGGAGGTGGAAGAGTCCGATGATGAAGATATAAATATTGATGATGACCTGGACATTGATGAGTTAAACGAGCTTGAAGCAAGCCTGTCAAGAACTTCCATTCAGATTCGAGAACCTGGCGAGGGAACATCATCTTGAGCAGTAACACTCTGGACTGGAAGGCCATTGAGAAGTAGAACACCATTTTTGCGCCTTAAATTGCCTACTTGCTTTAGAAACAAAAAAGGTGGAAGGTGGAGCATAGATGCAAGTGCAATTTGTTTCAACCAGACTGATCATCTATCCATGATTAGTGAATGATGCTCAGTGCTGTTATGACATGACAATTGATTTTTTGACGCATCTGCCCTTTATATTATCTTTGCGGGAGTTACGTTGCTACTTGTGAATAACATGACTACTTTTTGGCCTCGTGCACACTATAACCGATTTTTGATGTGAAACATTGCCATAAGT]

[+] EMBL AK106074             [CCATCTCTAGAACTTTCCATCTCGCCTCCGCCTCCGCCTCCGCCTCCCCCCACCTCCTAAGCTCCAAACCCAAGAAACCCTCCTCCTCCGCCGCCCGCCGCCCAATCCGACCCGCCGGAGCGCGAAGGGAGAAACAGGGCAGCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAGGATGCCGCCGAAGAAGGCAGCGCCATCGAAGGCGGACCTGGCCAAGAAGCAGAAGGTCGTGGAGGACAAGACGTTCGGGCTCAAGAACAAGAACAAGAGCAAGAACGTCCAGAAGTACGTCCAGTCCCTGCATCAGGCCGTCCAGCCCAAGCCCGACCCGACCAAGACCGCCGCCAAGAAGAAGAAGGAGGAGGAGAAGGCGCGCGAGAAGGAACTCAATGATCTATTCAAGGTCGCCGTCAGCCAGCCCAAGGTCCCAGTTGGTGTCGATCCCAAGTCCATAGTGTGTGAATTCTTTAAGGTTGGCCAGTGCCAGAAGGGTTTTAAGTGCAAGTTCTCACATGACCTTAATGTCCAAAGAAAGGGTGAAAAGATTGATATTTACACTGACAAGCGTGATGCAGAAACCATGGAAGACTGGGACCAGGAGACTCTTGAGAAGGTTGTTGCGTCAAAAGGAGCAGAGTACCAGCAGAATAAACCTACTGATATTGTTTGCAAGTACTTTCTTGATGCCGTGGAGAAGAAACAGTACGGTTGGTTTTGGGTTTGCCCAAATGGGGGCAAAGATTGCCACTACAGGCATGCACTTCCACCTGGCTATGTACTGAAGTCCCAAATGAAGGCCTTATTGGAGGAAGAGAGTGAAAAGATTGCTATCGAAGATGAGATTGAAGATCAGCGTAAAAAGGTAAAAACAACAACTCCTATGACCACAGATTTATTCATGGAATGGAAAAGGAAGAAGGCAGAAGAAAGAGAAGCTGGTCTGGCTGCCTTGAGGGCAGAGAGGGCTAAGAATGATCGCATGAGTGGCCGTGAGCTGTTCATGGCTGATTCAAGTGTGTTCGTTGATGATGCTGAAGCATATGATGTATATGAAAGACAGGAAGAATCAGAGGCTAATGAAGAACCGAGCAATAAAAACCAGGATGAGGGGCCAAGTTCATCAACTTCTAATGGCAAGGAGGTGGAAGAGTCCGATGATGAAGATATAAATATTGATGATGACCTGGACATTGATGAGTTAAACGAGCTTGAAGCAAGCCTGTCAAGAACTTCCATTCAGATTCGAGAACCTGGCGAGGGAACATCATCTTGAGCAGTAACACTCTGGACTGGAAGGCCATTGAGAAGTAGAACACCATTTTTGCGCCTTAAATTGCCTACTTGCTTTAGAAACAAAAAAGGTGGAAGGTGGAGCATAGATGCAAGTGCAATTTGTTTCAACCAGACTGATCATCTATCCATGATTAGTGAATGATGCTCAGTGCTGTTATGACATGACAATTGATTTTTTGACGCATCTGCCCTTTATATTATCTTTGCGGGAGTTACGTTGCTACTTGTGAATAACATGACTACTTTTTGGCCTCGTGCACACTATAACCGAT                          ]
[+] EMBL AK101559             [                                                    CCTCCTAAGCTCCAAACCCAAGAAACCCTCCTCCTCCGCCGCCCGCCGCCCAATCCGACCCGCCGGAGCGCGAAGGGAGAAACAGGGCAGCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAGGATGCCGCCGAAGAAGGCAGCGCCATCGAAGGCGGACCTGGCCAAGAAGCAGAAGGTCGTGGAGGACAAGACGTTCGGGCTCAAGAACAAGAACAAGAGCAAGAACGTCCAGAAGTACGTCCAGTCCCTGCATCAGGCCGTCCAGCCCAAGCCCGACCCGACCAAGGCCGCCGCCAAGAAGAAGAAGGAGGAGGAGAAGGCGCGCGAGAAGGAACTCAATGATCTATTCAAGGTCGCCGTCAGCCAGCCCAAGGTCCCAGTTGGTGTCGATCCCAAGTCCATAGTGTGTGAATTCTTTAAGGTTGGCCAGTGCCAGAAGGGTTTTAAGTGCAAGTTCTCACATGACCTTAATGTCCAAAGAAAGGGTGAAAAGATTGATATTTACACTGACAAGCGTGATGCAGAAACCATGGAAGACTGGGACCAGGAGACTCTTGAGAAGGTTGTTGCGTCAAAAGGAGCAGAGTACCAGCAGAATAAACCTACTGATATTGTTTGCAAGTACTTTCTTGATGCCGTGGAGAAGAAACAGTACGGTTGGTTTTGGGTTTGCCCAAATGGGGGCAAAGATTGCCACTACAGGCATGCACTTCCACCTGGCTATGTACTGAAGTCCCAAATGAAGGCCTTATTGGAGGAAGAGAGTGAAAAGATTGCTATCGAAGATGAGATTGAAGATCAGCGTAAAAAGGTAAAAACAACAACTCCTATGACCACAGATTTATTCATGGAATGGAAAAGGAAGAAGGCAGAAGAAAGAGAAGCTGGTCTGGCTGCCTTGAGGGCAGAGAGGGCTAAGAATGATCGCATGAGTGGCCGTGAGCTGTTCATGGCTGATTCAAGTGTGTTCGTTGATGATGCTGAAGCATATGATGTATATGAAAGACAGGAAGAATCAGAGGCTAATGAAGAACCGAGCAATAAAAACCAGGATGAGGGGCCAAGTTCATCAACTTCTAATGGCAAGGAGGTGGAAGAGTCCGATGATGAAGATATAAATATTGATGATGACCTGGACATTGATGAGTTAAACGAGCTTGAAGCAAGCCTGTCAAGAACTTCCATTCAGATTCGAGAACCTGGCGAGGGAACATCATCTTGAGCAGTAACACTCTGGACTGGAAGGCCATTGAGAAGTAGAACACCATTTTTGCGCCTTAAATTGCCTACTTGCTTTAGAAACAAAAAAGGTGGAAGGTGGAGCATAGATGCAAGTGCAATTTGTTTCAACCAGACTGATCATCTATCCATGATTAGTGAATGATGCTCAGTGCTGTTATGACATGACAATTGATTTTTTGACGCATCTGCCCTTTATATTATCTTTGCGGGAGTTACGTTGCTACTTGTGAATAACATGACTACTTTTTGGCCTCGTGCACACTATAACCGATTTTTGATGTGAAACATTGCCATAAGT]
[+] EMBL D43536               [                                                                                                                                                                                                        CGCCGAAGAAGGCAGCGCCATCGAAGGCGGACCTGGCCAAGAAGCAGAAGGTCGTGGAGGACAAGACGTTCGNGCTCAAGAACAAGAACAAGAGCAAGAACGTCCAGAAGTACGNCCAGTCCCTGCATCAGGCCGTCCAGCCCAATCCCGACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK058413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAAAGACAGGAAGAATCAGAGGCTAATGAAGAACCGAGCAATAAAAACCAGGATGAGGGGCCAAGTTCATCAACTTCTAATGGCAAGGAGGTGGAAGAGTCCGATGATGAAGATATAAATATTGATGATGACCTGGACATTGATGAGTTAAACGAGCTTGAAGCAAGCCTGTCAAGAACTTCCATTCAGATTCGAGAACCTGGCGAGGGAACATCATCTTGAGCAGTAACACTCTGGACTGGAAGGCCATTGAGAAGTAGAACACCATTTTTGCGCCTTAAATTGCCTACTTG                                                                                                                                                                                                                                                       ]




>consensus_7176#0
CCATCTCTAGAACTTTCCATCTCGCCTCCGCCTCCGCCTCCGCCTCCCCCCACCTCCTAA
GCTCCAAACCCAAGAAACCCTCCTCCTCCGCCGCCCGCCGCCCAATCCGACCCGCCGGAG
CGCGAAGGGAGAAACAGGGCAGCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
AGAAGAAGAAGGGAGGATGCCGCCGAAGAAGGCAGCGCCATCGAAGGCGGACCTGGCCAA
GAAGCAGAAGGTCGTGGAGGACAAGACGTTCGGGCTCAAGAACAAGAACAAGAGCAAGAA
CGTCCAGAAGTACGTCCAGTCCCTGCATCAGGCCGTCCAGCCCAAGCCCGACCCGACCAA
GACCGCCGCCAAGAAGAAGAAGGAGGAGGAGAAGGCGCGCGAGAAGGAACTCAATGATCT
ATTCAAGGTCGCCGTCAGCCAGCCCAAGGTCCCAGTTGGTGTCGATCCCAAGTCCATAGT
GTGTGAATTCTTTAAGGTTGGCCAGTGCCAGAAGGGTTTTAAGTGCAAGTTCTCACATGA
CCTTAATGTCCAAAGAAAGGGTGAAAAGATTGATATTTACACTGACAAGCGTGATGCAGA
AACCATGGAAGACTGGGACCAGGAGACTCTTGAGAAGGTTGTTGCGTCAAAAGGAGCAGA
GTACCAGCAGAATAAACCTACTGATATTGTTTGCAAGTACTTTCTTGATGCCGTGGAGAA
GAAACAGTACGGTTGGTTTTGGGTTTGCCCAAATGGGGGCAAAGATTGCCACTACAGGCA
TGCACTTCCACCTGGCTATGTACTGAAGTCCCAAATGAAGGCCTTATTGGAGGAAGAGAG
TGAAAAGATTGCTATCGAAGATGAGATTGAAGATCAGCGTAAAAAGGTAAAAACAACAAC
TCCTATGACCACAGATTTATTCATGGAATGGAAAAGGAAGAAGGCAGAAGAAAGAGAAGC
TGGTCTGGCTGCCTTGAGGGCAGAGAGGGCTAAGAATGATCGCATGAGTGGCCGTGAGCT
GTTCATGGCTGATTCAAGTGTGTTCGTTGATGATGCTGAAGCATATGATGTATATGAAAG
ACAGGAAGAATCAGAGGCTAATGAAGAACCGAGCAATAAAAACCAGGATGAGGGGCCAAG
TTCATCAACTTCTAATGGCAAGGAGGTGGAAGAGTCCGATGATGAAGATATAAATATTGA
TGATGACCTGGACATTGATGAGTTAAACGAGCTTGAAGCAAGCCTGTCAAGAACTTCCAT
TCAGATTCGAGAACCTGGCGAGGGAACATCATCTTGAGCAGTAACACTCTGGACTGGAAG
GCCATTGAGAAGTAGAACACCATTTTTGCGCCTTAAATTGCCTACTTGCTTTAGAAACAA
AAAAGGTGGAAGGTGGAGCATAGATGCAAGTGCAATTTGTTTCAACCAGACTGATCATCT
ATCCATGATTAGTGAATGATGCTCAGTGCTGTTATGACATGACAATTGATTTTTTGACGC
ATCTGCCCTTTATATTATCTTTGCGGGAGTTACGTTGCTACTTGTGAATAACATGACTAC
TTTTTGGCCTCGTGCACACTATAACCGATTTTTGATGTGAAACATTGCCATAAGT
clustalw multiple alignements is not computed in this case